| scholarly article | Q13442814 |
| P819 | ADS bibcode | 2004PNAS..10112497F |
| P356 | DOI | 10.1073/PNAS.0404236101 |
| P932 | PMC publication ID | 514656 |
| P698 | PubMed publication ID | 15314216 |
| P5875 | ResearchGate publication ID | 8397655 |
| P50 | author | Nicholas C Fitzkee | Q88763902 |
| George D. Rose | Q90696599 | ||
| P2860 | cites work | Equation of State Calculations by Fast Computing Machines | Q5384234 |
| The Protein Data Bank | Q24515306 | ||
| Levinthal's paradox | Q24563507 | ||
| Polymer principles and protein folding | Q24672635 | ||
| MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures | Q26778412 | ||
| Raster3D: photorealistic molecular graphics | Q27860557 | ||
| Stereochemistry of polypeptide chain configurations | Q28190300 | ||
| Intrinsically disordered protein | Q28191444 | ||
| CRYSOL– a Program to Evaluate X-ray Solution Scattering of Biological Macromolecules from Atomic Coordinates | Q29642130 | ||
| The effect of the polyproline II (PPII) conformation on the denatured state entropy. | Q30164889 | ||
| Ab initio prediction of protein structure using LINUS. | Q30330293 | ||
| Unfolded state of polyalanine is a segmented polyproline II helix. | Q30341342 | ||
| Polymer principles in protein structure and stability. | Q30371172 | ||
| Helix signals in proteins | Q30400745 | ||
| Origin of the neighboring residue effect on peptide backbone conformation | Q31094215 | ||
| Exploring Flory's isolated-pair hypothesis: statistical mechanics of helix-coil transitions in polyalanine and the C-peptide from RNase A. | Q33713782 | ||
| Polyproline II structure in a sequence of seven alanine residues. | Q34034318 | ||
| Polyproline II helix conformation in a proline-rich environment: a theoretical study | Q34184748 | ||
| Protein Denaturation | Q34221155 | ||
| Changes in biomolecular conformation seen by small angle X-ray scattering | Q34440498 | ||
| Toward a taxonomy of the denatured state: small angle scattering studies of unfolded proteins | Q34989905 | ||
| The Flory isolated-pair hypothesis is not valid for polypeptide chains: implications for protein folding | Q35817954 | ||
| Polyproline II helical structure in protein unfolded states: lysine peptides revisited | Q36639178 | ||
| A physical basis for protein secondary structure | Q36741734 | ||
| Random-coil behavior and the dimensions of chemically unfolded proteins | Q37493905 | ||
| A simple model for polyproline II structure in unfolded states of alanine-based peptides | Q38270402 | ||
| Steric restrictions in protein folding: an alpha-helix cannot be followed by a contiguous beta-strand | Q42012287 | ||
| Persistence of native-like topology in a denatured protein in 8 M urea | Q43682045 | ||
| The number of turns in globular proteins | Q44661461 | ||
| Role of solvent in determining conformational preferences of alanine dipeptide in water. | Q44775722 | ||
| On the origin of residual dipolar couplings from denatured proteins | Q47331925 | ||
| Polyproline II helix is the preferred conformation for unfolded polyalanine in water | Q47715263 | ||
| 11 Small-angle x-ray scattering | Q52779661 | ||
| Methinks it is like a folding curve. | Q52946664 | ||
| NMR characterization of residual structure in the denatured state of protein L | Q56999432 | ||
| Stabilization of the ribonuclease S-peptide alpha-helix by trifluoroethanol | Q57139038 | ||
| Protein globularization during folding. A study by synchrotron small-angle X-ray scattering | Q71730350 | ||
| Circular dichroism of poly-L-proline in an unordered conformation | Q72172886 | ||
| Evidence for residual structure in acid- and heat-denatured proteins | Q72327520 | ||
| Proteins in 6-M guanidine hydrochloride. Demonstration of random coil behavior | Q72874706 | ||
| Computational simulation of the statistical properties of unfolded proteins | Q73023070 | ||
| Trifluoroethanol-induced conformational transition of hen egg-white lysozyme studied by small-angle X-ray scattering | Q73879397 | ||
| P433 | issue | 34 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | statistics | Q12483 |
| P304 | page(s) | 12497-12502 | |
| P577 | publication date | 2004-08-16 | |
| P1433 | published in | Proceedings of the National Academy of Sciences of the United States of America | Q1146531 |
| P1476 | title | Reassessing random-coil statistics in unfolded proteins | |
| P478 | volume | 101 |
| Q24672727 | A backbone-based theory of protein folding |
| Q43509422 | A natural missing link between activated and downhill protein folding scenarios |
| Q26796304 | A practical guide to small angle X-ray scattering (SAXS) of flexible and intrinsically disordered proteins |
| Q37418779 | A self-consistent description of the conformational behavior of chemically denatured proteins from NMR and small angle scattering. |
| Q34144652 | A structural model for unfolded proteins from residual dipolar couplings and small-angle x-ray scattering. |
| Q39481387 | Advanced ensemble modelling of flexible macromolecules using X-ray solution scattering |
| Q34543978 | Alanine and proline content modulate global sensitivity to discrete perturbations in disordered proteins |
| Q24653927 | Amyloid beta-protein monomer folding: free-energy surfaces reveal alloform-specific differences |
| Q47972812 | An Efficient Method for Estimating the Hydrodynamic Radius of Disordered Protein Conformations |
| Q42066088 | Arc-repressor dimerization on DNA: folding rate enhancement by colocalization |
| Q34266040 | Are long-range structural correlations behind the aggregration phenomena of polyglutamine diseases? |
| Q36491358 | Assessing the solvent-dependent surface area of unfolded proteins using an ensemble model |
| Q36420317 | BPPred: a Web-based computational tool for predicting biophysical parameters of proteins |
| Q42092748 | Binding of the CYK-4 subunit of the centralspindlin complex induces a large scale conformational change in the kinesin subunit. |
| Q33226011 | Building native protein conformation from highly approximate backbone torsion angles |
| Q41954049 | Calmodulin, conformational states, and calcium signaling. A single-molecule perspective |
| Q41611863 | Calmodulin-induced structural changes in endothelial nitric oxide synthase |
| Q41829482 | Characterization of the unfolded state of repeat proteins |
| Q35616340 | Characterizing the unfolded states of proteins using single-molecule FRET spectroscopy and molecular simulations |
| Q34251772 | Chloroplastic Hsp100 chaperones ClpC2 and ClpD interact in vitro with a transit peptide only when it is located at the N-terminus of a protein. |
| Q37264142 | Comprehensive structural and dynamical view of an unfolded protein from the combination of single-molecule FRET, NMR, and SAXS. |
| Q30008778 | Confinement and Stabilization of Fyn SH3 Folding Intermediate Mimetics within the Cavity of the Chaperonin GroEL Demonstrated by Relaxation-Based NMR. |
| Q42562456 | Conformational Entropy of an Ideal Cross-Linking Polymer Chain |
| Q47698068 | Conformational Heterogeneity and FRET Data Interpretation for Dimensions of Unfolded Proteins |
| Q57080193 | Conformational distributions of unfolded polypeptides from novel NMR techniques |
| Q31122664 | Construction and comparison of the statistical coil states of unfolded and intrinsically disordered proteins from nearest-neighbor corrected conformational propensities of short peptides |
| Q37256844 | Continuous dissolution of structure during the unfolding of a small protein |
| Q34099125 | Contribution of long-range interactions to the secondary structure of an unfolded globin |
| Q34067901 | Cooperative formation of native-like tertiary contacts in the ensemble of unfolded states of a four-helix protein |
| Q41948565 | Counting peptide-water hydrogen bonds in unfolded proteins. |
| Q30410150 | Creating novel protein scripts beyond natural alphabets |
| Q37040767 | Denaturant-induced expansion and compaction of a multi-domain protein: IgG. |
| Q33818465 | Describing sequence-ensemble relationships for intrinsically disordered proteins |
| Q33287397 | Development of a technique for the investigation of folding dynamics of single proteins for extended time periods |
| Q39578401 | Dimension conversion and scaling of disordered protein chains |
| Q64063280 | Direct Binding of the Flexible C-Terminal Segment of Periaxin to β4 Integrin Suggests a Molecular Basis for CMT4F |
| Q30010233 | Domain cooperativity in multidomain proteins: what can we learn from molecular alignment in anisotropic media? |
| Q41829385 | Dynamics of SARS-coronavirus HR2 domain in the prefusion and transition states |
| Q57192086 | Effects of Doxorubicin on the Liquid-Liquid Phase Change Properties of Elastin-Like Polypeptides |
| Q41909881 | Electrostatic effects in unfolded staphylococcal nuclease |
| Q35033709 | End-to-end distance distributions and intrachain diffusion constants in unfolded polypeptide chains indicate intramolecular hydrogen bond formation |
| Q81376037 | Energetics and dynamics of SNAREpin folding across lipid bilayers |
| Q101574283 | Ensemble description of the intrinsically disordered N-terminal domain of the Nipah virus P/V protein from combined NMR and SAXS |
| Q37067633 | Fluorescence characterization of denatured proteins |
| Q35670426 | Force field-dependent solution properties of glycine oligomers |
| Q46606788 | Formation of a molten globule like state in bovine serum albumin at alkaline pH. |
| Q35827190 | Fractal dimension of an intrinsically disordered protein: small-angle X-ray scattering and computational study of the bacteriophage λ N protein |
| Q87689741 | Helical Propensity Affects the Conformational Properties of the Denatured State of Cytochrome c' |
| Q41973636 | Helix versus coil polypeptide macromers: gel networks with decoupled stiffness and permeability |
| Q33973960 | Homogeneous and heterogeneous tertiary structure ensembles of amyloid-β peptides. |
| Q37628029 | How force unfolding differs from chemical denaturation. |
| Q41403314 | Human adenosine A2A receptor binds calmodulin with high affinity in a calcium-dependent manner. |
| Q35884133 | Hydrodynamic Radii of Intrinsically Disordered Proteins Determined from Experimental Polyproline II Propensities |
| Q42921421 | Hydrogen bonding progressively strengthens upon transfer of the protein urea-denatured state to water and protecting osmolytes. |
| Q33526239 | Hydrogen-bond driven loop-closure kinetics in unfolded polypeptide chains |
| Q49990719 | Hypothesis: structural heterogeneity of the unfolded proteins originating from the coupling of the local clusters and the long-range distance distribution. |
| Q51748563 | Identification of the folding inhibitors of hen-egg lysozyme: gathering the right tools. |
| Q33385232 | Importance of backbone and solvent properties for conformational dynamics in polypeptides |
| Q35899015 | Insights into Unfolded Proteins from the Intrinsic ϕ/ψ Propensities of the AAXAA Host-Guest Series |
| Q39114601 | Intrinsic α helix propensities compact hydrodynamic radii in intrinsically disordered proteins |
| Q36508892 | Intrinsically disordered proteins in the neurodegenerative processes: formation of tau protein paired helical filaments and their analysis |
| Q41206175 | Investigation of the Polymeric Properties of α-Synuclein and Comparison with NMR Experiments: A Replica Exchange Molecular Dynamics Study |
| Q36242580 | Is there or isn't there? The case for (and against) residual structure in chemically denatured proteins |
| Q36431740 | Juxtanodin is an intrinsically disordered F-actin-binding protein |
| Q37173101 | Kinetic barriers and the role of topology in protein and RNA folding |
| Q26851842 | Local order in the unfolded state: conformational biases and nearest neighbor interactions |
| Q35629113 | Loop formation in unfolded polypeptide chains on the picoseconds to microseconds time scale |
| Q35896358 | Manifestations of native topology in the denatured state ensemble of Rhodopseudomonas palustris cytochrome c'. |
| Q30478703 | Mapping protein collapse with single-molecule fluorescence and kinetic synchrotron radiation circular dichroism spectroscopy |
| Q34189003 | Measuring unfolding of proteins in the presence of denaturant using fluorescence correlation spectroscopy |
| Q94503755 | Mechanical Unfolding of Single Polyubiquitin Molecules Reveals Evidence of Dynamic Disorder |
| Q41941949 | Methionine oxidation of monomeric lambda repressor: the denatured state ensemble under nondenaturing conditions |
| Q35753025 | Minireview: structural insights into early folding events using continuous-flow time-resolved small-angle X-ray scattering |
| Q34561643 | Modeling loop entropy |
| Q52593918 | Modeling the Early Stages of Phase Separation in Disordered Elastin-like Proteins. |
| Q33800083 | Modulating native-like residual structure in the fully denatured state of photoactive yellow protein affects its refolding |
| Q89612913 | Molecular Cloning of an Amino Acid Permease Gene and Structural Characterization of the Protein in Common Bean (Phaseolus vulgaris L.). |
| Q37642482 | Molecular determinant of the effects of hydrostatic pressure on protein folding stability |
| Q51958292 | Multiple time scale dynamics of distance fluctuations in a semiflexible polymer: a one-dimensional generalized Langevin equation treatment. |
| Q43043710 | Native state energetics of the Src SH2 domain: evidence for a partially structured state in the denatured ensemble |
| Q42254511 | Non-random-coil behavior as a consequence of extensive PPII structure in the denatured state. |
| Q42212718 | Nonadditivity in the alpha-helix to coil transition |
| Q31129225 | On the importance of polar interactions for complexes containing intrinsically disordered proteins |
| Q28081207 | Order and disorder in intermediate filament proteins |
| Q41870328 | Order within disorder: aggrecan chondroitin sulphate-attachment region provides new structural insights into protein sequences classified as disordered |
| Q36497759 | Phosphorylation Increases Persistence Length and End-to-End Distance of a Segment of Tau Protein |
| Q51522059 | Phosphorylation alters backbone conformational preferences of serine and threonine peptides. |
| Q43100835 | Polyglutamine disruption of the huntingtin exon 1 N terminus triggers a complex aggregation mechanism |
| Q33285129 | Polymer properties of polythymine as revealed by translational diffusion |
| Q36342960 | Polymer scaling laws of unfolded and intrinsically disordered proteins quantified with single-molecule spectroscopy |
| Q34478711 | Polyproline II conformation is one of many local conformational states and is not an overall conformation of unfolded peptides and proteins. |
| Q34212739 | Polyproline II propensities from GGXGG peptides reveal an anticorrelation with beta-sheet scales |
| Q34407525 | Predicting most probable conformations of a given peptide sequence in the random coil state. |
| Q47835787 | Prediction of nearest neighbor effects on backbone torsion angles and NMR scalar coupling constants in disordered proteins. |
| Q79787842 | Probabilistic approach to determining unbiased random-coil carbon-13 chemical shift values from the protein chemical shift database |
| Q33227189 | Probing structural heterogeneities and fluctuations of nucleic acids and denatured proteins |
| Q46412461 | Proline-directed pseudo-phosphorylation at AT8 and PHF1 epitopes induces a compaction of the paperclip folding of Tau and generates a pathological (MC-1) conformation |
| Q24671711 | Protein folding: then and now |
| Q51969598 | Proteins and polymers. |
| Q58450671 | Quantitative measurements of protein-surface interaction thermodynamics |
| Q37493905 | Random-coil behavior and the dimensions of chemically unfolded proteins |
| Q36509387 | Reducing the dimensionality of the protein-folding search problem |
| Q37827111 | Role of solvation effects in protein denaturation: from thermodynamics to single molecules and back |
| Q36374431 | SS-map: Visualizing cooperative secondary structure elements in protein ensembles |
| Q43043739 | Secondary structure determines protein topology |
| Q35606668 | Sequence-specific solvent accessibilities of protein residues in unfolded protein ensembles. |
| Q34098641 | Single-molecule Forster resonance energy transfer study of protein dynamics under denaturing conditions |
| Q36180888 | Single-molecule fluorescence spectroscopy of protein folding. |
| Q50577647 | Slow Interconversion in a Heterogeneous Unfolded-State Ensemble of Outer-Membrane Phospholipase A. |
| Q28727357 | Slow unfolded-state structuring in Acyl-CoA binding protein folding revealed by simulation and experiment |
| Q37118723 | Small-angle X-ray scattering of reduced ribonuclease A: effects of solution conditions and comparisons with a computational model of unfolded proteins |
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| Q47361674 | Statistical description of the denatured structure of a single protein, staphylococcal nuclease, by FRET analysis. |
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| Q37938727 | Structural analysis of intrinsically disordered proteins by small-angle X-ray scattering |
| Q34978135 | Structural formation of huntingtin exon 1 aggregates probed by small-angle neutron scattering. |
| Q30369034 | Structures, basins, and energies: a deconstruction of the Protein Coil Library. |
| Q53113316 | Temperature and urea have opposing impacts on polyproline II conformational bias. |
| Q36045078 | The Complex Energy Landscape of the Protein IscU |
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| Q40973048 | The N-terminal cytoplasmic domain of neuregulin 1 type III is intrinsically disordered. |
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| Q39499121 | The fast and the slow: folding and trapping of λ6-85. |
| Q64996433 | The internal rotational barriers about NCα and CαC backbone bonds of polypeptides. |
| Q33850735 | The kinetics of conformational fluctuations in an unfolded protein measured by fluorescence methods |
| Q34107467 | The lipid-binding domain of wild type and mutant alpha-synuclein: compactness and interconversion between the broken and extended helix forms |
| Q43066044 | The low-pH unfolded state of the C-terminal domain of the ribosomal protein L9 contains significant secondary structure in the absence of denaturant but is no more compact than the low-pH urea unfolded state |
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| Q43121446 | The structure of dopamine induced alpha-synuclein oligomers. |
| Q42557995 | The unfolded state of the C-terminal domain of the ribosomal protein L9 contains both native and non-native structure |
| Q41558051 | Thermal expansivities of peptides, polypeptides and proteins as measured by pressure perturbation calorimetry |
| Q42060922 | Thermodynamics of loop formation in the denatured state of rhodopseudomonas palustris cytochrome c': scaling exponents and the reconciliation problem |
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