| scholarly article | Q13442814 |
| P50 | author | Somsakul Pop Wongpalee | Q85999252 |
| Douglas L Black | Q86975303 | ||
| P2093 | author name string | James A Wohlschlegel | |
| Shalini Sharma | |||
| Ajay Vashisht | |||
| Darryl Chui | |||
| P2860 | cites work | An ATP-independent complex commits pre-mRNA to the mammalian spliceosome assembly pathway | Q44540184 |
| Trans splicing of mRNA precursors | Q44776579 | ||
| Exon definition complexes contain the tri-snRNP and can be directly converted into B-like precatalytic splicing complexes | Q46044906 | ||
| Identification of ubiquitination sites and determination of ubiquitin-chain architectures by mass spectrometry | Q46068489 | ||
| The generally expressed hnRNP F is involved in a neural-specific pre-mRNA splicing event | Q46698520 | ||
| Inhibition of msl-2 splicing by Sex-lethal reveals interaction between U2AF35 and the 3' splice site AG. | Q47072290 | ||
| Optimized fast and sensitive acquisition methods for shotgun proteomics on a quadrupole orbitrap mass spectrometer | Q47847633 | ||
| Novel modes of splicing repression by PTB. | Q48548603 | ||
| The protein Sex-lethal antagonizes the splicing factor U2AF to regulate alternative splicing of transformer pre-mRNA. | Q52538175 | ||
| The primer extension assay. | Q54452165 | ||
| The evolutionary landscape of alternative splicing in vertebrate species | Q56894874 | ||
| A two-step mechanism for 5' and 3' splice-site pairing | Q59095209 | ||
| U1 snRNP targets an essential splicing factor, U2AF65, to the 3' splice site by a network of interactions spanning the exon | Q67469400 | ||
| Activation of c-src neuron-specific splicing by an unusual RNA element in vivo and in vitro | Q68133924 | ||
| U2 as well as U1 small nuclear ribonucleoproteins are involved in premessenger RNA splicing | Q70104555 | ||
| A functional association between the 5' and 3' splice site is established in the earliest prespliceosome complex (E) in mammals | Q70744375 | ||
| Dynamic antagonism between ETR-3 and PTB regulates cell type-specific alternative splicing | Q77876084 | ||
| An exonic splicing silencer represses spliceosome assembly after ATP-dependent exon recognition | Q80336614 | ||
| Genome-wide association between branch point properties and alternative splicing | Q21092523 | ||
| Functional association of U2 snRNP with the ATP-independent spliceosomal complex E | Q22254390 | ||
| Multisite RNA binding and release of polypyrimidine tract binding protein during the regulation of c-src neural-specific splicing | Q22254669 | ||
| The CELF family of RNA binding proteins is implicated in cell-specific and developmentally regulated alternative splicing | Q24290741 | ||
| RNA helicase p68 (DDX5) regulates tau exon 10 splicing by modulating a stem-loop structure at the 5' splice site | Q24293776 | ||
| Purification and characterization of native spliceosomes suitable for three-dimensional structural analysis | Q24296676 | ||
| Muscleblind proteins regulate alternative splicing | Q24299521 | ||
| Dynamic protein-protein interaction wiring of the human spliceosome | Q24306136 | ||
| Evidence that sequence-independent binding of highly conserved U2 snRNP proteins upstream of the branch site is required for assembly of spliceosomal complex A | Q24317598 | ||
| A novel U2 and U11/U12 snRNP protein that associates with the pre-mRNA branch site. | Q24535663 | ||
| p68 RNA helicase is an essential human splicing factor that acts at the U1 snRNA-5' splice site duplex | Q24537595 | ||
| Cooperative assembly of an hnRNP complex induced by a tissue-specific homolog of polypyrimidine tract binding protein | Q24551190 | ||
| hnRNP H is a component of a splicing enhancer complex that activates a c-src alternative exon in neuronal cells | Q24554786 | ||
| Global regulation of alternative splicing during myogenic differentiation | Q24632881 | ||
| MicroRNAs regulate the expression of the alternative splicing factor nPTB during muscle development | Q24670766 | ||
| Roles of hnRNP A1, SR proteins, and p68 helicase in c-H-ras alternative splicing regulation | Q24684890 | ||
| Roles for SR proteins and hnRNP A1 in the regulation of c-src exon N1. | Q39732398 | ||
| Polypyrimidine tract binding protein controls the transition from exon definition to an intron defined spliceosome | Q40025470 | ||
| U1 snRNP-ASF/SF2 interaction and 5' splice site recognition: characterization of required elements. | Q40395456 | ||
| Does steric interference between splice sites block the splicing of a short c-src neuron-specific exon in non-neuronal cells? | Q41179531 | ||
| Preparation of extracts from higher eukaryotes | Q41981177 | ||
| Quaking and PTB control overlapping splicing regulatory networks during muscle cell differentiation | Q42146748 | ||
| Antagonistic regulation of alpha-actinin alternative splicing by CELF proteins and polypyrimidine tract binding protein | Q43207063 | ||
| HnRNP L-mediated regulation of mammalian alternative splicing by interference with splice site recognition | Q43234028 | ||
| Early organization of pre-mRNA during spliceosome assembly. | Q44046358 | ||
| Census for proteome quantification | Q44460165 | ||
| RNA helicase proteins as chaperones and remodelers | Q27025517 | ||
| The Clothes Make the mRNA: Past and Present Trends in mRNP Fashion | Q27027206 | ||
| Crystallographic Analysis of Polypyrimidine Tract-Binding Protein-Raver1 Interactions Involved in Regulation of Alternative Splicing | Q27676040 | ||
| L30 binds the nascent RPL30 transcript to repress U2 snRNP recruitment | Q27933044 | ||
| Analyzing chromatin remodeling complexes using shotgun proteomics and normalized spectral abundance factors | Q27935763 | ||
| The spliceosome: design principles of a dynamic RNP machine | Q28131809 | ||
| Context-dependent control of alternative splicing by RNA-binding proteins | Q28245737 | ||
| Protein-protein interactions and 5'-splice-site recognition in mammalian mRNA precursors | Q28251112 | ||
| Specific interactions between proteins implicated in splice site selection and regulated alternative splicing | Q28257351 | ||
| Regulation of Fas alternative splicing by antagonistic effects of TIA-1 and PTB on exon definition | Q28267920 | ||
| Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping | Q28269954 | ||
| The CUGBP2 splicing factor regulates an ensemble of branchpoints from perimeter binding sites with implications for autoregulation | Q28475882 | ||
| A neuron-specific splicing switch mediated by an array of pre-mRNA repressor sites: evidence of a regulatory role for the polypyrimidine tract binding protein and a brain-specific PTB counterpart | Q28581499 | ||
| MBNL1 and PTB cooperate to repress splicing of Tpm1 exon 3 | Q28584159 | ||
| Splicing switch of an epigenetic regulator by RNA helicases promotes tumor-cell invasiveness | Q28593622 | ||
| RNA helicases DDX5 and DDX17 dynamically orchestrate transcription, miRNA, and splicing programs in cell differentiation | Q28910223 | ||
| Spliceosome Structure and Function | Q29392298 | ||
| Pre-mRNA splicing: awash in a sea of proteins | Q29547272 | ||
| Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing | Q29547470 | ||
| hnRNP proteins and the biogenesis of mRNA | Q29547911 | ||
| Understanding alternative splicing: towards a cellular code | Q29615085 | ||
| Exon recognition in vertebrate splicing | Q29615088 | ||
| DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics | Q29615322 | ||
| Messenger-RNA-binding proteins and the messages they carry | Q29616012 | ||
| Interactions between small nuclear ribonucleoprotein particles in formation of spliceosomes | Q29618293 | ||
| Distinct binding specificities and functions of higher eukaryotic polypyrimidine tract-binding proteins | Q29618943 | ||
| The SR protein family of splicing factors: master regulators of gene expression | Q29619935 | ||
| De novo prediction of PTBP1 binding and splicing targets reveals unexpected features of its RNA recognition and function | Q31151038 | ||
| P68 RNA helicase (DDX5) alters activity of cis- and trans-acting factors of the alternative splicing of H-Ras | Q33359543 | ||
| Polypyrimidine tract binding protein antagonizes exon definition | Q33558440 | ||
| Protein composition of mammalian spliceosomes assembled in vitro | Q33847099 | ||
| ATPase/helicase activities of p68 RNA helicase are required for pre-mRNA splicing but not for assembly of the spliceosome | Q33925070 | ||
| Target-decoy search strategy for mass spectrometry-based proteomics | Q34070061 | ||
| The essential pre-mRNA splicing factor SF2 influences 5' splice site selection by activating proximal sites. | Q34342937 | ||
| Resolution of the mammalian E complex and the ATP-dependent spliceosomal complexes on native agarose mini-gels | Q34362249 | ||
| Exon repression by polypyrimidine tract binding protein | Q34366378 | ||
| Protein composition of human prespliceosomes isolated by a tobramycin affinity-selection method | Q34429680 | ||
| Mechanisms and Regulation of Alternative Pre-mRNA Splicing | Q34467642 | ||
| Systematic discovery of Xist RNA binding proteins | Q34470333 | ||
| Stem-loop 4 of U1 snRNA is essential for splicing and interacts with the U2 snRNP-specific SF3A1 protein during spliceosome assembly. | Q34518971 | ||
| A conserved family of nuclear phosphoproteins localized to sites of polymerase II transcription | Q34573390 | ||
| Evidence for a linear search in bimolecular 3' splice site AG selection | Q34967051 | ||
| The polypyrimidine tract binding protein (PTB) represses splicing of exon 6B from the beta-tropomyosin pre-mRNA by directly interfering with the binding of the U2AF65 subunit | Q35131606 | ||
| Evolution of SR protein and hnRNP splicing regulatory factors | Q35605779 | ||
| ProLuCID: An improved SEQUEST-like algorithm with enhanced sensitivity and specificity | Q35690439 | ||
| Global Promotion of Alternative Internal Exon Usage by mRNA 3' End Formation Factors | Q35690588 | ||
| PSD-95 is post-transcriptionally repressed during early neural development by PTBP1 and PTBP2. | Q35783819 | ||
| Regulation of alternative splicing by PTB and associated factors. | Q36139329 | ||
| Neuronal regulation of pre-mRNA splicing by polypyrimidine tract binding proteins, PTBP1 and PTBP2. | Q36174640 | ||
| RNA Binding Protein Ptbp2 Is Essential for Male Germ Cell Development | Q36234263 | ||
| A quantitative analysis software tool for mass spectrometry-based proteomics | Q36431175 | ||
| Conserved intron elements repress splicing of a neuron-specific c-src exon in vitro | Q36555950 | ||
| The polypyrimidine tract binding protein binds upstream of neural cell-specific c-src exon N1 to repress the splicing of the intron downstream | Q36570481 | ||
| The splicing regulator PTBP1 controls the activity of the transcription factor Pbx1 during neuronal differentiation. | Q36585875 | ||
| Evolutionary dynamics of gene and isoform regulation in Mammalian tissues. | Q36598797 | ||
| SR proteins promote the first specific recognition of Pre-mRNA and are present together with the U1 small nuclear ribonucleoprotein particle in a general splicing enhancer complex | Q36670430 | ||
| Exon definition may facilitate splice site selection in RNAs with multiple exons | Q36713104 | ||
| Direct competition between hnRNP C and U2AF65 protects the transcriptome from the exonization of Alu elements | Q36775793 | ||
| Structure-function relationships of the polypyrimidine tract binding protein | Q36988167 | ||
| The splicing regulator PTBP2 controls a program of embryonic splicing required for neuronal maturation | Q37494929 | ||
| U1 snRNA directly interacts with polypyrimidine tract-binding protein during splicing repression | Q37597322 | ||
| From unwinding to clamping - the DEAD box RNA helicase family | Q37903659 | ||
| Structure, function and regulation of spliceosomal RNA helicases | Q37998686 | ||
| Exon and intron definition in pre-mRNA splicing | Q38050345 | ||
| Nuclear matrix protein Matrin3 regulates alternative splicing and forms overlapping regulatory networks with PTB. | Q38301627 | ||
| Structure of PTB bound to RNA: specific binding and implications for splicing regulation | Q38320705 | ||
| Position-dependent alternative splicing activity revealed by global profiling of alternative splicing events regulated by PTB. | Q38341668 | ||
| The PTB interacting protein raver1 regulates alpha-tropomyosin alternative splicing | Q38347681 | ||
| Knocking down the expression of TRA2β inhibits the proliferation and migration of human glioma cells | Q38841643 | ||
| Polypyrimidine tract binding protein blocks the 5' splice site-dependent assembly of U2AF and the prespliceosomal E complex | Q39101565 | ||
| RAVER1 is a coactivator of MDA5-mediated cellular antiviral response. | Q39198184 | ||
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | ribonucleoprotein complex | Q417662 |
| P577 | publication date | 2016-11-24 | |
| P1433 | published in | eLife | Q2000008 |
| P1476 | title | Large-scale remodeling of a repressed exon ribonucleoprotein to an exon definition complex active for splicing | |
| P478 | volume | 5 |
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| Q52593252 | In vitro iCLIP-based modeling uncovers how the splicing factor U2AF2 relies on regulation by cofactors. |
| Q64946284 | Structural-functional interactions of NS1-BP protein with the splicing and mRNA export machineries for viral and host gene expression. |
| Q50211474 | The mechanisms of a mammalian splicing enhancer. |
| Q50066011 | Transcriptional regulation of macrophage cholesterol efflux and atherogenesis by a long noncoding RNA. |
| Q91771235 | View from an mRNP: The Roles of SR Proteins in Assembly, Maturation and Turnover |
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