40S ribosome biogenesis co-factors are essential for gametophyte and embryo development

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40S ribosome biogenesis co-factors are essential for gametophyte and embryo development is …
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scholarly articleQ13442814

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P819ADS bibcode2013PLoSO...854084M
P356DOI10.1371/JOURNAL.PONE.0054084
P932PMC publication ID3559688
P698PubMed publication ID23382868
P5875ResearchGate publication ID235402789

P50authorStefan SimmQ89045071
Enrico SchleiffQ30190796
Markus T BohnsackQ38601144
P2093author name stringRoman Martin
Benjamin L Weis
Sandra Missbach
P2860cites workNob1p is required for cleavage of the 3' end of 18S rRNAQ24554334
The N-terminal PIN domain of the exosome subunit Rrp44 harbors endonuclease activity and tethers Rrp44 to the yeast core exosomeQ24644651
Stable transformation of an Arabidopsis cell suspension culture with firefly luciferase providing a cellular system for analysis of chaperone activity in vivoQ24676074
Structures of the PIN domains of SMG6 and SMG5 reveal a nuclease within the mRNA surveillance complexQ24676384
RNR1, a 3'-5' exoribonuclease belonging to the RNR superfamily, catalyzes 3' maturation of chloroplast ribosomal RNAs in Arabidopsis thaliana.Q24802939
Basic local alignment search toolQ25938991
Structural and functional analysis of the archaeal endonuclease Nob1.Q27676094
Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thalianaQ27860555
RNA helicase Prp43 and its co-factor Pfa1 promote 20 to 18 S rRNA processing catalyzed by the endonuclease Nob1.Q27930041
Rrp5p, a trans-acting factor in yeast ribosome biogenesis, is an RNA-binding protein with a pronounced preference for U-rich sequencesQ27931086
PIN domain of Nob1p is required for D-site cleavage in 20S pre-rRNAQ27933019
The 90S preribosome is a multimodular structure that is assembled through a hierarchical mechanism.Q27933023
A Noc complex specifically involved in the formation and nuclear export of ribosomal 40 S subunitsQ27934368
Ribosome synthesis in Saccharomyces cerevisiaeQ27935371
Functional characterization of Pwp2, a WD family protein essential for the assembly of the 90 S pre-ribosomal particleQ27936916
Nob1 binds the single-stranded cleavage site D at the 3'-end of 18S rRNA with its PIN domainQ27938030
ENP1, an essential gene encoding a nuclear protein that is highly conserved from yeast to humansQ27938782
Enp1, a yeast protein associated with U3 and U14 snoRNAs, is required for pre-rRNA processing and 40S subunit synthesisQ27938963
Quantitative analysis of snoRNA association with pre-ribosomes and release of snR30 by Rok1 helicaseQ27940047
A protocol for efficiently retrieving and characterizing flanking sequence tags (FSTs) in Brachypodium distachyon T-DNA insertional mutantsQ28240938
The post-transcriptional steps of eukaryotic ribosome biogenesisQ28276470
Double fertilization - caught in the actQ28288271
Characterization of a ribonuclease III-like protein required for cleavage of the pre-rRNA in the 3'ETS in ArabidopsisQ28755268
Female Gametophyte DevelopmentQ29398579
Ribosome assembly in eukaryotesQ29615231
Protein trans-acting factors involved in ribosome biogenesis in Saccharomyces cerevisiaeQ29620522
A DEAD-box protein, AtRH36, is essential for female gametophyte development and is involved in rRNA biogenesis in Arabidopsis.Q50557158
The female gametophyte and the endosperm control cell proliferation and differentiation of the seed coat in Arabidopsis.Q50704542
The Arabidopsis eukaryotic translation initiation factor 3, subunit F (AteIF3f), is required for pollen germination and embryogenesis.Q51909031
SLOW WALKER1, essential for gametogenesis in Arabidopsis, encodes a WD40 protein involved in 18S ribosomal RNA biogenesis.Q52046096
Female control of male gamete delivery during fertilization in Arabidopsis thalianaQ73086472
Double fertilization in flowering plants: discovery, study methods and mechanismsQ74210077
Small nucleolar RNAs and pre-rRNA processing in plantsQ74576824
Isolation of total RNA from Arabidopsis thaliana seedsQ74602784
Behavior of vacuoles during microspore and pollen development in Arabidopsis thalianaQ79317522
Immunocytochemical techniques for whole-mount in situ protein localization in plantsQ80092782
Autophagy protein 6 (ATG6) is required for pollen germination in Arabidopsis thalianaQ80566961
AtMPK4 is required for male-specific meiotic cytokinesis in ArabidopsisQ84110095
Characterization of plant eukaryotic translation initiation factor 6 (eIF6) genes: The essential role in embryogenesis and their differential expression in Arabidopsis and riceQ84460561
Chloroplast Omp85 proteins change orientation during evolution.Q30155498
Nuclear/nucleolar GTPase 2 proteins as a subfamily of YlqF/YawG GTPases function in pre-60S ribosomal subunit maturation of mono- and dicotyledonous plantsQ33350397
Target of rapamycin regulates development and ribosomal RNA expression through kinase domain in ArabidopsisQ33350514
The Noc-domain containing C-terminus of Noc4p mediates both formation of the Noc4p-Nop14p submodule and its incorporation into the SSU processomeQ33519530
NOF1 encodes an Arabidopsis protein involved in the control of rRNA expression.Q33705054
Protein-protein interactions within late pre-40S ribosomes.Q33809292
Comparison of the RNA polymerase III transcription machinery in Schizosaccharomyces pombe, Saccharomyces cerevisiae and humanQ33939764
Exceptional segregation of a selectable marker (KanR) in Arabidopsis identifies genes important for gametophytic growth and developmentQ33971292
Arabidopsis thaliana XRN2 is required for primary cleavage in the pre-ribosomal RNA.Q34020217
Maternal control of seed developmentQ34355198
Selection of T-DNA-tagged male and female gametophytic mutants by segregation distortion in Arabidopsis.Q34604466
Development and function of the angiosperm female gametophyte.Q34995445
Eukaryotic initiation factor 6, an evolutionarily conserved regulator of ribosome biogenesis and protein translationQ35212522
Characterization of AtNUC-L1 reveals a central role of nucleolin in nucleolus organization and silencing of AtNUC-L2 gene in ArabidopsisQ35613446
Control of male gametophyte developmentQ35705809
DOMINO1, a member of a small plant-specific gene family, encodes a protein essential for nuclear and nucleolar functionsQ35876382
Degradation of a polyadenylated rRNA maturation by-product involves one of the three RRP6-like proteins in Arabidopsis thalianaQ36540208
Completing the cycle: maternal effects as the missing link in plant life historiesQ37153042
The importance of being essential: EMBRYO-DEFECTIVE genes in ArabidopsisQ37300369
Meiotic and mitotic cell cycle mutants involved in gametophyte development in ArabidopsisQ37613959
Regulation and flexibility of genomic imprinting during seed developmentQ37833397
Deletion of the three distal S1 motifs of Saccharomyces cerevisiae Rrp5p abolishes pre-rRNA processing at site A(2) without reducing the production of functional 40S subunitsQ38333308
A simple and rapid method for the preparation of plant genomic DNA for PCR analysisQ40532355
Transfection and transformation of Agrobacterium tumefaciensQ40925597
The roles of S1 RNA-binding domains in Rrp5's interactions with pre-rRNA.Q42603395
MTR4, a putative RNA helicase and exosome co-factor, is required for proper rRNA biogenesis and development in Arabidopsis thalianaQ42605427
SLOW WALKER2, a NOC1/MAK21 homologue, is essential for coordinated cell cycle progression during female gametophyte development in ArabidopsisQ48068045
The Arabidopsis mutant jason produces unreduced first division restitution male gametes through a parallel/fused spindle mechanism in meiosis II.Q49074626
P275copyright licenseCreative Commons Attribution 4.0 InternationalQ20007257
P6216copyright statuscopyrightedQ50423863
P433issue1
P407language of work or nameEnglishQ1860
P304page(s)e54084
P577publication date2013-01-30
P1433published inPLOS OneQ564954
P1476title40S ribosome biogenesis co-factors are essential for gametophyte and embryo development
P478volume8

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cites work (P2860)
Q90681248Arabidopsis CRL4 Complexes: Surveying Chromatin States and Gene Expression
Q58562205Arabidopsis RIBOSOMAL RNA PROCESSING7 is required for 18S rRNA maturation
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Q38961908Knockdown of NOB1 expression inhibits the malignant transformation of human prostate cancer cells
Q43606285Nucleolar Proteome Analysis and Proteasomal Activity Assays Reveal a Link between Nucleolus and 26S Proteasome in A. thaliana.
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Q38641316SNAIL1 is essential for female gametogenesis in Arabidopsis thaliana.
Q50628610The 60S associated ribosome biogenesis factor LSG1-2 is required for 40S maturation in Arabidopsis thaliana.
Q50546110The DEAD-Box RNA Helicase AtRH7/PRH75 Participates in Pre-rRNA Processing, Plant Development and Cold Tolerance in Arabidopsis.
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Q48245034The plastid outer membrane localized LPTD1 is important for glycerolipid remodelling under phosphate starvation
Q49630500Two Nucleolar Proteins, GDP1 and OLI2, Function As Ribosome Biogenesis Factors and Are Preferentially Involved in Promotion of Leaf Cell Proliferation without Strongly Affecting Leaf Adaxial-Abaxial Patterning in Arabidopsis thaliana
Q41668545WBSCR22/Merm1 is required for late nuclear pre-ribosomal RNA processing and mediates N7-methylation of G1639 in human 18S rRNA
Q35113576atBRX1-1 and atBRX1-2 are involved in an alternative rRNA processing pathway in Arabidopsis thaliana

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