Pathway-based approaches for sequencing-based genome-wide association studies.

scientific article published on 05 May 2013

Pathway-based approaches for sequencing-based genome-wide association studies. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1002/GEPI.21728
P932PMC publication ID3856324
P698PubMed publication ID23650134

P50authorGuodong WuQ84424876
P2093author name stringDegui Zhi
P2860cites workFinding the missing heritability of complex diseasesQ22122198
Multiple Rare Alleles Contribute to Low Plasma Levels of HDL CholesterolQ22337068
From genomics to chemical genomics: new developments in KEGGQ24538628
Targeted capture and massively parallel sequencing of 12 human exomesQ24615381
A map of human genome variation from population-scale sequencingQ24617794
A unified approach to genotype imputation and haplotype-phase inference for large data sets of trios and unrelated individualsQ24644474
ANNOVAR: functional annotation of genetic variants from high-throughput sequencing dataQ29547161
The variant call format and VCFtoolsQ29614172
Personal genomes: The case of the missing heritabilityQ29614582
Missing heritability and strategies for finding the underlying causes of complex diseaseQ29614586
Evolution and functional impact of rare coding variation from deep sequencing of human exomesQ29617587
Methods for detecting associations with rare variants for common diseases: application to analysis of sequence dataQ33359015
GSEA-SNP: applying gene set enrichment analysis to SNP data from genome-wide association studiesQ33375904
A groupwise association test for rare mutations using a weighted sum statisticQ33408787
Associations of IL6 polymorphisms with lung function decline and COPD.Q33808582
A new testing strategy to identify rare variants with either risk or protective effect on diseaseQ33815362
SNP-based pathway enrichment analysis for genome-wide association studiesQ33874378
Leptin receptor polymorphisms and lung function decline in COPDQ33917491
Discovering statistically significant pathways in expression profiling studiesQ33943511
Rare-variant association testing for sequencing data with the sequence kernel association testQ33954046
GSA-SNP: a general approach for gene set analysis of polymorphismsQ33957397
Genome-wide gene and pathway analysis.Q34076975
The empirical power of rare variant association methods: results from sanger sequencing in 1,998 individualsQ34154481
Replication Strategies for Rare Variant Complex Trait Association Studies via Next-Generation SequencingQ34381743
Principal-component analysis for assessment of population stratification in mitochondrial medical geneticsQ34544496
Population sequencing of two endocannabinoid metabolic genes identifies rare and common regulatory variants associated with extreme obesity and metabolite levelQ35167237
Evaluating genetic association among ovarian, breast, and endometrial cancer: evidence for a breast/ovarian cancer relationshipQ35197544
Bayesian analysis of rare variants in genetic association studiesQ35435860
Medical sequencing at the extremes of human body massQ35752505
Using the gene ontology to scan multilevel gene sets for associations in genome wide association studiesQ35846303
A powerful test for multiple rare variants association studies that incorporates sequencing qualitiesQ35922896
Estimation of effect size distribution from genome-wide association studies and implications for future discoveriesQ36191121
Pathway-based approaches for analysis of genomewide association studiesQ36512103
Exome sequencing and the genetic basis of complex traitsQ37056084
Power of deep, all-exon resequencing for discovery of human trait genesQ37129418
Transforming growth factor-beta receptor-3 is associated with pulmonary emphysemaQ37343767
Statistical analysis strategies for association studies involving rare variantsQ37799723
Rare Variant Association Analysis Methods for Complex TraitsQ37806780
Analysing biological pathways in genome-wide association studiesQ37810464
Gene set analysis of genome-wide association studies: methodological issues and perspectivesQ37874759
Methods for detecting and correcting for population stratificationQ37999301
An evaluation of statistical approaches to rare variant analysis in genetic association studiesQ39941009
Linkage strategies for genetically complex traits. I. Multilocus modelsQ40623210
An abundance of rare functional variants in 202 drug target genes sequenced in 14,002 peopleQ43136367
Trend tests for case-control studies of genetic markers: power, sample size and robustnessQ47180831
Environmental and heritable causes of cancer among 9.6 million individuals in the Swedish Family-Cancer DatabaseQ52041429
Heritability of type II (non-insulin-dependent) diabetes mellitus and abnormal glucose tolerance--a population-based twin studyQ54103713
Design of the Lung Health Study: a randomized clinical trial of early intervention for chronic obstructive pulmonary diseaseQ54243123
Resequencing of 200 human exomes identifies an excess of low-frequency non-synonymous coding variantsQ57087763
Transforming growth factor-beta1 polymorphisms, airway responsiveness and lung function decline in smokersQ79312647
P433issue5
P921main subjectgenome-wide association studyQ1098876
P304page(s)478-494
P577publication date2013-05-05
P1433published inGenetic EpidemiologyQ5532864
P1476titlePathway-based approaches for sequencing-based genome-wide association studies
P478volume37

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cites work (P2860)
Q36226770A Data Fusion Approach to Enhance Association Study in Epilepsy.
Q47159542A Review of Pathway-Based Analysis Tools That Visualize Genetic Variants
Q47878052Alzheimer disease: modeling an Aβ-centered biological network
Q36068307An Optimal Bahadur-Efficient Method in Detection of Sparse Signals with Applications to Pathway Analysis in Sequencing Association Studies
Q90444258Gene-level genome-wide association analysis of suicide attempt, a preliminary study in a psychiatric Mexican population
Q34429995Missing genetic risk in neural tube defects: can exome sequencing yield an insight?
Q39429370Pathway-based approach using hierarchical components of collapsed rare variants
Q38851955Post hoc Analysis for Detecting Individual Rare Variant Risk Associations Using Probit Regression Bayesian Variable Selection Methods in Case-Control Sequencing Studies
Q38293376Recent advances in systemic lupus erythematosus genetics in an Asian population
Q37222581Whole exome sequencing of extreme age-related macular degeneration phenotypes
Q40431321Whole-Exome Sequencing to Identify Novel Biological Pathways Associated With Infertility After Pelvic Inflammatory Disease
Q38955754gsSKAT: Rapid gene set analysis and multiple testing correction for rare-variant association studies using weighted linear kernels

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