Transcriptional regulation of nonfermentable carbon utilization in budding yeast

scientific article published on 18 July 2009

Transcriptional regulation of nonfermentable carbon utilization in budding yeast is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P356DOI10.1111/J.1567-1364.2009.00555.X
P8608Fatcat IDrelease_py66vbooffhqvc2oqxr6m4wh64
P932PMC publication ID5003605
P698PubMed publication ID19686338
P5875ResearchGate publication ID26747447

P2093author name stringBernard Turcotte
François Robert
Nitnipa Soontorngun
Xiao Bei Liang
P2860cites workThe SNF1 kinase complex from Saccharomyces cerevisiae phosphorylates the transcriptional repressor protein Mig1p in vitro at four sites within or near regulatory domain 1Q77993773
The yeast zinc finger regulators Pdr1p and Pdr3p control pleiotropic drug resistance (PDR) as homo- and heterodimers in vivoQ78577668
A family of proteins containing a conserved domain that mediates interaction with the yeast SNF1 protein kinase complexQ24568190
Crystal structure of a PPR1-DNA complex: DNA recognition by proteins containing a Zn2Cys6 binuclear clusterQ27730753
Exploring the metabolic and genetic control of gene expression on a genomic scaleQ27860705
A comprehensive two-hybrid analysis to explore the yeast protein interactomeQ27861093
The yeast GID complex, a novel ubiquitin ligase (E3) involved in the regulation of carbohydrate metabolismQ27930750
Dual influence of the yeast Cat1p (Snf1p) protein kinase on carbon source-dependent transcriptional activation of gluconeogenic genes by the regulatory gene CAT8.Q27930961
New regulators of drug sensitivity in the family of yeast zinc cluster proteinsQ27931059
Oxidative stress-activated zinc cluster protein Stb5 has dual activator/repressor functions required for pentose phosphate pathway regulation and NADPH productionQ27931228
Regulation of gluconeogenesis in Saccharomyces cerevisiae is mediated by activator and repressor functions of Rds2.Q27931614
Isolation of the DLD gene of Saccharomyces cerevisiae encoding the mitochondrial enzyme D-lactate ferricytochrome c oxidoreductase.Q27932076
The Saccharomyces cerevisiae ADR1 gene is a positive regulator of transcription of genes encoding peroxisomal proteinsQ27932467
Role of Tos3, a Snf1 protein kinase kinase, during growth of Saccharomyces cerevisiae on nonfermentable carbon sourcesQ27932652
Pip2p: a transcriptional regulator of peroxisome proliferation in the yeast Saccharomyces cerevisiae.Q27932690
Catabolite degradation of fructose-1,6-bisphosphatase in the yeast Saccharomyces cerevisiae: a genome-wide screen identifies eight novel GID genes and indicates the existence of two degradation pathwaysQ27933074
Structure, expression and regulation of a nuclear gene encoding a mitochondrial protein: the yeast L(+)-lactate cytochrome c oxidoreductase (cytochrome b2)Q27933413
Glucose derepression of gluconeogenic enzymes in Saccharomyces cerevisiae correlates with phosphorylation of the gene activator Cat8pQ27933533
The biochemistry of peroxisomal beta-oxidation in the yeast Saccharomyces cerevisiaeQ27933605
The transcriptional activator Cat8p provides a major contribution to the reprogramming of carbon metabolism during the diauxic shift in Saccharomyces cerevisiaeQ27933847
Degradation of the gluconeogenic enzymes fructose-1,6-bisphosphatase and malate dehydrogenase is mediated by distinct proteolytic pathways and signaling eventsQ27933891
A heterodimer of the Zn2Cys6 transcription factors Pip2p and Oaf1p controls induction of genes encoding peroxisomal proteins in Saccharomyces cerevisiaeQ27934013
The lactate-proton symport of Saccharomyces cerevisiae is encoded by JEN1.Q27934290
Deregulation of gluconeogenic structural genes by variants of the transcriptional activator Cat8p of the yeast Saccharomyces cerevisiaeQ27934785
Pak1 protein kinase regulates activation and nuclear localization of Snf1-Gal83 protein kinaseQ27934911
Transcriptional activators Cat8 and Sip4 discriminate between sequence variants of the carbon source-responsive promoter element in the yeast Saccharomyces cerevisiaeQ27937036
Sip4, a Snf1 kinase-dependent transcriptional activator, binds to the carbon source-responsive element of gluconeogenic genesQ27937051
CAT8, a new zinc cluster-encoding gene necessary for derepression of gluconeogenic enzymes in the yeast Saccharomyces cerevisiaeQ27937168
Identification and characterization of HAP4: a third component of the CCAAT-bound HAP2/HAP3 heteromerQ27937184
The glycerol kinase (GUT1) gene of Saccharomyces cerevisiae: cloning and characterizationQ27937278
Expression of GUT1, which encodes glycerol kinase in Saccharomyces cerevisiae, is controlled by the positive regulators Adr1p, Ino2p and Ino4p and the negative regulator Opi1p in a carbon source-dependent fashion.Q27937342
Yeast SNF1 protein kinase interacts with SIP4, a C6 zinc cluster transcriptional activator: a new role for SNF1 in the glucose responseQ27937359
Contribution of Cat8 and Sip4 to the transcriptional activation of yeast gluconeogenic genes by carbon source-responsive elementsQ27937561
A poised initiation complex is activated by SNF1.Q27937977
Transcriptional responses to fatty acid are coordinated by combinatorial controlQ27939026
Activation of yeast Snf1 and mammalian AMP-activated protein kinase by upstream kinasesQ27939305
Snf1 protein kinase regulates Adr1 binding to chromatin but not transcription activationQ27939538
A member of the sugar transporter family, Stl1p is the glycerol/H+ symporter in Saccharomyces cerevisiaeQ27940125
Mediator subunit Gal11p/MED15 is required for fatty acid-dependent gene activation by yeast transcription factor Oaf1pQ28302854
Osmotic stress signaling and osmoadaptation in yeastsQ29617597
Systematic screen for human disease genes in yeastQ29617873
The AMP-activated/SNF1 protein kinase subfamily: metabolic sensors of the eukaryotic cell?Q29618125
Yeast carbon catabolite repressionQ29622932
Regulatory interactions between the Reg1-Glc7 protein phosphatase and the Snf1 protein kinaseQ30453592
Combined global localization analysis and transcriptome data identify genes that are directly coregulated by Adr1 and Cat8.Q30983980
Elm1p is one of three upstream kinases for the Saccharomyces cerevisiae SNF1 complexQ31152974
Promoter binding by the Adr1 transcriptional activator may be regulated by phosphorylation in the DNA-binding regionQ33369423
Glucose repression in yeastQ33632468
Phenotypic analysis of genes encoding yeast zinc cluster proteinsQ33931859
DNA recognition by GAL4: structure of a protein-DNA complex.Q34372191
Fungi and animals may share a common ancestor to nuclear receptorsQ34598552
Yeast Gal4: a transcriptional paradigm revisitedQ34683120
Isolation of mutations in the catalytic domain of the snf1 kinase that render its activity independent of the snf4 subunitQ34993926
Snf1 protein kinase: a key player in the response to cellular stress in yeastQ35053019
Transcriptional control of nonfermentative metabolism in the yeast Saccharomyces cerevisiaeQ35114839
A history of research on yeasts 9: regulation of sugar metabolismQ36245585
Yeast acyl-CoA synthetases at the crossroads of fatty acid metabolism and regulationQ36517725
Artificial recruitment of mediator by the DNA-binding domain of Adr1 overcomes glucose repression of ADH2 expressionQ36540288
The biochemistry of oleate induction: transcriptional upregulation and peroxisome proliferationQ36583927
A fungal family of transcriptional regulators: the zinc cluster proteinsQ36588772
Identification of potential target genes for Adr1p through characterization of essential nucleotides in UAS1.Q36654549
Yeast as a model system to study glucose-mediated signalling and responseQ36664091
The S. Cerevisiae HAP complex, a key regulator of mitochondrial function, coordinates nuclear and mitochondrial gene expressionQ36748575
Control of maltase synthesis in yeastQ36896670
SNF1/AMPK pathways in yeastQ36992466
How Saccharomyces responds to nutrientsQ37096066
Protein acetylation microarray reveals that NuA4 controls key metabolic target regulating gluconeogenesisQ37227239
Transport of carboxylic acids in yeastsQ37256924
Zinc fingers, zinc clusters, and zinc twists in DNA-binding protein domainsQ37391202
Alanine scanning site-directed mutagenesis of the zinc fingers of transcription factor ADR1: residues that contact DNA and that transactivateQ37608140
Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification.Q38294746
A carbon source-responsive promoter element necessary for activation of the isocitrate lyase gene ICL1 is common to genes of the gluconeogenic pathway in the yeast Saccharomyces cerevisiaeQ38307479
A yeast phosphofructokinase insensitive to the allosteric activator fructose 2,6-bisphosphate. Glycolysis/metabolic regulation/allosteric controlQ38355624
Multiple pathways are co-regulated by the protein kinase Snf1 and the transcription factors Adr1 and Cat8.Q38355889
Binding characteristics and regulatory mechanisms of the transcription factors controlling oleate-responsive genes in Saccharomyces cerevisiaeQ39782244
The Snf1 kinase controls glucose repression in yeast by modulating interactions between the Mig1 repressor and the Cyc8-Tup1 co-repressorQ40101007
Transcriptional regulation in the yeast GAL gene family: a complex genetic networkQ40439061
Manipulation of the 'zinc cluster' region of transcriptional activator LEU3 by site-directed mutagenesisQ40508330
Control of mRNA turnover as a mechanism of glucose repression in Saccharomyces cerevisiaeQ40655338
Key role of Ser562/661 in Snf1-dependent regulation of Cat8p in Saccharomyces cerevisiae and Kluyveromyces lactis.Q40815510
Evolution of a fungal regulatory gene family: the Zn(II)2Cys6 binuclear cluster DNA binding motifQ41589077
A review of phenotypes in Saccharomyces cerevisiaeQ41596007
The transcriptional coactivators SAGA, SWI/SNF, and mediator make distinct contributions to activation of glucose-repressed genesQ41680259
Transcriptional control of gluconeogenesis in Aspergillus nidulansQ41907298
Transcriptome profiling of Saccharomyces cerevisiae during a transition from fermentative to glycerol-based respiratory growth reveals extensive metabolic and structural remodelingQ42496340
Genetic and molecular characterization of GAL83: its interaction and similarities with other genes involved in glucose repression in Saccharomyces cerevisiae.Q42964331
Complex interplay among regulators of drug resistance genes in Saccharomyces cerevisiaeQ44881199
Yeast transcription factor Oaf1 forms homodimer and induces some oleate-responsive genes in absence of Pip2.Q46451394
Multiple transcripts regulate glucose-triggered mRNA decay of the lactate transporter JEN1 from Saccharomyces cerevisiae.Q46492537
Dissection of the promoter of theHAP4 gene inS. cerevisiae unveils a complex regulatory framework of transcriptional regulationQ58379919
Characterization of fructose 1,6-bisphosphatase from bakers' yeastQ70213690
Mechanisms regulating the transport of acetic acid in Saccharomyces cerevisiaeQ71251428
Glucose regulates protein interactions within the yeast SNF1 protein kinase complexQ71949214
The levels of yeast gluconeogenic mRNAs respond to environmental factorsQ72715504
The nuclear exportin Msn5 is required for nuclear export of the Mig1 glucose repressor of Saccharomyces cerevisiaeQ73168297
Carbon source-dependent transcriptional regulation of the mitochondrial glycerol-3-phosphate dehydrogenase gene, GUT2, from Saccharomyces cerevisiaeQ73355808
P433issue1
P921main subjectregulation of transcription from RNA polymerase II promoter by a nonfermentable carbon sourceQ22253611
positive regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon sourceQ22253612
negative regulation of transcription from RNA polymerase II promoter by a nonfermentable carbon sourceQ22253876
P304page(s)2-13
P577publication date2009-07-18
P1433published inFEMS Yeast ResearchQ15751211
P1476titleTranscriptional regulation of nonfermentable carbon utilization in budding yeast
P478volume10

Reverse relations

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