Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization

scholarly article

Genomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization is …
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scholarly articleQ13442814

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P819ADS bibcode2009PNAS..106.2874P
P356DOI10.1073/PNAS.0806798106
P932PMC publication ID2636740
P698PubMed publication ID19196979
P5875ResearchGate publication ID23983342

P50authorMargaret F RomineQ30504979
Frank R. CollartQ41555567
Dmitry RodionovQ42712796
Jim K FredricksonQ89446807
Alex S BeliaevQ116774432
Oleg V GeydebrekhtQ121409868
Samantha B ReedQ121409869
P2093author name stringChen Yang
Andrei L Osterman
Xiaoqing Li
Etienne Dervyn
James H Scott
Grigory E Pinchuk
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Transcriptomic and proteomic characterization of the Fur modulon in the metal-reducing bacterium Shewanella oneidensisQ29346670
Vibrio aerogenes sp. nov., a facultatively anaerobic marine bacterium that ferments glucose with gas productionQ30596730
Transport of L-Lactate, D-Lactate, and glycolate by the LldP and GlcA membrane carriers of Escherichia coli.Q34108954
The ion transporter superfamilyQ34279620
Missing genes in metabolic pathways: a comparative genomics approachQ35114448
Three overlapping lct genes involved in L-lactate utilization by Escherichia coliQ36123141
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Utilization of DNA as a sole source of phosphorus, carbon, and energy by Shewanella spp.: ecological and physiological implications for dissimilatory metal reductionQ36482950
Intermediary metabolism of organic matter in the sediments of a eutrophic lake.Q36707164
Comparative genomic reconstruction of transcriptional regulatory networks in bacteriaQ36885037
Bacterial lactate dehydrogenases.Q37066863
Towards environmental systems biology of ShewanellaQ37208297
Domain Organization and a Protease-Sensitive Loop in Eukaryotic Ornithine DecarboxylaseQ38290230
Regulation of the Saccharomyces cerevisiae DLD1 gene encoding the mitochondrial protein D-lactate ferricytochrome c oxidoreductase by HAP1 and HAP2/3/4/5.Q38316715
Characterization of a novel Neisseria meningitidis Fur and iron-regulated operon required for protection from oxidative stress: utility of DNA microarray in the assignment of the biological role of hypothetical genes.Q38334755
Identification of 42 possible cytochrome C genes in the Shewanella oneidensis genome and characterization of six soluble cytochromesQ38342066
Growth of desulfovibrio in lactate or ethanol media low in sulfate in association with H2-utilizing methanogenic bacteriaQ39812639
Cloning of a Neisseria meningitidis gene for L-lactate dehydrogenase (L-LDH): evidence for a second meningococcal L-LDH with different regulationQ39842332
Oxidation of D-lactate and L-lactate by Neisseria meningitidis: purification and cloning of meningococcal D-lactate dehydrogenaseQ39937275
Membrane-bound D-lactate dehydrogenase from Escherichia coli: purification and propertiesQ41003362
Genomic analysis of carbon source metabolism of Shewanella oneidensis MR-1: Predictions versus experimentsQ41669406
Dual role of LldR in regulation of the lldPRD operon, involved in L-lactate metabolism in Escherichia coliQ42003607
A vector for systematic gene inactivation in Bacillus subtilisQ42687685
Systematic discovery of analogous enzymes in thiamin biosynthesisQ44470521
Identification of diverse carbon utilization pathways in Shewanella oneidensis MR-1 via expression profiling.Q46546274
Comparative genomics and experimental characterization of N-acetylglucosamine utilization pathway of Shewanella oneidensisQ46680383
pBBR1MCS: a broad-host-range cloning vectorQ48082899
Primary structure, physicochemical properties, and chemical modification of NAD(+)-dependent D-lactate dehydrogenase. Evidence for the presence of Arg-235, His-303, Tyr-101, and Trp-19 at or near the active siteQ48176805
Microbial production of organic acids in aquitard sediments and its role in aquifer geochemistryQ59071762
[Software for analyzing bacterial genomes]Q73709537
Acetate, lactate, propionate, and isobutyrate as electron donors for iron and sulfate reduction in Arctic marine sediments, SvalbardQ79309494
Bacterial manganese reduction and growth with manganese oxide as the sole electron acceptorQ81131636
P433issue8
P407language of work or nameEnglishQ1860
P921main subjectShewanella oneidensisQ4049396
P304page(s)2874-2879
P577publication date2009-02-05
P1433published inProceedings of the National Academy of Sciences of the United States of AmericaQ1146531
P1476titleGenomic reconstruction of Shewanella oneidensis MR-1 metabolism reveals a previously uncharacterized machinery for lactate utilization
P478volume106

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cites work (P2860)
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