Genetic diversity and recombination analysis of sweepoviruses from Brazil.

scientific article published on 20 October 2012

Genetic diversity and recombination analysis of sweepoviruses from Brazil. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1186/1743-422X-9-241
P932PMC publication ID3485178
P698PubMed publication ID23082767

P50authorJesús Navas-CastilloQ40231528
Leonardo C AlbuquerqueQ42610272
P2093author name stringEnrique Moriones
Alice K Inoue-Nagata
Renato O Resende
Bruna Pinheiro
P2860cites workMUSCLE: multiple sequence alignment with high accuracy and high throughputQ24613456
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony MethodsQ27860929
Possible emergence of new geminiviruses by frequent recombinationQ73278372
Avoidance of protein fold disruption in natural virus recombinantsQ28471671
Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombinationQ29616724
Analyzing the mosaic structure of genesQ29616749
CLUSTAL V: improved software for multiple sequence alignmentQ29617279
RDP3: a flexible and fast computer program for analyzing recombinationQ29617754
Recombination, decreased host specificity and increased mobility may have driven the emergence of maize streak virus as an agricultural pathogen.Q33364361
Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequencesQ33389642
Genomic diversity of sweet potato geminiviruses in a Brazilian germplasm bankQ33452203
Cassava mosaic geminiviruses: actual knowledge and perspectives.Q33495358
Distinct evolutionary histories of the DNA-A and DNA-B components of bipartite begomovirusesQ33551042
Sweepoviruses cause disease in sweet potato and related Ipomoea spp.: fulfilling Koch's postulates for a divergent group in the genus begomovirusQ34071928
A simple method for cloning the complete begomovirus genome using the bacteriophage phi29 DNA polymerase.Q34291765
An exact nonparametric method for inferring mosaic structure in sequence tripletsQ35846218
Exploiting chinks in the plant's armor: evolution and emergence of geminivirusesQ36217869
Genetic analysis of maize streak virus isolates from Uganda reveals widespread distribution of a recombinant variantQ38877355
The role of AV2 ("precoat") and coat protein in viral replication and movement in tomato leaf curl geminivirusQ39332940
DNA forms indicate rolling circle and recombination-dependent replication of Abutilon mosaic virusQ39646012
Widely conserved recombination patterns among single-stranded DNA viruses.Q42036258
Detection and frequency of recombination in tomato-infecting begomoviruses of South and Southeast AsiaQ42218854
A novel monopartite begomovirus infecting sweet potato in Brazil.Q42601611
Molecular characterization of sweet potato leaf curl virus isolate from China (SPLCV-CN) and its phylogenetic relationship with other members of the GeminiviridaeQ42612866
Novel begomovirus species of recombinant nature in sweet potato (Ipomoea batatas) and Ipomoea indica: taxonomic and phylogenetic implicationsQ42624104
A natural recombinant between the geminiviruses Tomato yellow leaf curl Sardinia virus and Tomato yellow leaf curl virus exhibits a novel pathogenic phenotype and is becoming prevalent in Spanish populations.Q42691149
Begomovirus genetic diversity in the native plant reservoir Solanum nigrum: Evidence for the presence of a new virus species of recombinant natureQ43897892
Distribution and diversity of geminiviruses in trinidad and tobagoQ44486047
Genetic diversity of sweet potato begomoviruses in the United States and identification of a natural recombinant between sweet potato leaf curl virus and sweet potato leaf curl Georgia virusQ45369282
Analysis of the nucleotide sequence of the treehopper-transmitted geminivirus, tomato pseudo-curly top virus, suggests a recombinant originQ45770675
Two proteins of a plant DNA virus coordinate nuclear and plasmodesmal transportQ45779386
RDP: detection of recombination amongst aligned sequencesQ46776083
The effect of recombination on the accuracy of phylogeny estimationQ47584013
Multiple infection, recombination and genome relationships among begomovirus isolates found in cotton and other plants in PakistanQ47851832
Frequent occurrence of recombinants in mixed infections of tomato yellow leaf curl disease-associated begomovirusesQ48079852
Geminivirus strain demarcation and nomenclatureQ48685861
Begomovirus 'melting pot' in the south-west Indian Ocean islands: molecular diversity and evolution through recombination.Q51699021
An iteron-related domain is associated to Motif 1 in the replication proteins of geminiviruses: identification of potential interacting amino acid-base pairs by a comparative approach.Q52592001
A Modified Bootscan Algorithm for Automated Identification of Recombinant Sequences and Recombination BreakpointsQ56878359
Virology division news : Revision of taxonomic criteria for species demarcation in the family Geminiviridae , and an updated list of begomovirus speciesQ57560075
Geminivirus replication origins have a group-specific organization of iterative elements: a model for replicationQ72207367
P921main subjectBrazilQ155
genetic diversityQ585259
P304page(s)241
P577publication date2012-10-20
P1433published inVirology JournalQ7934868
P1476titleGenetic diversity and recombination analysis of sweepoviruses from Brazil
P478volume9