Construction and analysis of dysregulated lncRNA-associated ceRNA network identified novel lncRNA biomarkers for early diagnosis of human pancreatic cancer

scientific article published on 28 July 2016

Construction and analysis of dysregulated lncRNA-associated ceRNA network identified novel lncRNA biomarkers for early diagnosis of human pancreatic cancer is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.18632/ONCOTARGET.10891
P932PMC publication ID5302921
P698PubMed publication ID27487139

P50authorMeng ZhouQ56952218
Jie SunQ61101770
Liang ChengQ85886012
P2093author name stringYang Chen
Hengqiang Zhao
Zhiyong Diao
Xiaolong Yue
P2860cites workThe Hallmarks of CancerQ221226
Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot projectQ21061203
Significance analysis of microarrays applied to the ionizing radiation responseQ24606608
CREB up-regulates long non-coding RNA, HULC expression through interaction with microRNA-372 in liver cancerQ24610723
miRecords: an integrated resource for microRNA-target interactionsQ24655642
The multilayered complexity of ceRNA crosstalk and competitionQ27025671
Cancer statistics, 2013Q27860762
Exploration, normalization, and summaries of high density oligonucleotide array probe level dataQ27861098
The transcriptional landscape of the mammalian genomeQ27861110
Competing endogenous RNA networks: tying the essential knots for cancer biology and therapeuticsQ28088356
Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene listsQ28131785
The genetic association databaseQ29617244
Pancreatic cancerQ29622871
Construction and investigation of breast-cancer-specific ceRNA network based on the mRNA and miRNA expression dataQ30836091
Why do hubs tend to be essential in protein networks?Q33245657
Combined gene expression analysis of whole-tissue and microdissected pancreatic ductal adenocarcinoma identifies genes specifically overexpressed in tumor epithelia.Q33414759
A long non-coding RNA signature to improve prognosis prediction of colorectal cancerQ33688589
Enrichment map: a network-based method for gene-set enrichment visualization and interpretationQ33749961
Molecular signatures of pancreatic cancerQ33918801
Computational analysis identifies a sponge interaction network between long non-coding RNAs and messenger RNAs in human breast cancer.Q33962806
Gene regulation by the act of long non-coding RNA transcriptionQ34036993
Long noncoding RNA associated-competing endogenous RNAs in gastric cancerQ34048763
Graphic rule for drug metabolism systemsQ34113910
Extracellular matrix and cell signalling: the dynamic cooperation of integrin, proteoglycan and growth factor receptor.Q34163575
Applications of graph theory to enzyme kinetics and protein folding kinetics. Steady and non-steady-state systemsQ34207713
Prediction of Protein Structural ClassesQ34297604
A long non-coding RNA signature in glioblastoma multiforme predicts survival.Q34347963
Linc2GO: a human LincRNA function annotation resource based on ceRNA hypothesisQ34352870
Long non-coding RNAs: new players in cell differentiation and developmentQ34389273
LncRNA profile study reveals a three-lncRNA signature associated with the survival of patients with oesophageal squamous cell carcinomaQ34431243
iPro54-PseKNC: a sequence-based predictor for identifying sigma-54 promoters in prokaryote with pseudo k-tuple nucleotide compositionQ34579675
Pancreatic cancer biology and geneticsQ35013204
lnCeDB: database of human long noncoding RNA acting as competing endogenous RNAQ35187538
Parameter optimization for constructing competing endogenous RNA regulatory network in glioblastoma multiforme and other cancersQ35558977
Long non-coding RNA expression profiles predict metastasis in lymph node-negative breast cancer independently of traditional prognostic markersQ35559368
TarBase 6.0: capturing the exponential growth of miRNA targets with experimental supportQ35631073
A potential signature of eight long non-coding RNAs predicts survival in patients with non-small cell lung cancer.Q35857169
Identification and validation of potential prognostic lncRNA biomarkers for predicting survival in patients with multiple myeloma.Q36053910
A potential prognostic long non-coding RNA signature to predict metastasis-free survival of breast cancer patientsQ36262493
Expression profile of long non-coding RNAs in pancreatic cancer and their clinical significance as biomarkersQ36546434
The Emerging Function and Mechanism of ceRNAs in CancerQ36723203
Long non-coding RNA in cancerQ36790436
Hypoxia-induced lncRNA-NUTF2P3-001 contributes to tumorigenesis of pancreatic cancer by derepressing the miR-3923/KRAS pathwayQ36905828
Long noncoding RNAs and the genetics of cancer.Q36959100
Integrative genomic analyses reveal clinically relevant long noncoding RNAs in human cancerQ36986158
A potential panel of six-long non-coding RNA signature to improve survival prediction of diffuse large-B-cell lymphomaQ36996542
Characterization of long non-coding RNA-associated ceRNA network to reveal potential prognostic lncRNA biomarkers in human ovarian cancerQ37022234
ceRNA cross-talk in cancer: when ce-bling rivalries go awry.Q37241476
Integrative survival-based molecular profiling of human pancreatic cancerQ37276948
Relapse-related long non-coding RNA signature to improve prognosis prediction of lung adenocarcinomaQ37301923
Topological properties of protein interaction networks from a structural perspectiveQ37330462
Comprehensive analysis of lncRNA expression profiles reveals a novel lncRNA signature to discriminate nonequivalent outcomes in patients with ovarian cancerQ37362685
iROS-gPseKNC: Predicting replication origin sites in DNA by incorporating dinucleotide position-specific propensity into general pseudo nucleotide compositionQ37376225
iCar-PseCp: identify carbonylation sites in proteins by Monte Carlo sampling and incorporating sequence coupled effects into general PseAAC.Q37376337
iHyd-PseCp: Identify hydroxyproline and hydroxylysine in proteins by incorporating sequence-coupled effects into general PseAAC.Q37536872
IntNetLncSim: an integrative network analysis method to infer human lncRNA functional similarityQ37565302
iPhos-PseEn: identifying phosphorylation sites in proteins by fusing different pseudo components into an ensemble classifierQ37588275
miRTarBase update 2014: an information resource for experimentally validated miRNA-target interactionsQ37661923
Some remarks on protein attribute prediction and pseudo amino acid compositionQ37822128
Roles and mechanisms of microRNAs in pancreatic cancerQ37827435
The molecular and cellular heterogeneity of pancreatic ductal adenocarcinomaQ37969932
Impacts of bioinformatics to medicinal chemistryQ38303748
Post-transcriptional regulation of long noncoding RNAs in cancerQ38331266
Expression and prognostic significance of lncRNA MALAT1 in pancreatic cancer tissuesQ38996378
FKBP51 affects cancer cell response to chemotherapy by negatively regulating Akt.Q39803380
Extensive microRNA-mediated crosstalk between lncRNAs and mRNAs in mouse embryonic stem cellsQ40174562
An application of gene comparative image for predicting the effect on replication ratio by HBV virus gene missense mutationQ45453677
Clinico-pathological characteristics and clinical outcome of different histological types of pancreatic cancer in a large Middle European series.Q45902239
Prioritizing candidate disease-related long non-coding RNAs by walking on the heterogeneous lncRNA and disease networkQ47963852
Extracellular matrix composition significantly influences pancreatic stellate cell gene expression pattern: role of transgelin in PSC functionQ47979755
Role of Extracellular Matrix in Pancreatic DiseasesQ60609537
A computational frame and resource for understanding the lncRNA-environmental factor associations and prediction of environmental factors implicated in diseasesQ85764092
Inferring novel lncRNA-disease associations based on a random walk model of a lncRNA functional similarity networkQ87924735
P4510describes a project that usesCytoscapeQ3699942
P433issue35
P407language of work or nameEnglishQ1860
P921main subjectpancreatic cancerQ212961
biomarkerQ864574
diagnosisQ16644043
P304page(s)56383-56394
P577publication date2016-07-28
P1433published inOncotargetQ1573155
P1476titleConstruction and analysis of dysregulated lncRNA-associated ceRNA network identified novel lncRNA biomarkers for early diagnosis of human pancreatic cancer
P478volume7

Reverse relations

cites work (P2860)
Q42378366A potential panel of two-long non-coding RNA signature to predict recurrence of patients with laryngeal cancer
Q42128391A six-long non-coding RNAs signature as a potential prognostic marker for survival prediction of ER-positive breast cancer patients
Q48346788Aberrant Long Noncoding RNAs Expression Profiles Affect Cisplatin Resistance in Lung Adenocarcinoma.
Q33798794Accuracy of the urine UCA1 for diagnosis of bladder cancer: a meta-analysis
Q54537800An Immune-Related Six-lncRNA Signature to Improve Prognosis Prediction of Glioblastoma Multiforme.
Q47095221An integrated lncRNA, microRNA and mRNA signature to improve prognosis prediction of colorectal cancer
Q49406445Analysis of long non-coding RNA expression profiles identifies functional lncRNAs associated with the progression of acute coronary syndromes
Q42366572Analysis of long non-coding RNA expression profiles identifies novel lncRNA biomarkers in the tumorigenesis and malignant progression of gliomas
Q64906952Analysis of the miRNA and mRNA involved in osteogenesis of adipose-derived mesenchymal stem cells.
Q92191025CancerClock: A DNA Methylation Age Predictor to Identify and Characterize Aging Clock in Pan-Cancer
Q90706145Changing expression profiles of lncRNAs, circRNAs and mRNAs in esophageal squamous carcinoma
Q98771697Characterization of BRCA1/2-Directed ceRNA Network Identifies a Novel Three-lncRNA Signature to Predict Prognosis and Chemo-Response in Ovarian Cancer Patients With Wild-Type BRCA1/2
Q91975833Characterization of Dysregulated lncRNA-Associated ceRNA Network Reveals Novel lncRNAs With ceRNA Activity as Epigenetic Diagnostic Biomarkers for Osteoporosis Risk
Q37699208Comprehensive analysis of aberrantly expressed profiles of lncRNAs and miRNAs with associated ceRNA network in muscle-invasive bladder cancer
Q64123780Comprehensive analysis of competitive endogenous RNAs network associated with head and neck squamous cell carcinoma
Q55383227Comprehensive analysis of differentially expressed profiles of lncRNAs and mRNAs reveals ceRNA networks in the transformation of diffuse large B-cell lymphoma.
Q45943371Computer-aided biomarker discovery for precision medicine: data resources, models and applications.
Q95841100Construction and Analysis of a ceRNA Network Reveals Potential Prognostic Markers in Colorectal Cancer
Q64113575Construction and analysis of a spinal cord injury competitive endogenous RNA network based on the expression data of long noncoding, micro‑ and messenger RNAs
Q64904237Detection of dysregulated competing endogenous RNA modules associated with clear cell kidney carcinoma.
Q50047564Downregulation of the long non-coding RNA XLOC_010588 inhibits the invasion and migration of colorectal cancer
Q43451695Expression profiles analysis of long non-coding RNAs identified novel lncRNA biomarkers with predictive value in outcome of cutaneous melanoma
Q42366627Expression profiles analysis reveals an integrated miRNA-lncRNA signature to predict survival in ovarian cancer patients with wild-type BRCA1/2
Q59799181Functional Long Noncoding RNAs (lncRNAs) in Clear Cell Kidney Carcinoma Revealed by Reconstruction and Comprehensive Analysis of the lncRNA-miRNA-mRNA Regulatory Network
Q49993926Genome-Wide Analysis Identified a Number of Dysregulated Long Noncoding RNA (lncRNA) in Human Pancreatic Ductal Adenocarcinoma
Q89966111Germ Cell-Specific Gene 1-Like Protein Regulated by Splicing Factor CUGBP Elav-Like Family Member 5 and Primary Bile Acid Biosynthesis are Prognostic in Glioblastoma Multiforme
Q92539523Identification and Validation of an Immune-Related RNA Signature to Predict Survival of Patients With Head and Neck Squamous Cell Carcinoma
Q92391816Identification and development of long non-coding RNA-associated regulatory network in colorectal cancer
Q49591680Identification of a progression-associated long non-coding RNA signature for predicting the prognosis of lung squamous cell carcinoma
Q54963939Identification of cancer-related miRNA-lncRNA biomarkers using a basic miRNA-lncRNA network.
Q90364550Identification of lncRNA-miRNA-mRNA regulatory network associated with primary open angle glaucoma
Q42317549Identification of long non-coding RNAs biomarkers for early diagnosis of myocardial infarction from the dysregulated coding-non-coding co-expression network
Q41233998Identification of novel long non-coding RNA biomarkers for prognosis prediction of papillary thyroid cancer
Q44279014Identification of potential long non-coding RNA biomarkers associated with the progression of colon cancer
Q47155278Identification of potential prognostic ceRNA module biomarkers in patients with pancreatic adenocarcinoma
Q64271508Identification of prognostic biomarkers of prostate cancer with long non-coding RNA-mediated competitive endogenous RNA network
Q90152277Identifying Dysregulated lncRNA-Associated ceRNA Network Biomarkers in CML Based on Dynamical Network Biomarkers
Q90308558Integrative analysis of competing endogenous RNA networks reveals the functional lncRNAs in heart failure
Q91893511LINC01006 promotes cell proliferation and metastasis in pancreatic cancer via miR-2682-5p/HOXB8 axis
Q40056796Linc-ing Circulating Long Non-coding RNAs to the Diagnosis and Malignant Prediction of Intraductal Papillary Mucinous Neoplasms of the Pancreas.
Q97538084LncRNA CRNDE modulates cardiac progenitor cells' proliferation and migration via the miR-181a/LYRM1 axis in hypoxia
Q89798445LncRNA NEAT1/miR-185-5p/IGF2 axis regulates the invasion and migration of colon cancer
Q96348589LncRNA SNHG4 promotes osteosarcoma proliferation and migration by sponging miR-377-3p
Q47329036Long non-coding RNA CCAT1 promotes multiple myeloma progression by acting as a molecular sponge of miR-181a-5p to modulate HOXA1 expression
Q92133481Long non-coding RNA HULC as a diagnostic and prognostic marker of pancreatic cancer
Q52657624Long non-coding RNA MIAT in development and disease: a new player in an old game.
Q47143921Long non-coding RNA NEAT1 regulates E2F3 expression by competitively binding to miR-377 in non-small cell lung cancer
Q42378413Long non-coding RNA NEAT1 regulates epithelial membrane protein 2 expression to repress nasopharyngeal carcinoma migration and irradiation-resistance through miR-101-3p as a competing endogenous RNA mechanism
Q90081437Long noncoding RNA GSTM3TV2 upregulates LAT2 and OLR1 by competitively sponging let-7 to promote gemcitabine resistance in pancreatic cancer
Q33559988Meta-signature LncRNAs serve as novel biomarkers for colorectal cancer: integrated bioinformatics analysis, experimental validation and diagnostic evaluation
Q90316885MicroRNA hsa-mir-3923 serves as a diagnostic and prognostic biomarker for gastric carcinoma
Q38431931Microarray analysis reveals differentially expressed lncRNAs in benign epithelial ovarian cysts and normal ovaries
Q93190399RNA-Seq Data-Mining Allows the Discovery of Two Long Non-Coding RNA Biomarkers of Viral Infection in Humans
Q90216487Reconstruction and analysis of competitive endogenous RNA network reveals regulatory role of long non‑coding RNAs in hepatic fibrosis
Q38433991Reconstruction and analysis of the lncRNA-miRNA-mRNA network based on competitive endogenous RNA reveal functional lncRNAs in rheumatoid arthritis
Q54977978Regulatory interactions between long noncoding RNA LINC00968 and miR-9-3p in non-small cell lung cancer: A bioinformatic analysis based on miRNA microarray, GEO and TCGA.
Q37716538Relationship between LINC00341 expression and cancer prognosis
Q98943923SNHG17 drives malignant behaviors in astrocytoma by targeting miR-876-5p/ERLIN2 axis
Q59128537Systematic analysis of lncRNA-miRNA-mRNA competing endogenous RNA network identifies four-lncRNA signature as a prognostic biomarker for breast cancer
Q42378461The lncRNA HOXA11-AS functions as a competing endogenous RNA to regulate PADI2 expression by sponging miR-125a-5p in liver metastasis of colorectal cancer
Q55032248Three-lncRNA signature is a potential prognostic biomarker for pancreatic adenocarcinoma.

Search more.