Functional characterization of a full length pregnane X receptor, expression in vivo, and identification of PXR alleles, in zebrafish (Danio rerio)

scientific article published on 20 September 2013

Functional characterization of a full length pregnane X receptor, expression in vivo, and identification of PXR alleles, in zebrafish (Danio rerio) is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1016/J.AQUATOX.2013.09.014
P932PMC publication ID3873750
P698PubMed publication ID24121122
P5875ResearchGate publication ID257754137

P50authorAnders GoksøyrQ17064580
Roger Lille-LangøyQ59664522
Malin C CelanderQ64212382
John J. StegemanQ109774481
Jared V. GoldstoneQ37643741
Mark E. HahnQ37643930
P2093author name stringAkira Kubota
Sibel I Karchner
Afonso C D Bainy
P2860cites workSXR, a novel steroid and xenobiotic-sensing nuclear receptorQ22003995
The human orphan nuclear receptor PXR is activated by compounds that regulate CYP3A4 gene expression and cause drug interactionsQ24310512
Genenames.org: the HGNC resources in 2013Q24595108
Genetic predictors of interindividual variability in hepatic CYP3A4 expressionQ24631001
Evolutionary selection across the nuclear hormone receptor superfamily with a focus on the NR1I subfamily (vitamin D, pregnane X, and constitutive androstane receptors).Q24815571
Unexpected novel relational links uncovered by extensive developmental profiling of nuclear receptor expressionQ27314765
The human nuclear xenobiotic receptor PXR: structural determinants of directed promiscuityQ27632611
Construction and characterization of a fully active PXR/SRC-1 tethered protein with increased stabilityQ27650531
Clustal W and Clustal X version 2.0Q27860517
A general empirical model of protein evolution derived from multiple protein families using a maximum-likelihood approachQ27860716
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed modelsQ27860746
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony MethodsQ27860929
The human pregnane X receptor: genomic structure and identification and functional characterization of natural allelic variantsQ28201500
The nuclear pregnane X receptor: a key regulator of xenobiotic metabolismQ28206406
An orphan nuclear receptor activated by pregnanes defines a novel steroid signaling pathwayQ28263744
PXR (NR1I2): splice variants in human tissues, including brain, and identification of neurosteroids and nicotine as PXR activatorsQ28281902
Activation of mammalian retinoid X receptors by the insect growth regulator methopreneQ28367841
The pregnane X receptor: a promiscuous xenobiotic receptor that has diverged during evolutionQ28378587
Evolution of the pregnane x receptor: adaptation to cross-species differences in biliary bile saltsQ28755660
Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) dataQ29616220
Mutation nomenclature extensions and suggestions to describe complex mutations: a discussionQ29616531
Novel single nucleotide polymorphisms in the promoter and intron 1 of human pregnane X receptor/NR1I2 and their association with CYP3A4 expressionQ42519981
Regulation of zebrafish CYP3A65 transcription by AHR2.Q42711641
Activation of a tunicate (Ciona intestinalis) xenobiotic receptor orthologue by both natural toxins and synthetic toxicantsQ42722651
Pregnane X receptor (PXR), constitutive androstane receptor (CAR), and benzoate X receptor (BXR) define three pharmacologically distinct classes of nuclear receptorsQ43974257
Benzoate X receptors alpha and beta are pharmacologically distinct and do not function as xenobiotic receptorsQ44116143
Pregnane X receptor up-regulation of P-glycoprotein expression and transport function at the blood-brain barrierQ45025187
A structural basis for constitutive activity in the human CAR/RXRalpha heterodimerQ45195405
Update on allele nomenclature for human cytochromes P450 and the Human Cytochrome P450 Allele (CYP-allele) Nomenclature DatabaseQ45561380
Expression of PXR, CYP3A and MDR1 genes in liver of zebrafishQ46507872
Constitutive and xenobiotics-induced expression of a novel CYP3A gene from zebrafish larvaQ46515187
A comparison of hepatic P450 induction in rat and trout (Oncorhynchus mykiss): delineation of the site of resistance of fish to phenobarbital-type inducersQ46915377
The pregnane X receptor locus is associated with susceptibility to inflammatory bowel diseaseQ46939911
Evolutionary genomics of nuclear receptors: from twenty-five ancestral genes to derived endocrine systemsQ47259714
Proposal for an allele nomenclature system based on the evolutionary divergence of haplotypesQ48727753
Nomenclature for the description of human sequence variationsQ48738393
Recommendations for a nomenclature system for human gene mutations. Nomenclature Working GroupQ48771295
Expression and activity of p-glycoprotein elevated by dexamethasone in cultured retinal pigment epithelium involve glucocorticoid receptor and pregnane X receptor.Q54310936
Further consideration of phenobarbital effects on cytochrome P-450 activity in the killifish, Fundulus HeteroclitusQ59848683
Species characteristics of the hepatic xenobiotic and steroid biotransformation systems of two teleost fish, Atlantic cod (Gadus morhua) and rainbow trout (Salmo gairdneri)Q68823742
Absence of hepatic microsomal pentyl- or benzyl-resorufin O-dealkylase induction in rainbow trout (Salmo gairdneri) treated with phenobarbitoneQ68983125
Rat pregnane X receptor: molecular cloning, tissue distribution, and xenobiotic regulationQ78025580
CDD: conserved domains and protein three-dimensional structureQ30424248
Evolution of pharmacologic specificity in the pregnane X receptorQ33326759
Amplification efficiency: linking baseline and bias in the analysis of quantitative PCR dataQ33411668
Evolutionary history and functional characterization of the amphibian xenosensor CAR.Q33636734
P450 gene induction by structurally diverse xenochemicals: central role of nuclear receptors CAR, PXR, and PPAR.Q33720425
The evolution of farnesoid X, vitamin D, and pregnane X receptors: insights from the green-spotted pufferfish (Tetraodon nigriviridis) and other non-mammalian species.Q33811323
Two panels of steroid receptor luciferase reporter cell lines for compound profiling.Q33837335
Use of the nuclear receptor PXR to predict drug interactionsQ34088796
Population pharmacokinetic modeling of the association between 63396C->T pregnane X receptor polymorphism and unboosted atazanavir clearanceQ34309475
Identification of bile acid precursors as endogenous ligands for the nuclear xenobiotic pregnane X receptorQ34467451
Polymorphisms in NF-κB, PXR, LXR, PPARγ and risk of inflammatory bowel diseaseQ34487187
Evolution of promiscuous nuclear hormone receptors: LXR, FXR, VDR, PXR, and CARQ34550999
Functional and structural comparison of PXR and CAR.Q35062476
Dissection of organs from the adult zebrafishQ35130644
CAR and PXR: the xenobiotic-sensing receptorsQ35944704
Opposing regulation of cytochrome P450 expression by CAR and PXR in hypothyroid miceQ36103384
CAR and PXR: xenosensors of endocrine disrupters?Q36212927
A comprehensive in vitro and in silico analysis of antibiotics that activate pregnane X receptor and induce CYP3A4 in liver and intestineQ36331220
Pharmacogenomics of Cytochrome P450 3A4: Recent Progress Toward the "Missing Heritability" ProblemQ36634077
Role of CAR and PXR in xenobiotic sensing and metabolismQ36672089
Activation of steroid and xenobiotic receptor (SXR, NR1I2) and its orthologs in laboratory, toxicologic, and genome model speciesQ36755546
Identification of polymorphisms in the 3'-untranslated region of the human pregnane X receptor (PXR) gene associated with variability in cytochrome P450 3A (CYP3A) metabolismQ37207247
Molecular cloning, characterization, and evolutionary analysis of estrogen receptors from phylogenetically ancient fishQ37325292
The cytochrome P450 2AA gene cluster in zebrafish (Danio rerio): expression of CYP2AA1 and CYP2AA2 and response to phenobarbital-type inducersQ37355755
The steroid and xenobiotic receptor (SXR), beyond xenobiotic metabolismQ37400616
Interactions of pharmaceuticals and other xenobiotics on hepatic pregnane X receptor and cytochrome P450 3A signaling pathway in rainbow trout (Oncorhynchus mykiss).Q39666096
Regulation of CYP3A4 by pregnane X receptor: The role of nuclear receptors competing for response element bindingQ39737247
Compound profiling using a panel of steroid hormone receptor cell-based assaysQ39946315
The orphan human pregnane X receptor mediates the transcriptional activation of CYP3A4 by rifampicin through a distal enhancer moduleQ40916686
Metabolism of alkoxyphenoxazones by channel catfish liver microsomes: effects of phenobarbital, Aroclor 1254 and 3-methylcholanthreneQ41863802
Improved dual-luciferase reporter assays for nuclear receptorsQ42235596
Natural protein variants of pregnane X receptor with altered transactivation activity toward CYP3A4.Q42511482
The role of residues T248, Y249 and T422 in the function of human pregnane X receptorQ42512684
Role of AHR2 in the expression of novel cytochrome P450 1 family genes, cell cycle genes, and morphological defects in developing zebra fish exposed to 3,3',4,4',5-pentachlorobiphenyl or 2,3,7,8-tetrachlorodibenzo-p-dioxinQ42517288
P921main subjectDanio rerioQ169444
P304page(s)447-457
P577publication date2013-09-20
P1433published inAquatic ToxicologyQ4782796
P1476titleFunctional characterization of a full length pregnane X receptor, expression in vivo, and identification of PXR alleles, in zebrafish (Danio rerio)
P478volume142-143

Reverse relations

cites work (P2860)
Q98217010Assessing species-specific differences for nuclear receptor activation for environmental water extracts
Q38932500BFCOD activity in fish cell lines and zebrafish embryos and its modulation by chemical ligands of human aryl hydrocarbon and nuclear receptors.
Q33835410Development of a common carp (Cyprinus carpio) pregnane X receptor (cPXR) transactivation reporter assay and its activation by azole fungicides and pharmaceutical chemicals.
Q49572693Endocrine disruption and differential gene expression in sentinel fish on St. Lawrence Island, Alaska: Health implications for indigenous residents.
Q64958249Evolutionary Plasticity in Detoxification Gene Modules: The Preservation and Loss of the Pregnane X Receptor in Chondrichthyes Lineages.
Q44856350In response: conservation versus functional diversification of nuclear receptors: an academic perspective
Q27022545Marine invertebrate xenobiotic-activated nuclear receptors: their application as sensor elements in high-throughput bioassays for marine bioactive compounds
Q35086241Metformin exposure at environmentally relevant concentrations causes potential endocrine disruption in adult male fish
Q35029560Regulation of pregnane-X-receptor, CYP3A and P-glycoprotein genes in the PCB-resistant killifish (Fundulus heteroclitus) population from New Bedford Harbor
Q35014430Role of pregnane X receptor and aryl hydrocarbon receptor in transcriptional regulation of pxr, CYP2, and CYP3 genes in developing zebrafish
Q58107759Sequence variations in pxr (nr1i2) from zebrafish (Danio rerio) strains affect nuclear receptor function
Q38300335Zebrafish vitamin K epoxide reductases: expression in vivo, along extracellular matrix mineralization and under phylloquinone and warfarin in vitro exposure.

Search more.