Conjugative and mobilizable genomic islands in bacteria: evolution and diversity.

scientific article published on 27 January 2014

Conjugative and mobilizable genomic islands in bacteria: evolution and diversity. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1111/1574-6976.12058
P698PubMed publication ID24372381
P5875ResearchGate publication ID259488734

P50authorGérard GuédonQ41783072
Sophie PayotQ42890040
Nathalie Leblond-BourgetQ47161642
Xavier BellangerQ59439961
P2093author name stringSophie Payot
Nathalie Leblond-Bourget
Gérard Guédon
Xavier Bellanger
P2860cites workICESp2905, the erm(TR)-tet(O) element of Streptococcus pyogenes, is formed by two independent integrative and conjugative elementsQ40327655
Sequence analysis of the mobile genome island pKLC102 of Pseudomonas aeruginosa CQ40387879
Unconstrained bacterial promiscuity: the Tn916–Tn1545 family of conjugative transposonsQ40466981
Conjugative transfer of the Lactococcus lactis chromosomal sex factor promotes dissemination of the Ll.LtrB group II intronQ40946449
Integrative gene cloning and expression system for Streptomyces sp. US 24 and Streptomyces sp. TN 58 bioactive molecule producing strains.Q41306035
Identification of the origin of transfer (oriT) and a new gene required for mobilization of the SXT/R391 family of integrating conjugative elementsQ41340424
Structure, diversity, and mobility of the Salmonella pathogenicity island 7 family of integrative and conjugative elements within EnterobacteriaceaeQ41420271
ICEEc2, a new integrative and conjugative element belonging to the pKLC102/PAGI-2 family, identified in Escherichia coli strain BEN374.Q41432926
Independent acquisition of site-specific recombination factors by asn tRNA gene-targeting genomic islandsQ41453705
A novel integrative and conjugative element (ICE) of Escherichia coli: the putative progenitor of the Yersinia high-pathogenicity islandQ41464046
Dynamics of the SetCD-regulated integration and excision of genomic islands mobilized by integrating conjugative elements of the SXT/R391 familyQ41584437
The conjugative transposon Tn5397 has a strong preference for integration into its Clostridium difficile target siteQ41668794
Roles of two large serine recombinases in mobilizing the methicillin-resistance cassette SCCmecQ41816424
Integrative conjugative elements and related elements are major contributors to the genome diversity of Streptococcus agalactiae.Q41868819
Autonomous plasmid-like replication of a conjugative transposonQ41899135
Heterologous expression of novobiocin and clorobiocin biosynthetic gene clustersQ41932715
Evolution of conjugation and type IV secretion systemsQ41992246
Determinants of entry exclusion within Eex and TraG are cytoplasmicQ42057223
Identification of a novel transposon (Tn6072) and a truncated staphylococcal cassette chromosome mec element in methicillin-resistant Staphylococcus aureus ST239.Q42111323
Identification of a novel variant of staphylococcal cassette chromosome mec, type II.5, and Its truncated form by insertion of putative conjugative transposon Tn6012.Q42111652
Novel mobile variants of staphylococcal cassette chromosome mec in Staphylococcus aureusQ42112430
Conjugative transfer of the integrative conjugative elements ICESt1 and ICESt3 from Streptococcus thermophilusQ42144435
XerCD-Mediated Site-Specific Recombination Leads to Loss of the 57-Kilobase Gonococcal Genetic IslandQ42165046
Identification and characterization of the immunity repressor (ImmR) that controls the mobile genetic element ICEBs1 of Bacillus subtilisQ42284018
Insertion sequence evolutionary patterns highlight convergent genetic inactivations and recent genomic island acquisitions among epidemic Burkholderia cenocepaciaQ42619236
Characterization of transposon Tn1549, conferring VanB-type resistance in Enterococcus spp.Q42627595
IS1294, a DNA element that transposes by RC transpositionQ42628926
Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.Q42645426
Circularization of Tn916 is required for expression of the transposon-encoded transfer functions: characterization of long tetracycline-inducible transcripts reading through the attachment siteQ42677860
Modulation of virulence within a pathogenicity island in vancomycin-resistant Enterococcus faecalisQ42678341
The ICESt1 element of Streptococcus thermophilus belongs to a large family of integrative and conjugative elements that exchange modules and change their specificity of integrationQ42685814
Genetic profile of pNOB8 from Sulfolobus: the first conjugative plasmid from an archaeonQ42686824
Two novel conjugative plasmids from a single strain of SulfolobusQ42689642
Conjugal plasmid transfer in Streptomyces resembles bacterial chromosome segregation by FtsK/SpoIIIEQ42762762
ZouA, a putative relaxase, is essential for dna amplification in Streptomyces kanamyceticusQ42792762
The SXT/R391 family of integrative conjugative elements is composed of two exclusion groupsQ42845397
A probabilistic model of local sequence alignment that simplifies statistical significance estimationQ21092573
The genome of the versatile nitrogen fixer Azorhizobium caulinodans ORS571Q21093358
Characterization of a new SCCmec element in Staphylococcus cohniiQ21136049
Horizontal transfer, not duplication, drives the expansion of protein families in prokaryotesQ22065251
Whole-Genome Sequencing of Staphylococcus haemolyticus Uncovers the Extreme Plasticity of Its Genome and the Evolution of Human-Colonizing Staphylococcal SpeciesQ22065446
Role of Mobile DNA in the Evolution of Vancomycin-Resistant Enterococcus faecalisQ22065825
A Genomic View of the Human-Bacteroides thetaiotaomicron SymbiosisQ22065827
Determination of the genome sequence of Porphyromonas gingivalis strain ATCC 33277 and genomic comparison with strain W83 revealed extensive genome rearrangements in P. gingivalisQ22066058
Complete Genomic Sequence of Nitrogen-fixing Symbiotic Bacterium Bradyrhizobium japonicum USDA110Q22066066
Lateral gene transfer and the nature of bacterial innovationQ22122396
Gapped BLAST and PSI-BLAST: a new generation of protein database search programsQ24545170
Behavior of restriction-modification systems as selfish mobile elements and their impact on genome evolutionQ24555229
Ecological genomics of marine picocyanobacteriaQ24644523
Dynamics of Pseudomonas aeruginosa genome evolutionQ24652525
A multicopy plasmid of the extremely thermophilic archaeon Sulfolobus effects its transfer to recipients by matingQ24671302
A genomic island present along the bacterial chromosome of the Parachlamydiaceae UWE25, an obligate amoebal endosymbiont, encodes a potentially functional F-like conjugative DNA transfer systemQ24799946
Pirates of the CaudoviralesQ26862538
Characterization of the Staphylococcus aureus rRNA Methyltransferase Encoded by orfX, the Gene Containing the Staphylococcal Chromosome Cassette mec (SCCmec) Insertion SiteQ27675120
Profile hidden Markov modelsQ27860536
Rapid evolution of virulence and drug resistance in the emerging zoonotic pathogen Streptococcus suisQ28475752
Integration and excision by the large serine recombinase phiRv1 integraseQ28487617
Regulation of a Bacillus subtilis mobile genetic element by intercellular signaling and the global DNA damage responseQ28769513
The SOS response controls integron recombination.Q29346620
Prevalence of SOS-mediated control of integron integrase expression as an adaptive trait of chromosomal and mobile integrons.Q29346731
Complete genome sequence of the model actinomycete Streptomyces coelicolor A3(2)Q29547307
Accelerated Profile HMM SearchesQ29547576
RNA-guided genetic silencing systems in bacteria and archaeaQ29614421
Modular evolution of TnGBSs, a new family of integrative and conjugative elements associating insertion sequence transposition, plasmid replication, and conjugation for their spreadingQ30593485
ICEA of Mycoplasma agalactiae: a new family of self-transmissible integrative elements that confers conjugative properties to the recipient strainQ30657431
The biphenyl- and 4-chlorobiphenyl-catabolic transposon Tn4371, a member of a new family of genomic islands related to IncP and Ti plasmids.Q30816609
Control of SXT integration and excisionQ30818840
A 90-kilobase conjugative chromosomal element coding for biphenyl and salicylate catabolism in Pseudomonas putida KF715Q30846631
Novel Tn4371-ICE like element in Ralstonia pickettii and genome mining for comparative elementsQ30920788
Staphylococcal cassette chromosome mec (SCCmec) typing of methicillin-resistant Staphylococcus aureus strains isolated in 11 Asian countries: a proposal for a new nomenclature for SCCmec elementsQ33234536
Control of phage Bxb1 excision by a novel recombination directionality factorQ33244373
Contribution of exogenous genetic elements to the group A Streptococcus metagenomeQ33295386
The complete genome sequence of Yersinia pseudotuberculosis IP31758, the causative agent of Far East scarlet-like feverQ33296886
Klebsiella pneumoniae multiresistance plasmid pMET1: similarity with the Yersinia pestis plasmid pCRY and integrative conjugative elementsQ33324383
The missing link: Bordetella petrii is endowed with both the metabolic versatility of environmental bacteria and virulence traits of pathogenic BordetellaeQ33372924
Atypical association of DDE transposition with conjugation specifies a new family of mobile elements.Q33404415
Genome evolution driven by host adaptations results in a more virulent and antimicrobial-resistant Streptococcus pneumoniae serotype 14Q33429266
The defective prophage pool of Escherichia coli O157: prophage-prophage interactions potentiate horizontal transfer of virulence determinantsQ33438408
Genomic island excisions in Bordetella petriiQ33483715
Integrative and sequence characteristics of a novel genetic element, ICE6013, in Staphylococcus aureusQ33489278
Analysis of the mobilization functions of the vancomycin resistance transposon Tn1549, a member of a new family of conjugative elementsQ33517437
Mobile antibiotic resistance encoding elements promote their own diversityQ33519503
Comparative ICE genomics: insights into the evolution of the SXT/R391 family of ICEsQ33521306
Evolution in quantum leaps: multiple combinatorial transfers of HPI and other genetic modules in EnterobacteriaceaeQ33525055
High-throughput genome sequencing of two Listeria monocytogenes clinical isolates during a large foodborne outbreakQ33532309
Characterization of a Bacteroides mobilizable transposon, NBU2, which carries a functional lincomycin resistance geneQ33603130
Whole genome analysis of a livestock-associated methicillin-resistant Staphylococcus aureus ST398 isolate from a case of human endocarditisQ33603634
Tight Regulation of the intS Gene of the KplE1 Prophage: A New Paradigm for Integrase Gene RegulationQ33719522
Genetic and structural analysis of the Bacteroides conjugative transposon CTn341.Q33726833
Conjugative DNA transfer induces the bacterial SOS response and promotes antibiotic resistance development through integron activation.Q33727996
The Salmonella genomic island 1 is specifically mobilized in trans by the IncA/C multidrug resistance plasmid familyQ33781122
Complete genome sequence of a serotype 11A, ST62 Streptococcus pneumoniae invasive isolateQ33809948
Retrotransfer or gene capture: a feature of conjugative plasmids, with ecological and evolutionary significanceQ33812337
Lateral gene transfer of streptococcal ICE element RD2 (region of difference 2) encoding secreted proteinsQ33860454
Functional characterization of an alkaline exonuclease and single strand annealing protein from the SXT genetic element of Vibrio choleraeQ33875807
Avoiding self: two Tn7-encoded proteins mediate target immunity in Tn7 transpositionQ33887753
Intra- and interspecies genomic transfer of the Enterococcus faecalis pathogenicity island.Q33894601
A cryptic 65-kilobase-pair transposonlike element isolated from Bacteroides uniformis has homology with Bacteroides conjugal tetracycline resistance elementsQ36159625
The biology of restriction and anti-restrictionQ36175695
Tn4399, a conjugal mobilizing transposon of Bacteroides fragilisQ36179389
Mobile genetic elements: the agents of open source evolutionQ36247081
The region of a Bacteroides conjugal chromosomal tetracycline resistance element which is responsible for production of plasmidlike forms from unlinked chromosomal DNA might also be involved in transfer of the elementQ36254645
Molecular and epidemiological evidence for spread of multiresistant methicillin-susceptible Staphylococcus aureus strains in hospitalsQ36313176
The current ICE age: biology and evolution of SXT-related integrating conjugative elements.Q36418823
Characterization of integrative and conjugative element ICEKp1-associated genomic heterogeneity in a Klebsiella pneumoniae strain isolated from a primary liver abscessQ36422212
Sequence and functional analyses of Haemophilus spp. genomic islandsQ36482003
Mechanisms of site-specific recombination.Q36498339
Genome characterization and population genetic structure of the zoonotic pathogen, Streptococcus canisQ36521441
Secondary chromosomal attachment site and tandem integration of the mobilizable Salmonella genomic island 1.Q36544392
Comparative analysis of mobilizable genomic islandsQ36559349
Conjugative transfer and cis-mobilization of a genomic island by an integrative and conjugative element of Streptococcus agalactiaeQ36667414
A genomic islet mediates flagellar phase variation in Escherichia coli strains carrying the flagellin-specifying locus flk.Q36747391
Bacterial group II introns: not just splicingQ36765046
Modular networks and cumulative impact of lateral transfer in prokaryote genome evolutionQ36775488
The Whole-genome sequencing of the obligate intracellular bacterium Orientia tsutsugamushi revealed massive gene amplification during reductive genome evolutionQ36955974
Tn7 elements: engendering diversity from chromosomes to episomes.Q37037496
Novel staphylococcal cassette chromosome mec type, tentatively designated type VIII, harboring class A mec and type 4 ccr gene complexes in a Canadian epidemic strain of methicillin-resistant Staphylococcus aureusQ37071999
Plasmid capture by the Bacillus thuringiensis conjugative plasmid pXO16.Q37127797
Actinomycete integrative and conjugative elementsQ37181824
Genomic islands: tools of bacterial horizontal gene transfer and evolutionQ37248338
Revised nomenclature for transposable genetic elementsQ37263470
tISCpe8, an IS1595-family lincomycin resistance element located on a conjugative plasmid in Clostridium perfringens.Q37365239
Alternative interactions between the Tn7 transposase and the Tn7 target DNA binding protein regulate target immunity and transpositionQ37367632
Comparative genomics reveal the mechanism of the parallel evolution of O157 and non-O157 enterohemorrhagic Escherichia coliQ37394514
Genetic structure and distribution of the colibactin genomic island among members of the family Enterobacteriaceae.Q37410263
Classification of staphylococcal cassette chromosome mec (SCCmec): guidelines for reporting novel SCCmec elementsQ37450667
A modular master on the move: the Tn916 family of mobile genetic elements.Q37493047
Replication and conjugative mobilization of broad host-range IncQ plasmidsQ37493631
Challenging a paradigm: the role of DNA homology in tyrosine recombinase reactions.Q37504513
Transferable antibiotic resistance elements in Haemophilus influenzae share a common evolutionary origin with a diverse family of syntenic genomic islandsQ37623029
ICESluvan, a 94-kilobase mosaic integrative conjugative element conferring interspecies transfer of VanB-type glycopeptide resistance, a novel bacitracin resistance locus, and a toxin-antitoxin stabilization system.Q42872099
Nucleotide sequence and functional analysis of the tet (M)-carrying conjugative transposon Tn5251 of Streptococcus pneumoniae.Q43058521
Genomic and functional analysis of ICEPdaSpa1, a fish-pathogen-derived SXT-related integrating conjugative element that can mobilize a virulence plasmid.Q43184083
Analysis of a Bacteroides conjugative transposon using a novel "targeted capture" model systemQ43727479
Analysis of the transcriptome of Legionella pneumophila hfq mutant reveals a new mobile genetic element.Q44148902
Two novel arginine catabolic mobile elements and staphylococcal chromosome cassette mec composite islands in community-acquired methicillin-resistant Staphylococcus aureus genotypes ST5-MRSA-V and ST5-MRSA-II.Q44244004
Transposon Tn7. cis-Acting sequences in transposition and transposition immunityQ44700800
Properties of polylysogens containing derepressed lambdaN- prophages. 3. A large number of intergrated lambda prophagesQ44789526
Dichotomy in the evolution of pathogenicity island and bacteriophage encoded integrases from pathogenic Escherichia coli strains.Q45085384
Sphingobacterium sp. strain PM2-P1-29 harbours a functional tet(X) gene encoding for the degradation of tetracyclineQ46136624
Initiation and termination of DNA transfer at F plasmid oriT.Q46346774
The highly dynamic CRISPR1 system of Streptococcus agalactiae controls the diversity of its mobilome.Q46482246
In vitro reconstitution of a single-stranded transposition mechanism of IS608.Q46749573
Genomic islands are dynamic, ancient integrative elements in bacterial evolution.Q47623825
Transposition of Tn4451 and Tn4453 involves a circular intermediate that forms a promoter for the large resolvase, TnpX.Q47816165
Monitoring genome evolution ex vivo: reversible chromosomal integration of a 106 kb plasmid at two tRNA(Lys) gene loci in sequential Pseudomonas aeruginosa airway isolates.Q47824292
Analysis of sequences flanking the vap regions of Dichelobacter nodosus: evidence for multiple integration events, a killer system, and a new genetic elementQ48054553
A group II intron in a conjugative transposon from the gram-positive bacterium, Clostridium difficileQ48059925
Identification and characterization of a new conjugation/type IVA secretion system (trb/tra) of Legionella pneumophila Corby localized on two mobile genomic islandsQ48077439
Mode and origin of replication of pSAM2, a conjugative integrating element of Streptomyces ambofaciens.Q48095787
Complete and variant forms of the 'gonococcal genetic island' in Neisseria meningitidis.Q48108998
Neisseria gonorrhoeae secretes chromosomal DNA via a novel type IV secretion systemQ48147768
Evolution of genomic islands by deletion and tandem accretion by site-specific recombination: ICESt1-related elements from Streptococcus thermophilusQ48195856
Conjugal immunity of Streptomyces strains carrying the integrative element pSAM2 is due to the pif gene (pSAM2 immunity factor).Q48258190
The integrative element pSAM2 from Streptomyces: kinetics and mode of conjugal transferQ48336440
The Salmonella genomic island 1 is an integrative mobilizable element.Q50092650
Shuttle transfer (or retrotransfer) of chromosomal markers mediated by plasmid pULB113.Q50200850
The new IS1595 family, its relation to IS1 and the frontier between insertion sequences and transposons.Q51848539
Development of an integrative vector for the expression of antisense RNA in Clostridium difficile.Q53852733
Growth-phase-dependent mobility of the lvh-encoding region in Legionella pneumophila strain Paris.Q54568001
Plasmids from freshwater environments capable of IncQ retrotransfer are diverse and include pQKH54, a new IncP-1 subgroup archetype.Q54584426
Retrotransfer of IncP plasmid R751 from Escherichia coli maxicells: evidence for the genetic sufficiency of self-transferable plasmids for bacterial conjugation.Q54650772
Intracellular excision and reintegration dynamics of the ICEclc genomic island of Pseudomonas knackmussii sp. strain B13Q56893600
Tn4451 from Clostridium perfringens is a mobilizable transposon that encodes the functional Mob protein, TnpZQ58029354
Heterogeneity of Tn5253-like composite elements in clinical Streptococcus pneumoniae isolatesQ34737570
The arginine catabolic mobile element and staphylococcal chromosomal cassette mec linkage: convergence of virulence and resistance in the USA300 clone of methicillin-resistant Staphylococcus aureusQ34808060
Selective pressures to maintain attachment site specificity of integrative and conjugative elementsQ34845772
Two distinct genetic elements are responsible for erm(TR)-mediated erythromycin resistance in tetracycline-susceptible and tetracycline-resistant strains of Streptococcus pyogenesQ34933219
Conjugative transposons: the tip of the iceberg.Q34985996
When phage, plasmids, and transposons collide: genomic islands, and conjugative- and mobilizable-transposons as a mosaic continuumQ35013459
The clostridial mobilisable transposonsQ35060037
Insights on antibiotic resistance of Staphylococcus aureus from its whole genome: genomic island SCC.Q35091151
Antibiotic resistance conferred by a class I integron and SXT constin in Vibrio cholerae O1 strains isolated in LaosQ35124484
Detection of staphylococcal cassette chromosome mec type XI carrying highly divergent mecA, mecI, mecR1, blaZ, and ccr genes in human clinical isolates of clonal complex 130 methicillin-resistant Staphylococcus aureusQ35139513
The Gonococcal Genetic Island and Type IV Secretion in the Pathogenic NeisseriaQ35155296
Genomic islands and the evolution of catabolic pathways in bacteriaQ35172595
What traits are carried on mobile genetic elements, and why?Q35246646
Interstrain transfer of the large pathogenicity island (PAPI-1) of Pseudomonas aeruginosaQ35544327
Requirements for strand- and site-specific cleavage within the oriT region of Tn4399, a mobilizing transposon from Bacteroides fragilisQ35587030
The mobilization regions of two integrated Bacteroides elements, NBU1 and NBU2, have only a single mobilization protein and may be on a cassetteQ35589859
A new type of conjugative transposon encodes resistance to sulfamethoxazole, trimethoprim, and streptomycin in Vibrio cholerae O139.Q35609627
Tn7 transposition as a probe of cis interactions between widely separated (190 kilobases apart) DNA sites in the Escherichia coli chromosomeQ35615633
CTnscr94, a conjugative transposon found in enterobacteriaQ35621277
Spontaneous staphylococcal cassette chromosome mec element excision in Staphylococcus aureus nasal carriersQ35689101
Genomic islands in pathogenic and environmental microorganismsQ35752419
Transposon Tn7 is widespread in diverse bacteria and forms genomic islands.Q35759494
Complete genome sequence of the prototype lactic acid bacterium Lactococcus lactis subsp. cremoris MG1363.Q35759658
Characterization of a small mobilizable transposon, MTnSag1, in Streptococcus agalactiaeQ35879324
Prevalence and detailed mapping of the gonococcal genetic island in Neisseria meningitidisQ35942819
Retrotransfer in Escherichia coli conjugation: bidirectional exchange or de novo mating?Q35966743
Unexpected effect of a Bacteroides conjugative transposon, CTnDOT, on chromosomal gene expression in its bacterial hostQ35990796
Lateral gene transfer between obligate intracellular bacteria: evidence from the Rickettsia massiliae genomeQ36098291
Nucleotide sequence analysis of the termini and chromosomal locus involved in site-specific integration of the streptococcal conjugative transposon Tn5252.Q36099736
Characterization of the novel nisin-sucrose conjugative transposon Tn5276 and its insertion in Lactococcus lactisQ36118343
Characterization of a "mobilization cassette" in transposon Tn4399 from Bacteroides fragilisQ36122099
Excision, transfer, and integration of NBU1, a mobilizable site-selective insertion elementQ36123078
Characterization of the mobilization region of a Bacteroides insertion element (NBU1) that is excised and transferred by Bacteroides conjugative transposonsQ36123086
Towards a more accurate annotation of tyrosine-based site-specific recombinases in bacterial genomesQ36150447
Conjugative DNA metabolism in Gram-negative bacteriaQ37634129
Novel non-mecA-containing staphylococcal chromosomal cassette composite island containing pbp4 and tagF genes in a commensal staphylococcal species: a possible reservoir for antibiotic resistance islands in Staphylococcus aureusQ37734157
Integrative and conjugative elements: mosaic mobile genetic elements enabling dynamic lateral gene flow.Q37770056
Integrons.Q37779789
Mobility of plasmids.Q37784107
Lateral genetic transfer and the construction of genetic exchange communitiesQ37827559
Tn916-like genetic elements: a diverse group of modular mobile elements conferring antibiotic resistanceQ37887044
Combinatorial events of insertion sequences and ICE in Gram-negative bacteriaQ37897646
Integrative mobile elements exploiting Xer recombinationQ38057830
A phage protein that binds φC31 integrase to switch its directionalityQ38427999
Mobilization of the incQ plasmid R300B with a chromosomal conjugation system in Salmonella enterica serovar typhiQ38609060
Structural comparison of three types of staphylococcal cassette chromosome mec integrated in the chromosome in methicillin-resistant Staphylococcus aureusQ39477045
Conjugative transposons and the dissemination of antibiotic resistance in streptococciQ39505566
Site-specific recombination with the chromosomal tRNA(Leu) gene by the large conjugative Haemophilus resistance plasmidQ39651812
Isolation and characterization of cLV25, a Bacteroides fragilis chromosomal transfer factor resembling multiple Bacteroides sp. mobilizable transposonsQ39678677
Genomic and functional analyses of SXT, an integrating antibiotic resistance gene transfer element derived from Vibrio choleraeQ39679833
SGI2, a relative of Salmonella genomic island SGI1 with an independent origin.Q39687304
Differential regulation of two closely related integrative and conjugative elements from Streptococcus thermophilus.Q39693385
The streptomyces genome contains multiple pseudo-attB sites for the (phi)C31-encoded site-specific recombination systemQ39694905
NikAB- or NikB-dependent intracellular recombination between tandemly repeated oriT sequences of plasmid R64 in plasmid or single-stranded phage vectorsQ39775222
Regulation, integrase-dependent excision, and horizontal transfer of genomic islands in Legionella pneumophilaQ39797873
DNA-damaging agents induce the RecA-independent homologous recombination functions of integrating conjugative elements of the SXT/R391 familyQ39799457
Mechanism of retrotransfer in conjugation: prior transfer of the conjugative plasmid is requiredQ39840515
Homing of a group II intron from Lactococcus lactis subsp. lactis ML3.Q39847386
Composition, acquisition, and distribution of the Vi exopolysaccharide-encoding Salmonella enterica pathogenicity island SPI-7.Q39853025
Identification of a catabolic transposon, Tn4371, carrying biphenyl and 4-chlorobiphenyl degradation genes in Alcaligenes eutrophus A5.Q39925494
Identification of a circular intermediate in the transfer and transposition of Tn4555, a mobilizable transposon from Bacteroides spp.Q39928223
Conjugation-independent, site-specific recombination at the oriT of the IncW plasmid R388 mediated by TrwC.Q39932074
The presence of conjugative transposon Tn916 in the recipient strain does not impede transfer of a second copy of the elementQ39938842
Tn5253, the pneumococcal omega (cat tet) BM6001 element, is a composite structure of two conjugative transposons, Tn5251 and Tn5252.Q39939314
Identification of Tn4451 and Tn4452, chloramphenicol resistance transposons from Clostridium perfringensQ39956349
Identification of a new insertion element, similar to gram-negative IS26, on the lactose plasmid of Streptococcus lactis ML3.Q39963100
Horizontally acquired genomic islands in the tubercle bacilliQ40085600
Pathogenicity islands and the evolution of microbesQ33920183
Site-specific mobilization of vinyl chloride respiration islands by a mechanism common in DehalococcoidesQ33920363
Molecular analysis of antibiotic resistance gene clusters in vibrio cholerae O139 and O1 SXT constins.Q33983266
Roles of CcrA and CcrB in excision and integration of staphylococcal cassette chromosome mec, a Staphylococcus aureus genomic islandQ33983355
Characterization of a novel integrative element, ICESt1, in the lactic acid bacterium Streptococcus thermophilusQ33987062
Evidence for extensive resistance gene transfer among Bacteroides spp. and among Bacteroides and other genera in the human colonQ33988772
Characterization of the 13-kilobase ermF region of the Bacteroides conjugative transposon CTnDOT.Q33990026
Characterization of the ends and target sites of the novel conjugative transposon Tn5397 from Clostridium difficile: excision and circularization is mediated by the large resolvase, TndX.Q33994284
Integration and excision of a Bacteroides conjugative transposon, CTnDOT.Q33994404
Formation of chromosomal tandem arrays of the SXT element and R391, two conjugative chromosomally integrating elements that share an attachment siteQ33995532
Complete nucleotide sequence of a 43-kilobase genomic island associated with the multidrug resistance region of Salmonella enterica serovar Typhimurium DT104 and its identification in phage type DT120 and serovar AgonaQ33996939
Conserved target for group II intron insertion in relaxase genes of conjugative elements of gram-positive bacteriaQ33999519
The repertoire of ICE in prokaryotes underscores the unity, diversity, and ubiquity of conjugationQ34005318
Genetic organisation, mobility and predicted functions of genes on integrated, mobile genetic elements in sequenced strains of Clostridium difficile.Q34005408
Bacteriophage genes that inactivate the CRISPR/Cas bacterial immune system.Q34034778
Genome organization of epidemic Acinetobacter baumannii strainsQ34045074
Uncovering the prevalence and diversity of integrating conjugative elements in actinobacteriaQ34082912
Widespread distribution of a tet W determinant among tetracycline-resistant isolates of the animal pathogen Arcanobacterium pyogenesQ34107303
The IncP island in the genome of Brucella suis 1330 was acquired by site-specific integration.Q34111611
Site-specific recombinase and integrase activities of a conjugative relaxase in recipient cellsQ34132259
Bacterial plasmid partition machinery: a minimalist approach to survivalQ34239273
Ecological fitness, genomic islands and bacterial pathogenicity. A Darwinian view of the evolution of microbesQ34263261
Phage integrases: biology and applicationsQ34285284
SOS response promotes horizontal dissemination of antibiotic resistance genesQ34285480
What makes the bacteriophage lambda Red system useful for genetic engineering: molecular mechanism and biological functionQ34303620
Comparative sequence analysis of the symbiosis island of Mesorhizobium loti strain R7A.Q34312033
Amplification of the tetracycline resistance determinant of pAMalpha1 in Enterococcus faecalis requires a site-specific recombination event involving relaxaseQ34318344
Molecular genetic analysis of ICEF, an integrative conjugal element that is present as a repetitive sequence in the chromosome of Mycoplasma fermentans PG18.Q34321205
Analysis of a Clostridium difficile PCR ribotype 078 100 kilobase island reveals the presence of a novel transposon, Tn6164Q34322185
Shaping bacterial genomes with integrative and conjugative elementsQ34327965
Horizontal gene transfer, genome innovation and evolutionQ34447824
Characterization of a new CAMP factor carried by an integrative and conjugative element in Streptococcus agalactiae and spreading in StreptococciQ34477545
Mobile elements as a combination of functional modules.Q34499476
Genomic islands and the ecology and evolution of Prochlorococcus.Q34504656
The clc element of Pseudomonas sp. strain B13, a genomic island with various catabolic propertiesQ34509988
The CRISPRs, they are a-changin': how prokaryotes generate adaptive immunityQ34645309
A new integrative conjugative element occurs in Mycoplasma agalactiae as chromosomal and free circular formsQ34697053
P433issue4
P407language of work or nameEnglishQ1860
P921main subjectbacterial evolutionQ115395667
P304page(s)720-760
P577publication date2014-01-27
P1433published inFEMS Microbiology ReviewsQ15762226
P1476titleConjugative and mobilizable genomic islands in bacteria: evolution and diversity
P478volume38

Reverse relations

cites work (P2860)
Q46255535A DNA segment encoding the anticodon stem/loop of tRNA determines the specific recombination of integrative-conjugative elements in Acidithiobacillus species
Q37710403A Glimpse into the World of Integrative and Mobilizable Elements in Streptococci Reveals an Unexpected Diversity and Novel Families of Mobilization Proteins.
Q89995978A Yersinia ruckeri TIR Domain-Containing Protein (STIR-2) Mediates Immune Evasion by Targeting the MyD88 Adaptor
Q90694089A novel system of bacterial cell division arrest implicated in horizontal transmission of an integrative and conjugative element
Q35793792Adaptation in Toxic Environments: Arsenic Genomic Islands in the Bacterial Genus Thiomonas
Q51275252Aeromonas salmonicida subsp. salmonicida strains isolated from Chinese freshwater fish contain a novel genomic island and possible regional-specific mobile genetic elements profiles.
Q58697017An ancient family of mobile genomic islands introducing cephalosporinase and carbapenemase genes in Enterobacteriaceae
Q40896411An operon of three transcriptional regulators controls horizontal gene transfer of the integrative and conjugative element ICEclc in Pseudomonas knackmussii B13
Q41363416Analysis of Streptococcus agalactiae pan-genome for prevalence, diversity and functionality of integrative and conjugative or mobilizable elements integrated in the tRNA(Lys CTT) gene
Q47769087Analysis of multiple haloarchaeal genomes suggests that the quinone-dependent respiratory nitric oxide reductase is an important source of nitrous oxide in hypersaline environments.
Q35883819Antibiotic Susceptibility Profiles of Dairy Leuconostoc, Analysis of the Genetic Basis of Atypical Resistances and Transfer of Genes In Vitro and in a Food Matrix
Q38608936Biological action in Read-Write genome evolution
Q64082357Biological and Structural Diversity of Type IV Secretion Systems
Q92351056Biphenyl/PCB Degrading bph Genes of Ten Bacterial Strains Isolated from Biphenyl-Contaminated Soil in Kitakyushu, Japan: Comparative and Dynamic Features as Integrative Conjugative Elements (ICEs)
Q39675245CRISPR-Cas Defense System and Potential Prophages in Cyanobacteria Associated with the Coral Black Band Disease
Q60043978Carbapenemases on the move: it’s good to be on ICEs
Q53789771Characterization of a genomic island harbouring a new vanD allele from Enterococcus faecium N15-508 isolated in Canada.
Q64068786Characterization of a relaxase belonging to the MOB family, a widespread family in Firmicutes mediating the transfer of ICEs
Q92282538Chromosomal Conjugative and Mobilizable Elements in Streptococcus suis: Major Actors in the Spreading of Antimicrobial Resistance and Bacteriocin Synthesis Genes
Q34611833Chromosomal transfers in mycoplasmas: when minimal genomes go mobile.
Q35328032Classification of prokaryotic genetic replicators: between selfishness and altruism
Q54231444ClustAGE: a tool for clustering and distribution analysis of bacterial accessory genomic elements.
Q92564790Comparative Genomics of Marine Sponge-Derived Streptomyces spp. Isolates SM17 and SM18 With Their Closest Terrestrial Relatives Provides Novel Insights Into Environmental Niche Adaptations and Secondary Metabolite Biosynthesis Potential
Q58546778Comparative genomics of the Komagataeibacter strains-Efficient bionanocellulose producers
Q91917473Comprehensive analysis of chromosomal mobile genetic elements in the gut microbiome reveals phylum-level niche-adaptive gene pools
Q26746938Computational methods for predicting genomic islands in microbial genomes
Q49408141Crosstalk between vertical and horizontal gene transfer: plasmid replication control by a conjugative relaxase
Q98882004Deciphering the mobility and bacterial hosts of antibiotic resistance genes under antibiotic selection pressure by metagenomic assembly and binning approaches
Q92881299Destabilization of the Tumor-Inducing Plasmid from an Octopine-Type Agrobacterium tumefaciens Lineage Drives a Large Deletion in the Co-resident At Megaplasmid
Q36644791Diversity and Evolution of the Tn5801-tet(M)-Like Integrative and Conjugative Elements among Enterococcus, Streptococcus, and Staphylococcus
Q46378972Diversity of Integrative and Conjugative Elements of Streptococcus salivarius and Their Intra- and Interspecies Transfer
Q37318052Evolution and Diversity of the Antimicrobial Resistance Associated Mobilome in Streptococcus suis: A Probable Mobile Genetic Elements Reservoir for Other Streptococci
Q46616134First identification of Tn916-like element in industrial strains of Lactobacillus vini that spread the tet-M resistance gene
Q57091716Genome Variation in the Model Halophilic Bacterium
Q38629272Genomic insights into the pathogenicity and environmental adaptability of Enterococcus hirae R17 isolated from pork offered for retail sale.
Q37739134Genomics Reveals a Unique Clone of Burkholderia cenocepacia Harboring an Actively Excising Novel Genomic Island.
Q38808071Genomics and the evolution of antibiotic resistance
Q37021832Highly variable individual donor cell fates characterize robust horizontal gene transfer of an integrative and conjugative element.
Q57618365Host range and genetic plasticity explain the co-existence of integrative and extrachromosomal mobile genetic elements
Q37023286ICESpy009, a Conjugative Genetic Element Carrying mef(E) in Streptococcus pyogenes
Q58587046ICEberg 2.0: an updated database of bacterial integrative and conjugative elements
Q90681057IS26-Mediated Genetic Rearrangements in Salmonella Genomic Island 1 of Proteus mirabilis
Q64056596Identification and Characterization of and Two Mobilization Genes Required for Conjugative Transfer of Genomic Island 1
Q36324439Identification and analysis of genomic islands in Burkholderia cenocepacia AU 1054 with emphasis on pathogenicity islands.
Q41740772Identification and comparative analysis of a genomic island in Mycobacterium avium subsp. hominissuis
Q64081527Identification of Three Types of Integrative and Conjugative Elements in Elizabethkingia anophelis Strains Isolated from around the World
Q61445482Impact of Homologous Recombination on the Evolution of Prokaryotic Core Genomes
Q47287400Impact of cell surface molecules on conjugative transfer of the integrative and conjugative element ICESt3 of Streptococcus thermophilus.
Q30390741IncA/C Conjugative Plasmids Mobilize a New Family of Multidrug Resistance Islands in Clinical Vibrio cholerae Non-O1/Non-O139 Isolates from Haiti
Q37529766Integrative and Conjugative Elements (ICEs): What They Do and How They Work
Q41626922Integrative and conjugative elements and their hosts: composition, distribution and organization
Q36279479Interactions between closely related bacterial strains are revealed by deep transcriptome sequencing
Q90566341Jump ahead with a twist: DNA acrobatics drive transposition forward
Q42216560Klebsiella pneumoniae Asparagine tDNAs Are Integration Hotspots for Different Genomic Islands Encoding Microcin E492 Production Determinants and Other Putative Virulence Factors Present in Hypervirulent Strains
Q40515882Lateral gene transfer, bacterial genome evolution, and the Anthropocene
Q46246927Living Organisms Author Their Read-Write Genomes in Evolution
Q40867197Macrolide resistance gene erm(TR) and erm(TR)-carrying genetic elements in Streptococcus agalactiae: characterization of ICESagTR7, a new composite element containing IMESp2907.
Q40582007Methods for Determining Transfer of Mobile Genetic Elements in Clostridium difficile
Q39394653Mobile genetic elements in Neisseria gonorrhoeae: movement for change
Q40229412Mobilizable genomic islands, different strategies for the dissemination of multidrug resistance and other adaptive traits.
Q36240751Networking in microbes: conjugative elements and plasmids in the genus Alteromonas
Q36432032New Insights into the Classification and Integration Specificity of Streptococcus Integrative Conjugative Elements through Extensive Genome Exploration
Q26315280Nothing in Evolution Makes Sense Except in the Light of Genomics: Read-Write Genome Evolution as an Active Biological Process
Q51592249Novel chromosome-encoded erm(47) determinant responsible for constitutive MLSB resistance in Helcococcus kunzii.
Q49270548Phylogeographic diversity and mosaicism of the Helicobacter pylori tfs integrative and conjugative elements
Q49964207PlasFlow: predicting plasmid sequences in metagenomic data using genome signatures
Q58558160Prebiotics for Lactose Intolerance: Variability in Galacto-Oligosaccharide Utilization by Intestinal
Q40690041Prediction of Putative Resistance Islands in a Carbapenem-Resistant Acinetobacter baumannii Global Clone 2 Clinical Isolate
Q100958583Rapid growth inhibitory activity of a YafQ-family endonuclease toxin of the Helicobacter pylori tfs4 integrative and conjugative element
Q40984979Recombination between Streptococcus suis ICESsu32457 and Streptococcus agalactiae ICESa2603 yields a hybrid ICE transferable to Streptococcus pyogenes
Q41344454Resistance Genes and Genetic Elements Associated with Antibiotic Resistance in Clinical and Commensal Isolates of Streptococcus salivarius
Q26745983SXT/R391 Integrative and Conjugative Elements (ICEs) Encode a Novel 'Trap-Door' Strategy for Mobile Element Escape
Q92823684Salmonella Genomic Island 3 Is an Integrative and Conjugative Element and Contributes to Copper and Arsenic Tolerance of Salmonella enterica
Q36326607Salmonella genomic island 1 (SGI1) reshapes the mating apparatus of IncC conjugative plasmids to promote self-propagation.
Q36834448Sequence-Based Characterization of Tn5801-Like Genomic Islands in Tetracycline-Resistant Staphylococcus pseudintermedius and Other Gram-positive Bacteria from Humans and Animals
Q41643481Streptococcal group B integrative and mobilizable element IMESag-rpsI encodes a functional relaxase involved in its transfer
Q40121665Structural basis of a histidine-DNA nicking/joining mechanism for gene transfer and promiscuous spread of antibiotic resistance
Q55404079Surfaceome and Proteosurfaceome in Parietal Monoderm Bacteria: Focus on Protein Cell-Surface Display.
Q47135186The Different Faces of Rolling-Circle Replication and Its Multifunctional Initiator Proteins
Q51621347The ICEXTD of Azoarcus sp. CIB, an integrative and conjugative element with aerobic and anaerobic catabolic properties.
Q40931336The Landscape of Realized Homologous Recombination in Pathogenic Bacteria.
Q47161626The Obscure World of Integrative and Mobilizable Elements, Highly Widespread Elements that Pirate Bacterial Conjugative Systems.
Q35215425The dnd operon for DNA phosphorothioation modification system in Escherichia coli is located in diverse genomic islands
Q38498279The dualistic nature of integrative and conjugative elements
Q26782828The extended regulatory networks of SXT/R391 integrative and conjugative elements and IncA/C conjugative plasmids
Q38859993The hidden life of integrative and conjugative elements
Q54963115The lactose operon from Lactobacillus casei is involved in the transport and metabolism of the human milk oligosaccharide core-2 N-acetyllactosamine.
Q35361457The master activator of IncA/C conjugative plasmids stimulates genomic islands and multidrug resistance dissemination
Q36098194Thiomonas sp. CB2 is able to degrade urea and promote toxic metal precipitation in acid mine drainage waters supplemented with urea
Q35768051Transcriptional Analysis of the Conjugal Transfer Genes of Rickettsia bellii RML 369-C.
Q99237772Type IV Coupling Proteins as Potential Targets to Control the Dissemination of Antibiotic Resistance
Q50065182Unravelling the genome of a Pseudomonas aeruginosa isolate belonging to the high-risk clone ST235 reveals an integrative conjugative element housing a blaGES-6 carbapenemase

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