review article | Q7318358 |
scholarly article | Q13442814 |
P2093 | author name string | John B Hogenesch | |
Hiroki R Ueda | |||
P2860 | cites work | Network features of the mammalian circadian clock | Q21563545 |
Disruption of retinoid-related orphan receptor beta changes circadian behavior, causes retinal degeneration and leads to vacillans phenotype in mice | Q24533269 | ||
Circadian clocks in human red blood cells | Q24620753 | ||
CLOCK and NPAS2 have overlapping roles in the suprachiasmatic circadian clock | Q24650981 | ||
The in vitro real-time oscillation monitoring system identifies potential entrainment factors for circadian clocks. | Q25256792 | ||
Functional profiling of the Saccharomyces cerevisiae genome | Q27860544 | ||
Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis | Q27860815 | ||
CKIepsilon/delta-dependent phosphorylation is a temperature-insensitive, period-determining process in the mammalian circadian clock | Q27865241 | ||
The VPAC(2) receptor is essential for circadian function in the mouse suprachiasmatic nuclei | Q28207565 | ||
The orphan nuclear receptor REV-ERBalpha controls circadian transcription within the positive limb of the mammalian circadian oscillator | Q28216502 | ||
A clock shock: mouse CLOCK is not required for circadian oscillator function | Q28238302 | ||
A predictive model of the oxygen and heme regulatory network in yeast | Q28473966 | ||
A sequential program of dual phosphorylation of KaiC as a basis for circadian rhythm in cyanobacteria | Q28485565 | ||
Reconstitution of circadian oscillation of cyanobacterial KaiC phosphorylation in vitro | Q28485571 | ||
Differential functions of mPer1, mPer2, and mPer3 in the SCN circadian clock | Q28509438 | ||
Delay in feedback repression by cryptochrome 1 is required for circadian clock function | Q28512076 | ||
Mammalian Cry1 and Cry2 are essential for maintenance of circadian rhythms | Q28584936 | ||
Altered patterns of sleep and behavioral adaptability in NPAS2-deficient mice | Q28588185 | ||
Mop3 is an essential component of the master circadian pacemaker in mammals | Q28591939 | ||
Circadian rhythms and memory: not so simple as cogs and gears | Q28752225 | ||
A synthetic oscillatory network of transcriptional regulators | Q29547344 | ||
A functional genomics strategy reveals Rora as a component of the mammalian circadian clock | Q29616297 | ||
The meter of metabolism | Q29619740 | ||
Intercellular coupling confers robustness against mutations in the SCN circadian clock network | Q30543329 | ||
A Bayesian framework for combining heterogeneous data sources for gene function prediction (in Saccharomyces cerevisiae). | Q30806988 | ||
Targeted disruption of the mPer3 gene: subtle effects on circadian clock function | Q30901003 | ||
Advancing post-genome data and system integration through machine learning | Q31162613 | ||
Characterization of unknown adult stem cell samples by large scale data integration and artificial neural networks. | Q33408220 | ||
Network-free inference of knockout effects in yeast | Q33523272 | ||
Discovering transcriptional modules by Bayesian data integration | Q33597293 | ||
The molecular clockwork of a protein-based circadian oscillator | Q33604973 | ||
Nucleotide binding and autophosphorylation of the clock protein KaiC as a circadian timing process of cyanobacteria | Q33885396 | ||
Molecular mechanism of temperature sensing by the circadian clock of Neurospora crassa | Q33942697 | ||
Temperature as a universal resetting cue for mammalian circadian oscillators | Q34143703 | ||
Cyanobacterial circadian clockwork: roles of KaiA, KaiB and the kaiBC promoter in regulating KaiC | Q34194360 | ||
KaiB functions as an attenuator of KaiC phosphorylation in the cyanobacterial circadian clock system. | Q34194369 | ||
No transcription-translation feedback in circadian rhythm of KaiC phosphorylation | Q34369194 | ||
A detailed predictive model of the mammalian circadian clock | Q34385605 | ||
Thermally regulated translational control of FRQ mediates aspects of temperature responses in the neurospora circadian clock | Q34426048 | ||
Signal processing in cellular clocks | Q34693749 | ||
ATPase activity of KaiC determines the basic timing for circadian clock of cyanobacteria | Q34694770 | ||
Long and short isoforms of Neurospora clock protein FRQ support temperature-compensated circadian rhythms | Q34718029 | ||
Altered behavioral rhythms and clock gene expression in mice with a targeted mutation in the Period1 gene | Q34729382 | ||
A circadian clock in Neurospora: how genes and proteins cooperate to produce a sustained, entrainable, and compensated biological oscillator with a period of about a day | Q34784363 | ||
Circadian gene expression in mammalian fibroblasts revealed by real-time luminescence reporting: temperature compensation and damping. | Q34795619 | ||
The regulatory utilization of genetic redundancy through responsive backup circuits | Q34805700 | ||
Structural insights into a circadian oscillator | Q34869684 | ||
How a cyanobacterium tells time | Q34872329 | ||
A role for casein kinase 2 in the mechanism underlying circadian temperature compensation | Q34981570 | ||
Estimation of mean body temperature from mean skin and core temperature | Q35546741 | ||
Small-scale copy number variation and large-scale changes in gene expression. | Q36954927 | ||
A chemical biology approach reveals period shortening of the mammalian circadian clock by specific inhibition of GSK-3beta | Q37023129 | ||
Complexity of the Neurospora crassa circadian clock system: multiple loops and oscillators. | Q37141048 | ||
Circadian clock genes and sleep homeostasis. | Q37497516 | ||
Role of KaiC phosphorylation in the circadian clock system of Synechococcus elongatus PCC 7942. | Q37535587 | ||
Identification of key phosphorylation sites in the circadian clock protein KaiC by crystallographic and mutagenetic analyses | Q37535591 | ||
A time to fast, a time to feast: the crosstalk between metabolism and the circadian clock | Q37588515 | ||
Metabolism and circadian rhythms--implications for obesity | Q37621141 | ||
ON THE MECHANISM OF TEMPERATURE INDEPENDENCE IN A BIOLOGICAL CLOCK. | Q37689932 | ||
Mammalian Per-Arnt-Sim proteins in environmental adaptation | Q37690733 | ||
Ordered phosphorylation governs oscillation of a three-protein circadian clock | Q39144220 | ||
Autonomous synchronization of the circadian KaiC phosphorylation rhythm | Q39274167 | ||
Quantitative genome-wide analysis of yeast deletion strain sensitivities to oxidative and chemical stress. | Q39776817 | ||
Synchronization of circadian oscillation of phosphorylation level of KaiC in vitro. | Q40778160 | ||
Circadian gating of the cell cycle revealed in single cyanobacterial cells | Q41849818 | ||
Transcription control reprogramming in genetic backup circuits | Q42648483 | ||
Temperature Compensation of Circadian Period Length in Clock Mutants of Neurospora crassa | Q46666304 | ||
Natural selection favors a newly derived timeless allele in Drosophila melanogaster | Q47070309 | ||
How temperature changes reset a circadian oscillator | Q47725740 | ||
The mPer2 gene encodes a functional component of the mammalian circadian clock | Q47946668 | ||
Circadian clocks: genes, sleep, and cognition | Q48224921 | ||
Alternative pathway approach for automating analysis and validation of cell perturbation networks and design of perturbation experiments. | Q50893618 | ||
Studying genetic regulatory networks at the molecular level: delayed reaction stochastic models. | Q51920734 | ||
A generalized model of the repressilator. | Q51934061 | ||
A simpler model of the human circadian pacemaker. | Q52082705 | ||
A model for circadian oscillations in the Drosophila period protein (PER). | Q52329422 | ||
Natural variation in a Drosophila clock gene and temperature compensation. | Q52560702 | ||
Cyanobacterial circadian pacemaker: Kai protein complex dynamics in the KaiC phosphorylation cycle in vitro. | Q53610012 | ||
Peripheral circadian oscillators require CLOCK | Q59102208 | ||
Chemical Oscillations, Waves, and Turbulence | Q60608903 | ||
Linkage disequilibrium, mutational analysis and natural selection in the repetitive region of the clock gene, period, in Drosophila melanogaster | Q77225350 | ||
P433 | issue | 6 | |
P304 | page(s) | 407-416 | |
P577 | publication date | 2011-05-10 | |
P1433 | published in | Nature Reviews Genetics | Q1071824 |
P1476 | title | Understanding systems-level properties: timely stories from the study of clocks | |
P478 | volume | 12 |
Q42578914 | A Statistical Approach Reveals Designs for the Most Robust Stochastic Gene Oscillators |
Q34203771 | A mammalian circadian clock model incorporating daytime expression elements |
Q91874661 | A mobile ELF4 delivers circadian temperature information from shoots to roots |
Q54253935 | A quantitative study of the diversity of stripe-forming processes in an arthropod cell-based field undergoing axis formation and growth. |
Q37556701 | CGDB: a database of circadian genes in eukaryotes |
Q48384545 | CHRONO integrates behavioral stress and epigenetic control of metabolism |
Q28541855 | Cell type-specific functions of period genes revealed by novel adipocyte and hepatocyte circadian clock models |
Q29616556 | Central and peripheral circadian clocks in mammals |
Q47147580 | CirGRDB: a database for the genome-wide deciphering circadian genes and regulators |
Q55221813 | Circadian Regulation of Horticultural Traits: Integration of Environmental Signals |
Q33687817 | Circadian redox and metabolic oscillations in mammalian systems |
Q26830079 | Circadian rhythms and mood: opportunities for multi-level analyses in genomics and neuroscience: circadian rhythm dysregulation in mood disorders provides clues to the brain's organizing principles, and a touchstone for genomics and neuroscience |
Q26796457 | Circadian systems biology: When time matters |
Q27324401 | Clk post-transcriptional control denoises circadian transcription both temporally and spatially |
Q31053995 | Complex dynamics of transcription regulation |
Q36506747 | DNA methylation changes induced by long and short photoperiods in Nasonia. |
Q42774778 | Deep analysis of wild Vitis flower transcriptome reveals unexplored genome regions associated with sex specification |
Q47644252 | Design Principles of Phosphorylation-Dependent Timekeeping in Eukaryotic Circadian Clocks |
Q42013940 | Development of a configurable growth chamber with a computer vision system to study circadian rhythm in plants |
Q35197952 | Dynamic fluctuations lubricate the circadian clock |
Q31161489 | Expressions of tight junction proteins Occludin and Claudin-1 are under the circadian control in the mouse large intestine: implications in intestinal permeability and susceptibility to colitis |
Q34447664 | Gene and genome parameters of mammalian liver circadian genes (LCGs). |
Q36281998 | Heat shock antagonizes UVA-induced responses in murine melanocytes and melanoma cells: an unexpected interaction |
Q64263896 | Heat the Clock: Entrainment and Compensation in Circadian Rhythms |
Q34831729 | Hepatocyte circadian clock controls acetaminophen bioactivation through NADPH-cytochrome P450 oxidoreductase |
Q36567973 | Histone methyltransferase MLL3 contributes to genome-scale circadian transcription |
Q21563355 | Hsp70-Hsp40 chaperone complex functions in controlling polarized growth by repressing Hsf1-driven heat stress-associated transcription |
Q92332181 | Human Circadian Molecular Oscillation Development Using Induced Pluripotent Stem Cells |
Q47113700 | Integration of omics sciences to advance biology and medicine. |
Q27302139 | Integrative gene regulatory network analysis reveals light-induced regional gene expression phase shift programs in the mouse suprachiasmatic nucleus |
Q41269902 | Involvement of posttranscriptional regulation of Clock in the emergence of circadian clock oscillation during mouse development. |
Q36184574 | It is time to take timing seriously in clinical genetics |
Q28080813 | Manipulating the circadian and sleep cycles to protect against metabolic disease |
Q26822588 | Mathematical models light up plant signaling |
Q41468335 | Metabolic compensation of the Neurospora clock by a glucose-dependent feedback of the circadian repressor CSP1 on the core oscillator |
Q35843886 | Mining for novel candidate clock genes in the circadian regulatory network |
Q35646078 | Minireview: NAD+, a circadian metabolite with an epigenetic twist |
Q34340587 | Molecular components of the Mammalian circadian clock |
Q45900104 | Nuclear magnetic resonance spectroscopy of the circadian clock of cyanobacteria. |
Q57819256 | Ocular Clocks: Adapting Mechanisms for Eye Functions and Health |
Q37978338 | Paradoxical and bidirectional drug effects |
Q37245968 | Photoreceptor phagocytosis is mediated by phosphoinositide signaling |
Q34525869 | Prevalence of cycling genes and drug targets calls for prospective chronotherapeutics |
Q41845617 | Progressive promoter element combinations classify conserved orthogonal plant circadian gene expression modules |
Q35926212 | Quantitative Circadian Phosphoproteomic Analysis of Arabidopsis Reveals Extensive Clock Control of Key Components in Physiological, Metabolic, and Signaling Pathways. |
Q36342514 | Rhythmic ring-ring stacking drives the circadian oscillator clockwise |
Q36267822 | Robust network topologies for generating oscillations with temperature-independent periods |
Q28542772 | Role for circadian clock genes in seasonal timing: testing the Bünning hypothesis |
Q35672364 | Suppressing the Neurospora crassa circadian clock while maintaining light responsiveness in continuous stirred tank reactors |
Q92783475 | Synchronization of the Normal Human Peripheral Immune System: A Comprehensive Circadian Systems Immunology Analysis |
Q34551665 | Systems Biology-Derived Discoveries of Intrinsic Clocks |
Q26745770 | TRP channels: a missing bond in the entrainment mechanism of peripheral clocks throughout evolution |
Q36455066 | The Circadian Clock Gene Period1 Connects the Molecular Clock to Neural Activity in the Suprachiasmatic Nucleus |
Q92702982 | The Molecular Evolution of Circadian Clock Genes in Spotted Gar (Lepisosteus oculatus) |
Q24602082 | The clock gene circuit in Arabidopsis includes a repressilator with additional feedback loops |
Q38055661 | The clock shop: coupled circadian oscillators. |
Q41958218 | The free energy cost of accurate biochemical oscillations |
Q47282821 | Thermodynamic Aspects and Reprogramming Cellular Energy Metabolism during the Fibrosis Process |
Q34168506 | Transcriptional activity and nuclear localization of Cabut, the Drosophila ortholog of vertebrate TGF-β-inducible early-response gene (TIEG) proteins |
Q29616252 | Transcriptional architecture and chromatin landscape of the core circadian clock in mammals |
Q33875579 | Transcriptional regulation of LUX by CBF1 mediates cold input to the circadian clock in Arabidopsis |
Q52798114 | [Clock and molecular genetics in Drosophila]. |