Maintaining cell identity through global control of genomic organization

scientific article published on July 2010

Maintaining cell identity through global control of genomic organization is …
instance of (P31):
scholarly articleQ13442814
review articleQ7318358

External links are
P356DOI10.1016/J.IMMUNI.2010.07.006
P698PubMed publication ID20643336

P50authorGioacchino NatoliQ55121984
P2860cites workCommitment to the B-lymphoid lineage depends on the transcription factor Pax5Q22010683
Long-term in vivo reconstitution of T-cell development by Pax5-deficient B-cell progenitorsQ22010684
Interchromosomal associations between alternatively expressed lociQ22122480
P433issue1
P407language of work or nameEnglishQ1860
P304page(s)12-24
P577publication date2010-07-01
P1433published inImmunityQ6005457
P1476titleMaintaining cell identity through global control of genomic organization
P478volume33

Reverse relations

cites work (P2860)
Q35104157A dual cis-regulatory code links IRF8 to constitutive and inducible gene expression in macrophages
Q61799565Aberrant DNA methylation of M1-macrophage genes in coronary artery disease
Q35108215Application of ChIP-Seq and related techniques to the study of immune function
Q35113568Bacterial artificial chromosomes as analytical basis for gene transcriptional machineries
Q42683276Breast Cancer Vaccines: New Insights
Q30935846Cell-composition effects in the analysis of DNA methylation array data: a mathematical perspective.
Q34024936ChIP-Seq: technical considerations for obtaining high-quality data
Q36591701Characterising the epigenome as a key component of the fetal exposome in evaluating in utero exposures and childhood cancer risk.
Q26801740Chromatin Dynamics in Lineage Commitment and Cellular Reprogramming
Q26796578Chromatin Remodeling and Transcriptional Control in Innate Immunity: Emergence of Akirin2 as a Novel Player
Q38199995Chromatin dynamics: H3K4 methylation and H3 variant replacement during development and in cancer.
Q38007358Chromatin signatures of active enhancers
Q33580677Coordinated control of terminal differentiation and restriction of cellular plasticity
Q33723246Coregulation of transcription factor binding and nucleosome occupancy through DNA features of mammalian enhancers.
Q55419712Current Advances on the Important Roles of Enhancer RNAs in Gene Regulation and Cancer.
Q33761454Cytomegalovirus latency and reactivation: recent insights into an age old problem
Q38558521DNA Methylation in Whole Blood: Uses and Challenges.
Q30530775DNA methylation arrays as surrogate measures of cell mixture distribution
Q38104721Deciphering cis-regulatory control in inflammatory cells
Q36405942Decreased NK cells in patients with head and neck cancer determined in archival DNA.
Q34360404Diagnostic biomarkers are hidden in the infected host's epigenome
Q34224069Direct lineage conversions: unnatural but useful?
Q90145420Diversity, Mechanisms, and Significance of Macrophage Plasticity
Q42136153Dynamic transformations of genome-wide epigenetic marking and transcriptional control establish T cell identity
Q38091752Epidermal stem cells: an update on their potential in regenerative medicine
Q39067401Epigenetic and Transcriptional Regulation of IRAK-M Expression in Macrophages
Q40653876Epigenetic epidemiology as a tool to understand the role of immunity in chronic disease
Q36471772Epigenetic modifications and diabetic nephropathy.
Q35012703Epigenetic regulation in alcoholic liver disease.
Q41620454Epigenetic regulation in sepsis : current state of knowledge
Q38045305Epigenetic regulation of B lymphocyte differentiation, transdifferentiation, and reprogramming.
Q38065485Epigenetic regulation of macrophage polarization and function
Q35027853Epigenomics and the microbiota
Q60300338Ezh2 programs T differentiation by integrating phosphorylation-dependent activation of Bcl6 and polycomb-dependent repression of p19Arf
Q36383859Foxp3 exploits a pre-existent enhancer landscape for regulatory T cell lineage specification
Q47150465Genome-wide identification of inter-individually variable DNA methylation sites improves the efficacy of epigenetic association studies.
Q24628039Genomic views of STAT function in CD4+ T helper cell differentiation
Q35422275H3K4 tri-methylation provides an epigenetic signature of active enhancers
Q36706314HIV Skews the Lineage-Defining Transcriptional Profile of Mycobacterium tuberculosis-Specific CD4+ T Cells.
Q34356521Helper T cell plasticity: impact of extrinsic and intrinsic signals on transcriptomes and epigenomes
Q36623362Helper T-cell identity and evolution of differential transcriptomes and epigenomes.
Q92525522Hematopoietic stem and progenitor cell proliferation and differentiation requires the trithorax protein Ash2l
Q37902866Hierarchies of NF-κB target-gene regulation
Q34043754High-throughput and quantitative assessment of enhancer activity in mammals by CapStarr-seq.
Q34594554High-throughput chromatin immunoprecipitation for genome-wide mapping of in vivo protein-DNA interactions and epigenomic states
Q35624730Histone deacetylase 3 is an epigenomic brake in macrophage alternative activation.
Q89726455Histone hyperacetylation mediates enhanced IL-1β production in LPS/IFN-γ-stimulated macrophages
Q37606976Inflammation and epigenetic regulation in osteoarthritis
Q36322871Influences of the Gut Microbiota on DNA Methylation and Histone Modification.
Q97883538Inhibiting DNA Methylation Improves Survival in Severe Sepsis by Regulating NF-κB Pathway
Q42513727Interferon-γ Represses M2 Gene Expression in Human Macrophages by Disassembling Enhancers Bound by the Transcription Factor MAF.
Q92086508Interplay between FACT subunit SPT16 and TRIM33 can remodel chromatin at macrophage distal regulatory elements
Q90242239KLF4 is involved in the organization and regulation of pluripotency-associated three-dimensional enhancer networks
Q38088936Leveling Waddington: the emergence of direct programming and the loss of cell fate hierarchies.
Q34045921Lineage-specific enhancers activate self-renewal genes in macrophages and embryonic stem cells
Q38000671Living with the enemy or uninvited guests: functional genomics approaches to investigating host resistance or tolerance traits to a protozoan parasite, Theileria annulata, in cattle
Q64914590Macrophage Polarization in the Development and Progression of Ovarian Cancers: An Overview.
Q27007092Macrophages: gatekeepers of tissue integrity
Q35915068Mechanisms of Jak/STAT signaling in immunity and disease
Q42174132Mechanisms of in vivo binding site selection of the hematopoietic master transcription factor PU.1.
Q41159372Multi-tiered Reorganization of the Genome during B Cell Affinity Maturation Anchored by a Germinal Center-Specific Locus Control Region
Q38594326Multilineage priming of enhancer repertoires precedes commitment to the B and myeloid cell lineages in hematopoietic progenitors.
Q34352790NF-κB and IRF7 pathway activation by Epstein-Barr virus Latent Membrane Protein 1
Q37995685NF-κB and chromatin: ten years on the path from basic mechanisms to candidate drugs
Q38392308NF-κB induction of the SUMO protease SENP2: A negative feedback loop to attenuate cell survival response to genotoxic stress.
Q30883752Normal cell-type epigenetics and breast cancer classification: a case study of cell mixture-adjusted analysis of DNA methylation data from tumors
Q58569394Pancreatic islet-autonomous insulin and smoothened-mediated signalling modulate identity changes of glucagon α-cells
Q38275663Promoter or enhancer, what's the difference? Deconstruction of established distinctions and presentation of a unifying model.
Q35085959Reference-free cell mixture adjustments in analysis of DNA methylation data
Q36064451Reference-free deconvolution of DNA methylation data and mediation by cell composition effects.
Q89433986Reprogramming of basic metabolic pathways in microbial sepsis: therapeutic targets at last?
Q36431152STATs shape the active enhancer landscape of T cell populations
Q46706123Short-term memory of danger signals and environmental stimuli in immune cells
Q26861020Super-enhancers: Asset management in immune cell genomes
Q37915404T-cell identity and epigenetic memory
Q98209170Targeted Bisulfite Sequencing for Biomarker Discovery
Q36917751Tcf1 and Lef1 transcription factors establish CD8(+) T cell identity through intrinsic HDAC activity
Q41998237The B-cell identity factor Pax5 regulates distinct transcriptional programmes in early and late B lymphopoiesis
Q37829811The genomic landscapes of inflammation.
Q38239862The role of chromatin dynamics in immune cell development
Q38926320The therapeutic potential of epigenetic manipulation during infectious diseases.
Q83231212The transcription factor Hey and nuclear lamins specify and maintain cell identity
Q90495142The transcription factor PU.1 mediates enhancer-promoter looping that is required for IL-1β eRNA and mRNA transcription in mouse melanoma and macrophage cell lines
Q47149143The transcription factor Runx3 guards cytotoxic CD8+ effector T cells against deviation towards follicular helper T cell lineage.
Q64982873Tissue-Specific Control of Tissue-Resident Memory T Cells.
Q90099425Transcription Factor-Directed Re-wiring of Chromatin Architecture for Somatic Cell Nuclear Reprogramming toward trans-Differentiation
Q26859465Transcription factors and CD4 T cells seeking identity: masters, minions, setters and spikers
Q57464773Transcription-factor-mediated supervision of global genome architecture maintains B cell identity
Q34245251Transcriptional and epigenetic control of T helper cell specification: molecular mechanisms underlying commitment and plasticity.
Q35548956Transcriptional control of inflammatory responses
Q37939620Transcriptional control of macrophage diversity and specialization
Q39350743Transcriptional determination and functional specificity of myeloid cells: making sense of diversity
Q60305742Transcriptional profiling identifies novel regulators of macrophage polarization
Q37949245Transcriptional regulation of macrophage polarization: enabling diversity with identity
Q38212817Unconventional post-translational modifications in immunological signaling
Q33865023Widespread Mitotic Bookmarking by Histone Marks and Transcription Factors in Pluripotent Stem Cells

Search more.