scholarly article | Q13442814 |
P50 | author | Taekjip Ha | Q7674759 |
Timothy M. Lohman | Q7807375 | ||
P2093 | author name string | Alexander G Kozlov | |
P2860 | cites work | SSB as an organizer/mobilizer of genome maintenance complexes | Q79661973 |
Elastic properties of a single-stranded charged homopolymeric ribonucleotide | Q80786214 | ||
Replication Protein A (RPA): The Eukaryotic SSB | Q22066159 | ||
Tyrosine phosphorylation enhances RAD52-mediated annealing by modulating its DNA binding. | Q24318110 | ||
RNA helicases at work: binding and rearranging | Q24603646 | ||
Active and passive mechanisms of helicases | Q24610541 | ||
The single-stranded DNA-binding protein of Escherichia coli | Q24634735 | ||
Single-molecule studies reveal dynamics of DNA unwinding by the ring-shaped T7 helicase | Q24642351 | ||
Direct imaging of human Rad51 nucleoprotein dynamics on individual DNA molecules | Q24654281 | ||
Real-time observation of bacteriophage T4 gp41 helicase reveals an unwinding mechanism | Q24669910 | ||
Crystal structure of the homo-tetrameric DNA binding domain of Escherichia coli single-stranded DNA-binding protein determined by multiwavelength x-ray diffraction on the selenomethionyl protein at 2.9-A resolution | Q24670433 | ||
Characterization of individual polynucleotide molecules using a membrane channel | Q24681325 | ||
NS3 helicase actively separates RNA strands and senses sequence barriers ahead of the opening fork | Q27481047 | ||
Structure of the DNA binding domain of E. coli SSB bound to ssDNA | Q27626150 | ||
Structure of the gene 2.5 protein, a single-stranded DNA binding protein encoded by bacteriophage T7 | Q27633789 | ||
UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke | Q27640956 | ||
Structure of Mycobacterium tuberculosis single-stranded DNA-binding protein. Variability in quaternary structure and its implications | Q27641751 | ||
Mechanism of homologous recombination from the RecA-ssDNA/dsDNA structures | Q27650665 | ||
Single-stranded DNA-binding protein complex from Helicobacter pylori suggests an ssDNA-binding surface | Q27654116 | ||
Rotations of the 2B Sub-domain of E. coli UvrD Helicase/Translocase Coupled to Nucleotide and DNA Binding | Q27670550 | ||
Crystal structure of a replication fork single-stranded DNA binding protein (T4 gp32) complexed to DNA | Q27729794 | ||
Crystal structure of human mitochondrial single-stranded DNA binding protein at 2.4 A resolution | Q27734819 | ||
A single-stranded DNA binding protein required for mitochondrial DNA replication in S. cerevisiae is homologous to E. coli SSB | Q27938802 | ||
Srs2 disassembles Rad51 filaments by a protein-protein interaction triggering ATP turnover and dissociation of Rad51 from DNA. | Q27938895 | ||
Initiation of genetic recombination and recombination-dependent replication | Q28141289 | ||
Slide into action: dynamic shuttling of HIV reverse transcriptase on nucleic acid substrates | Q37278712 | ||
Structural transitions within human Rad51 nucleoprotein filaments. | Q37293375 | ||
SSB protein diffusion on single-stranded DNA stimulates RecA filament formation. | Q37435878 | ||
Stepwise translocation of nucleic acid motors. | Q37671354 | ||
Imaging of single molecule diffusion | Q37680828 | ||
Insight into helicase mechanism and function revealed through single-molecule approaches | Q37777437 | ||
Stopped-flow studies of the kinetics of single-stranded DNA binding and wrapping around the Escherichia coli SSB tetramer | Q38289541 | ||
Escherichia coli single-stranded DNA-binding protein: multiple DNA-binding modes and cooperativities | Q38312769 | ||
Structure of Mycobacterium smegmatis single-stranded DNA-binding protein and a comparative study involving homologus SSBs: biological implications of structural plasticity and variability in quaternary association | Q38323281 | ||
Escherichia coli single-stranded DNA binding protein is mobile on DNA: 1H NMR study of its interaction with oligo- and polynucleotides | Q38353192 | ||
Direct measurements of the stabilization of single-stranded DNA under tension by single-stranded binding proteins | Q38439985 | ||
Changes in the tension in dsDNA alter the conformation of RecA bound to dsDNA-RecA filaments | Q38855351 | ||
Single-stranded DNA binding proteins required for DNA replication | Q39740421 | ||
Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity | Q39750512 | ||
Cytosolic viral sensor RIG-I is a 5'-triphosphate-dependent translocase on double-stranded RNA. | Q39899310 | ||
UvrD helicase, unlike Rep helicase, dismantles RecA nucleoprotein filaments in Escherichia coli. | Q40919283 | ||
5'-Single-stranded/duplex DNA junctions are loading sites for E. coli UvrD translocase | Q41694137 | ||
An absolute method for the determination of the persistence length of native DNA from electron micrographs | Q41726080 | ||
Dynamic structural rearrangements between DNA binding modes of E. coli SSB protein. | Q41844418 | ||
DNA helicase activity of PcrA is not required for the displacement of RecA protein from DNA or inhibition of RecA-mediated strand exchange. | Q41908991 | ||
Processive translocation mechanism of the human Bloom's syndrome helicase along single-stranded DNA. | Q41992667 | ||
A nonuniform stepping mechanism for E. coli UvrD monomer translocation along single-stranded DNA | Q42030386 | ||
Spring-loaded mechanism of DNA unwinding by hepatitis C virus NS3 helicase | Q42159743 | ||
The nature of the force-induced conformation transition of dsDNA studied by using single molecule force spectroscopy | Q43153049 | ||
Mechanism of RecA-mediated homologous recombination revisited by single molecule nanomanipulation. | Q43248578 | ||
Reversible unfolding of single RNA molecules by mechanical force | Q43590684 | ||
Quantitative analysis of the kinetics of end-dependent disassembly of RecA filaments from ssDNA. | Q44082228 | ||
Kinetic mechanism of direct transfer of Escherichia coli SSB tetramers between single-stranded DNA molecules | Q44148069 | ||
Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase | Q44175920 | ||
Single-molecule kinetics of lambda exonuclease reveal base dependence and dynamic disorder | Q44264525 | ||
Salt dependent binding of T4 gene 32 protein to single and double-stranded DNA: single molecule force spectroscopy measurements | Q44823457 | ||
Unzipping mechanism of the double-stranded DNA unwinding by a hexameric helicase: the effect of the 3' arm and the stability of the dsDNA on the unwinding activity of the Escherichia coli DnaB helicase | Q45069464 | ||
Homologous recombination in real time: DNA strand exchange by RecA. | Q46579775 | ||
Repetitive shuttling of a motor protein on DNA. | Q46776457 | ||
Demonstration of unidirectional single-stranded DNA translocation by PcrA helicase: measurement of step size and translocation speed | Q47249752 | ||
Kinetic measurement of the step size of DNA unwinding by Escherichia coli UvrD helicase | Q47315601 | ||
Mechanical measurement of single-molecule binding rates: kinetics of DNA helix-destabilization by T4 gene 32 protein | Q47737307 | ||
Direct observation of multiple pathways of single-stranded DNA stretching. | Q49526400 | ||
MCM forked substrate specificity involves dynamic interaction with the 5'-tail. | Q50664621 | ||
Nonlinear low-force elasticity of single-stranded DNA molecules. | Q51849738 | ||
Two binding modes in Escherichia coli single strand binding protein-single stranded DNA complexes. Modulation by NaCl concentration. | Q52673770 | ||
A motor that makes its own track: helicase unwinding of DNA. | Q53848563 | ||
Observation of a single-beam gradient force optical trap for dielectric particles | Q54197257 | ||
Bacillus stearothermophilus PcrA monomer is a single-stranded DNA translocase but not a processive helicase in vitro. | Q54437963 | ||
Effects of Escherichia coli SSB protein on the single-stranded DNA-dependent ATPase activity of Escherichia coli RecA protein. Evidence that SSB protein facilitates the binding of RecA protein to regions of secondary structure within single-stranded | Q54768170 | ||
Polymer chain statistics and conformational analysis of DNA molecules with bends or sections of different flexibility | Q57367231 | ||
Helix-Coil Kinetics of Individual Polyadenylic Acid Molecules in a Protein Channel | Q57905440 | ||
χ-Sequence recognition and DNA translocation by single RecBCD helicase/nuclease molecules | Q59098644 | ||
Binding mode transitions of Escherichia coli single strand binding protein-single-stranded DNA complexes. Cation, anion, pH, and binding density effects | Q68130424 | ||
Escherichia coli single-strand binding protein forms multiple, distinct complexes with single-stranded DNA | Q68927238 | ||
Visualization of SSB-ssDNA complexes active in the assembly of stable RecA-DNA filaments | Q70415897 | ||
Measurement of lactose repressor-mediated loop formation and breakdown in single DNA molecules | Q72417475 | ||
No sliding during homology search by RecA protein | Q77545299 | ||
Stretching single stranded DNA, a model polyelectrolyte | Q78671406 | ||
Single molecule force spectroscopy of salt-dependent bacteriophage T7 gene 2.5 protein binding to single-stranded DNA | Q79271219 | ||
Replication protein A: a heterotrimeric, single-stranded DNA-binding protein required for eukaryotic DNA metabolism | Q28245231 | ||
VirE2: a unique ssDNA-compacting molecular machine | Q28472239 | ||
Single-molecule analysis reveals the kinetics and physiological relevance of MutL-ssDNA binding | Q28476139 | ||
OB(oligonucleotide/oligosaccharide binding)-fold: common structural and functional solution for non-homologous sequences | Q29620102 | ||
Structure and mechanism of helicases and nucleic acid translocases | Q29620151 | ||
Saccharomyces cerevisiae replication protein A binds to single-stranded DNA in multiple salt-dependent modes | Q30441264 | ||
How directional translocation is regulated in a DNA helicase motor | Q30480704 | ||
Impediment of E. coli UvrD by DNA-destabilizing force reveals a strained-inchworm mechanism of DNA unwinding | Q30485195 | ||
Dynamics of RecA filaments on single-stranded DNA | Q30488763 | ||
Single-molecule analysis reveals differential effect of ssDNA-binding proteins on DNA translocation by XPD helicase | Q30491608 | ||
Direct observation of twisting steps during Rad51 polymerization on DNA. | Q30491797 | ||
Torsional regulation of hRPA-induced unwinding of double-stranded DNA. | Q30495260 | ||
Visualizing helicases unwinding DNA at the single molecule level | Q30495681 | ||
Single-molecule analysis reveals three phases of DNA degradation by an exonuclease | Q30500295 | ||
Electrokinetic trapping at the one nanometer limit. | Q30500817 | ||
High-resolution, single-molecule measurements of biomolecular motion | Q30501806 | ||
Single-molecule assay reveals strand switching and enhanced processivity of UvrD | Q30579543 | ||
Forward and reverse motion of single RecBCD molecules on DNA. | Q30751649 | ||
Processive translocation and DNA unwinding by individual RecBCD enzyme molecules | Q30980458 | ||
Polymerization and mechanical properties of single RecA-DNA filaments | Q31395922 | ||
Biocompatible force sensor with optical readout and dimensions of 6 nm3. | Q33223781 | ||
Extreme conformational diversity in human telomeric DNA | Q33229923 | ||
Microsecond dynamics of protein-DNA interactions: direct observation of the wrapping/unwrapping kinetics of single-stranded DNA around the E. coli SSB tetramer | Q33242508 | ||
Polymer properties of polythymine as revealed by translational diffusion | Q33285129 | ||
Counting RAD51 proteins disassembling from nucleoprotein filaments under tension. | Q33390361 | ||
ILPR G-quadruplexes formed in seconds demonstrate high mechanical stabilities. | Q33401032 | ||
Human Rad52 binds and wraps single-stranded DNA and mediates annealing via two hRad52-ssDNA complexes | Q33524756 | ||
Single-molecule TPM studies on the conversion of human telomeric DNA | Q33795604 | ||
Single-molecule studies of the effect of template tension on T7 DNA polymerase activity. | Q33893261 | ||
Structure and function of hexameric helicases. | Q34019405 | ||
PcrA helicase dismantles RecA filaments by reeling in DNA in uniform steps | Q34144302 | ||
Probing single-stranded DNA conformational flexibility using fluorescence spectroscopy | Q34185396 | ||
The elasticity of a single supercoiled DNA molecule | Q34374724 | ||
Studies on the structure and dynamics of the human telomeric G quadruplex by single-molecule fluorescence resonance energy transfer | Q34382392 | ||
Probing the interaction between two single molecules: fluorescence resonance energy transfer between a single donor and a single acceptor. | Q34387536 | ||
DNA primase acts as a molecular brake in DNA replication | Q34490702 | ||
Analysis of single-molecule FRET trajectories using hidden Markov modeling | Q34536849 | ||
Real-time observation of RecA filament dynamics with single monomer resolution. | Q34556173 | ||
Direct observation of individual RecA filaments assembling on single DNA molecules | Q34567581 | ||
Nanomechanical measurements of the sequence-dependent folding landscapes of single nucleic acid hairpins | Q34597333 | ||
Non-hexameric DNA helicases and translocases: mechanisms and regulation | Q34770065 | ||
Do-it-yourself guide: how to use the modern single-molecule toolkit | Q34782759 | ||
High-throughput single-molecule optofluidic analysis | Q34788307 | ||
The RecA/RAD51 protein drives migration of Holliday junctions via polymerization on DNA. | Q34835783 | ||
Biochemistry of eukaryotic homologous recombination | Q34925302 | ||
Protein induced fluorescence enhancement as a single molecule assay with short distance sensitivity | Q34937813 | ||
SSB functions as a sliding platform that migrates on DNA via reptation. | Q35162915 | ||
Steric exclusion and wrapping of the excluded DNA strand occurs along discrete external binding paths during MCM helicase unwinding. | Q35174785 | ||
Real-time observation of strand exchange reaction with high spatiotemporal resolution | Q35186210 | ||
Escherichia coli DNA helicases: mechanisms of DNA unwinding | Q35225286 | ||
Replication by a single DNA polymerase of a stretched single-stranded DNA | Q35364666 | ||
Single-molecule imaging reveals mechanisms of protein disruption by a DNA translocase | Q35590981 | ||
From RPA to BRCA2: lessons from single-stranded DNA binding by the OB-fold | Q35753202 | ||
Fueling protein DNA interactions inside porous nanocontainers. | Q35921608 | ||
Kinetics of conformational fluctuations in DNA hairpin-loops | Q36206384 | ||
Structure and mechanism of Escherichia coli RecA ATPase | Q36272177 | ||
Escherichia coli single-strand binding protein organizes single-stranded DNA in nucleosome-like units | Q36313556 | ||
Real-time measurements of the nucleation, growth and dissociation of single Rad51-DNA nucleoprotein filaments | Q36328990 | ||
Cooperative binding of ATP and RNA induces a closed conformation in a DEAD box RNA helicase | Q36392919 | ||
Measurement of the salt-dependent stabilization of partially open DNA by Escherichia coli SSB protein | Q36471394 | ||
RecA binding to a single double-stranded DNA molecule: a possible role of DNA conformational fluctuations | Q36523051 | ||
Kinetics and thermodynamics of salt-dependent T7 gene 2.5 protein binding to single- and double-stranded DNA | Q36909335 | ||
Human Rad52-mediated homology search and annealing occurs by continuous interactions between overlapping nucleoprotein complexes | Q37068558 | ||
Single-molecule four-color FRET. | Q37071039 | ||
BLM helicase measures DNA unwound before switching strands and hRPA promotes unwinding reinitiation | Q37105584 | ||
Single-molecule detection of folding and unfolding of the G-quadruplex aptamer in a nanopore nanocavity. | Q37108469 | ||
Advances in single-molecule fluorescence methods for molecular biology | Q37138480 | ||
P304 | page(s) | 295-319 | |
P577 | publication date | 2012-02-23 | |
P1433 | published in | Annual Review of Biophysics | Q4034062 |
P1476 | title | Single-molecule views of protein movement on single-stranded DNA. | |
P478 | volume | 41 |
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