Diversity of CRISPR systems in the euryarchaeal Pyrococcales

scientific article published on 19 February 2013

Diversity of CRISPR systems in the euryarchaeal Pyrococcales is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.4161/RNA.23927
P932PMC publication ID3737323
P698PubMed publication ID23422322
P5875ResearchGate publication ID235668770

P50authorBéatrice Clouet-d'OrvalQ68045145
P2093author name stringCédric Norais
Christine Gaspin
Annick Moisan
P2860cites workA guild of 45 CRISPR-associated (Cas) protein families and multiple CRISPR/Cas subtypes exist in prokaryotic genomesQ21090166
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Complete Genome Sequence of Thermococcus sp. Strain 4557, a Hyperthermophilic Archaeon Isolated from a Deep-Sea Hydrothermal Vent AreaQ22065470
Complete Genome Sequence of the Obligate Piezophilic Hyperthermophilic Archaeon Pyrococcus yayanosii CH1Q22065475
Complete Genome Sequence of the Hyperthermophilic, Piezophilic, Heterotrophic, and Carboxydotrophic Archaeon Thermococcus barophilus MPQ22065479
Metabolic Versatility and Indigenous Origin of the Archaeon Thermococcus sibiricus, Isolated from a Siberian Oil Reservoir, as Revealed by Genome AnalysisQ22065505
Complete genome sequence of the hyperthermophilic archaeon Thermococcus kodakaraensis KOD1 and comparison with Pyrococcus genomesQ22065752
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Sequence- and Structure-Specific RNA Processing by a CRISPR EndonucleaseQ27664403
Interaction of the Cas6 Riboendonuclease with CRISPR RNAs: Recognition and CleavageQ27666877
Structure and Mechanism of the CMR Complex for CRISPR-Mediated Antiviral ImmunityQ27676627
Structure of the Cmr2 Subunit of the CRISPR-Cas RNA Silencing ComplexQ27677966
Crystal structure of Cmr2 suggests a nucleotide cyclase-related enzyme in type III CRISPR-Cas systemsQ27678215
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Genomic sequence of hyperthermophile, Pyrococcus furiosus: implications for physiology and enzymologyQ28201683
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CRISPR interference limits horizontal gene transfer in staphylococci by targeting DNAQ29615786
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The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expressionQ29616445
Evolution and classification of the CRISPR-Cas systemsQ29616645
Isolation and characterization of Thermococcus sibiricus sp. nov. from a Western Siberia high-temperature oil reservoir.Q30651941
Molecular diversity of new Thermococcales isolates from a single area of hydrothermal deep-sea vents as revealed by randomly amplified polymorphic DNA fingerprinting and 16S rRNA gene sequence analysisQ30910575
The rolling-circle plasmid pTN1 from the hyperthermophilic archaeon Thermococcus nautilusQ33296897
Archaeal communities associated with shallow to deep subseafloor sediments of the New Caledonia BasinQ33485503
Two novel families of plasmids from hyperthermophilic archaea encoding new families of replication proteinsQ33559437
Identification of CRISPR and riboswitch related RNAs among novel noncoding RNAs of the euryarchaeon Pyrococcus abyssi.Q33931101
Unification of Cas protein families and a simple scenario for the origin and evolution of CRISPR-Cas systemsQ33960829
CRISPR-Cas systems in bacteria and archaea: versatile small RNAs for adaptive defense and regulationQ34068759
The CRISPR system: small RNA-guided defense in bacteria and archaeaQ34096589
Identification and characterization of E. coli CRISPR-cas promoters and their silencing by H-NS.Q34096920
An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssiQ34182074
Binding and cleavage of CRISPR RNA by Cas6Q34210424
Essential features and rational design of CRISPR RNAs that function with the Cas RAMP module complex to cleave RNAs.Q34245546
Characterization of plasmid pRT1 from Pyrococcus sp. strain JT1.Q34309708
The CRISPRs, they are a-changin': how prokaryotes generate adaptive immunityQ34645309
Prokaryotic silencing (psi)RNAs in Pyrococcus furiosusQ34868607
Short motif sequences determine the targets of the prokaryotic CRISPR defence systemQ34953078
An ssDNA virus infecting archaea: a new lineage of viruses with a membrane envelope.Q34965242
Sequence of plasmid pGT5 from the archaeon Pyrococcus abyssi: evidence for rolling-circle replication in a hyperthermophileQ35608034
Comparative genomic and transcriptional analyses of CRISPR systems across the genus Pyrobaculum.Q36093637
Complete genome sequence of the hyperthermophilic archaeon Thermococcus sp. strain CL1, isolated from a Paralvinella sp. polychaete worm collected from a hydrothermal ventQ36152750
Complete genome sequence of the hyperthermophilic archaeon Pyrococcus sp. strain ST04, isolated from a deep-sea hydrothermal sulfide chimney on the Juan de Fuca RidgeQ36155223
Archaeal β-CASP ribonucleases of the aCPSF1 family are orthologs of the eukaryal CPSF-73 factorQ36559217
CRISPR-based immune systems of the Sulfolobales: complexity and diversityQ37832252
The archeovirusesQ37875200
Archaeal CRISPR-based immune systems: exchangeable functional modulesQ37938333
CRISPR loci reveal networks of gene exchange in archaeaQ37970501
Archaeal viruses--novel, diverse and enigmaticQ38014381
Biochemical and phylogenetic characterization of a novel terrestrial hyperthermophilic archaeon pertaining to the genus Pyrococcus from an Algerian hydrothermal hot springQ39126019
Pyrococcus genome comparison evidences chromosome shuffling-driven evolutionQ39600831
PAV1, the first virus-like particle isolated from a hyperthermophilic euryarchaeote, "Pyrococcus abyssi".Q39775227
pSLA2-M of Streptomyces rochei is a composite linear plasmid characterized by self-defense genes and homology with pSLA2-L.Q42604857
Analysis of the first genome of a hyperthermophilic marine virus-like particle, PAV1, isolated from Pyrococcus abyssiQ42617881
Complete genome sequence of hyperthermophilic Pyrococcus sp. strain NA2, isolated from a deep-sea hydrothermal vent areaQ42793456
Geochemical and microbiological evidence for a hydrogen-based, hyperthermophilic subsurface lithoautotrophic microbial ecosystem (HyperSLiME) beneath an active deep-sea hydrothermal field.Q43016269
pAMT11, a novel plasmid isolated from a Thermococcus sp. strain closely related to the virus-like integrated element TKV1 of the Thermococcus kodakaraensis genomeQ44707157
The SSV1 viral integrase is not essentialQ45011865
TPV1, the first virus isolated from the hyperthermophilic genus ThermococcusQ45361210
Characterization of the multiple CRISPR loci on Streptomyces linear plasmid pSHK1.Q51594787
CRISPR/Cas and Cmr modules, mobility and evolution of adaptive immune systems.Q52422353
Isolation of new plasmids from hyperthermophilic Archaea of the order ThermococcalesQ60134825
P433issue5
P921main subjectCRISPRQ412563
P304page(s)659-670
P577publication date2013-02-19
P1433published inRNA BiologyQ7277167
P1476titleDiversity of CRISPR systems in the euryarchaeal Pyrococcales
P478volume10

Reverse relations

cites work (P2860)
Q92897873CRISPR repeat sequences and relative spacing specify DNA integration by Pyrococcus furiosus Cas1 and Cas2
Q21508512Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems
Q38498286High-Throughput Silencing Using the CRISPR-Cas9 System: A Review of the Benefits and Challenges
Q35089011Sequences spanning the leader-repeat junction mediate CRISPR adaptation to phage in Streptococcus thermophilus
Q42544832Special focus CRISPR-Cas
Q37718200The RNA- and DNA-targeting CRISPR-Cas immune systems of Pyrococcus furiosus

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