O-GlcNAc profiling: from proteins to proteomes

scientific article published on 05 March 2014

O-GlcNAc profiling: from proteins to proteomes is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P6179Dimensions Publication ID1041359599
P356DOI10.1186/1559-0275-11-8
P932PMC publication ID4015695
P698PubMed publication ID24593906
P5875ResearchGate publication ID260523833

P2093author name stringGerald W Hart
Junfeng Ma
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Mapping sites of O-GlcNAc modification using affinity tags for serine and threonine post-translational modificationsQ28215287
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Localization of O-GlcNAc modification on the serum response transcription factorQ28259727
Quantitative proteomics using stable isotope labeling with amino acids in cell cultureQ28271745
Laser desorption ionization of proteins with molecular masses exceeding 10,000 daltonsQ28293769
A practical recipe for stable isotope labeling by amino acids in cell culture (SILAC)Q28296386
Cycling of O-linked beta-N-acetylglucosamine on nucleocytoplasmic proteinsQ28299550
Cytologic assessment of nuclear and cytoplasmic O-linked N-acetylglucosamine distribution by using anti-streptococcal monoclonal antibodiesQ28329475
Increased enzymatic O-GlcNAcylation of mitochondrial proteins impairs mitochondrial function in cardiac myocytes exposed to high glucoseQ28573520
Global identification and characterization of both O-GlcNAcylation and phosphorylation at the murine synapseQ28594444
Super-SILAC mix for quantitative proteomics of human tumor tissueQ39719028
O-GlcNAc modulation at Akt1 Ser473 correlates with apoptosis of murine pancreatic beta cellsQ39969650
Identification of new O-GlcNAc modified proteins using a click-chemistry-based taggingQ39998103
Proteomic analysis of O-GlcNAc modifications derived from streptozotocin and glucosamine induced beta-cell apoptosisQ40042717
Tagging-via-substrate strategy for probing O-GlcNAc modified proteins.Q40410441
Stable-isotope dimethyl labeling for quantitative proteomicsQ40608471
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O-linked N-acetylglucosamine proteomics of postsynaptic density preparations using lectin weak affinity chromatography and mass spectrometryQ42679419
Characterization of a mouse monoclonal antibody specific for O-linked N-acetylglucosamineQ43634630
Mapping O-GlcNAc modification sites on tau and generation of a site-specific O-GlcNAc tau antibodyQ43713127
Identification of GlcNAcylation sites of peptides and alpha-crystallin using Q-TOF mass spectrometryQ43769874
Identification of substituted sites on MUC5AC mucin motif peptides after enzymatic O-glycosylation combining beta-elimination and fixed-charge derivatizationQ43831385
Identification of Ewing's sarcoma gene product as a glycoprotein using a monoclonal antibody that recognizes an immunodeterminant containing O-linked N-acetylglucosamine moietyQ44112687
Mitochondrial and nucleocytoplasmic isoforms of O-linked GlcNAc transferase encoded by a single mammalian geneQ44264485
Identification of novel sites of O-N-acetylglucosamine modification of serum response factor using quadrupole time-of-flight mass spectrometry.Q44396316
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Quantitative analysis of both protein expression and serine / threonine post-translational modifications through stable isotope labeling with dithiothreitolQ45222216
Proteomic analysis and abrogated expression of O-GlcNAcylated proteins associated with primary breast cancer.Q45951647
Mapping of O-linked beta-N-acetylglucosamine modification sites in key contractile proteins of rat skeletal muscle.Q46074241
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SILAC mouse for quantitative proteomics uncovers kindlin-3 as an essential factor for red blood cell functionQ46458771
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Enzymatic addition of O-GlcNAc to nuclear and cytoplasmic proteins. Identification of a uridine diphospho-N-acetylglucosamine:peptide beta-N-acetylglucosaminyltransferaseQ46669689
Posttranslational modifications on protein kinase c isozymes. Effects of epinephrine and phorbol estersQ46737360
Global identification of O-GlcNAc-modified proteinsQ46891762
Multiplex peptide stable isotope dimethyl labeling for quantitative proteomics.Q51758332
Glycosylation of chromosomal proteins: localization of O-linked N-acetylglucosamine in Drosophila chromatin.Q52452782
The subcellular distribution of terminal N-acetylglucosamine moieties. Localization of a novel protein-saccharide linkage, O-linked GlcNAc.Q54426511
Purification and Identification ofO-GlcNAc-Modified Peptides Using Phosphate-Based Alkyne CLICK Chemistry in Combination with Titanium Dioxide Chromatography and Mass SpectrometryQ57279142
Simultaneous Detection and Identification of O-GlcNAc-Modified Glycoproteins Using Liquid Chromatography−Tandem Mass SpectrometryQ58055863
Selective Detection and Site-Analysis of O-GlcNAc-Modified Glycopeptides by β-Elimination and Tandem Electrospray Mass SpectrometryQ63361145
High-sensitivity FAB-MS strategies for O-GlcNAc characterizationQ67895365
Determination and location of phosphoserine in proteins and peptides by conversion to S-ethylcysteineQ68047824
Topography and polypeptide distribution of terminal N-acetylglucosamine residues on the surfaces of intact lymphocytes. Evidence for O-linked GlcNAcQ70466786
RNA polymerase II is a glycoprotein. Modification of the COOH-terminal domain by O-GlcNAcQ70695837
Specific isolation of O-linked N-acetylglucosamine glycopeptides from complex mixturesQ70927036
Identification of O-GlcNAc sites on proteinsQ79372176
Discovery of O-GlcNAc-modified proteins in published large-scale proteome dataQ28714168
Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagentsQ29547450
Electrospray ionization for mass spectrometry of large biomoleculesQ29618001
O-Linked β-N-acetylglucosamine (O-GlcNAc) regulates emerin binding to barrier to autointegration factor (BAF) in a chromatin- and lamin B-enriched "niche".Q30410148
Tandem mass spectrometry identifies many mouse brain O-GlcNAcylated proteins including EGF domain-specific O-GlcNAc transferase targetsQ30424053
O-GlcNAcylation of the Plum pox virus capsid protein catalyzed by SECRET AGENT: characterization of O-GlcNAc sites by electron transfer dissociation mass spectrometryQ30431005
Enrichment and site mapping of O-linked N-acetylglucosamine by a combination of chemical/enzymatic tagging, photochemical cleavage, and electron transfer dissociation mass spectrometryQ30433713
Extensive crosstalk between O-GlcNAcylation and phosphorylation regulates cytokinesisQ30436151
Regulation of calcium/calmodulin-dependent kinase IV by O-GlcNAc modification.Q30490721
Metabolic cross-talk allows labeling of O-linked beta-N-acetylglucosamine-modified proteins via the N-acetylgalactosamine salvage pathwayQ30498243
Dynamic interplay between O-linked N-acetylglucosaminylation and glycogen synthase kinase-3-dependent phosphorylationQ33284870
O-linked beta-N-acetylglucosamine (O-GlcNAc): Extensive crosstalk with phosphorylation to regulate signaling and transcription in response to nutrients and stressQ33625265
O-linked N-acetylglucosamine modification of insulin receptor substrate-1 occurs in close proximity to multiple SH2 domain binding motifsQ33628891
Activation of the transcriptional function of the NF-κB protein c-Rel by O-GlcNAc glycosylationQ33791683
Glycopeptide-specific monoclonal antibodies suggest new roles for O-GlcNAcQ33802435
Enrichment of O-GlcNAc modified proteins by the periodate oxidation-hydrazide resin capture approachQ33835452
Chemoselective attachment of small molecule effector functionality to human adenoviruses facilitates gene delivery to cancer cells.Q33862005
dbOGAP - an integrated bioinformatics resource for protein O-GlcNAcylation.Q33863321
A novel two-stage tandem mass spectrometry approach and scoring scheme for the identification of O-GlcNAc modified peptidesQ33864754
O-GlcNAc-specific antibody CTD110.6 cross-reacts with N-GlcNAc2-modified proteins induced under glucose deprivationQ33883510
Quantitative, high-resolution proteomics for data-driven systems biologyQ33891413
O-GlcNAc cycling enzymes associate with the translational machinery and modify core ribosomal proteinsQ33907013
Identification of glycosylation sites in mucin peptides by edman degradationQ33924275
Quantification of O-glycosylation stoichiometry and dynamics using resolvable mass tagsQ34075637
Prediction of glycosylation across the human proteome and the correlation to protein function.Q34121596
Mapping of O-GlcNAc sites of 20 S proteasome subunits and Hsp90 by a novel biotin-cystamine tag.Q34255802
Purification and characterization of an O-GlcNAc selective N-acetyl-beta-D-glucosaminidase from rat spleen cytosol.Q34330440
Beta-N-acetylglucosamine (O-GlcNAc) is part of the histone codeQ34359019
Characterization of O-GlcNAc cycling and proteomic identification of differentially O-GlcNAcylated proteins during G1/S transitionQ34411458
Glycomics Hits the Big TimeQ34432774
Probing the dynamics of O-GlcNAc glycosylation in the brain using quantitative proteomicsQ34627638
Higher-energy C-trap dissociation for peptide modification analysis.Q34667664
Protein microarrays: high-throughput tools for proteomicsQ34977186
Chemical reporters for fluorescent detection and identification of O-GlcNAc-modified proteins reveal glycosylation of the ubiquitin ligase NEDD4-1Q35002612
Two-dimensional gel electrophoresis in proteomics: Past, present and futureQ37777786
O-GlcNAc modification, insulin signaling and diabetic complications.Q37809205
Proteomic databases and tools to decipher post-translational modificationsQ37943686
Mass spectrometry-based proteomics and network biologyQ37996108
O-GlcNAc cycling: a link between metabolism and chronic diseaseQ38103951
O-GlcNAc in cancer biologyQ38120210
Protein O-GlcNAcylation in diabetes and diabetic complicationsQ38132916
Comparative analysis by frontal affinity chromatography of oligosaccharide specificity of GlcNAc-binding lectins, Griffonia simplicifolia lectin-II (GSL-II) and Boletopsis leucomelas lectin (BLL).Q38311586
Crystal structure of a wheat germ agglutinin/glycophorin-sialoglycopeptide receptor complex. Structural basis for cooperative lectin-cell bindingQ38327567
Bioaffinity chromatography in the 10 mM range of Kd.Q38341845
Combining high-energy C-trap dissociation and electron transfer dissociation for protein O-GlcNAc modification site assignmentQ38403960
Polycomb repressive complex 2 is necessary for the normal site-specific O-GlcNAc distribution in mouse embryonic stem cellsQ35035129
A chemical approach for identifying O-GlcNAc-modified proteins in cellsQ35242785
Regulation of CK2 by phosphorylation and O-GlcNAcylation revealed by semisynthesisQ35783386
Dynamic O-GlcNAc modification regulates CREB-mediated gene expression and memory formationQ35784568
O-GlcNAc signalling: implications for cancer cell biologyQ35793071
Cross talk between O-GlcNAcylation and phosphorylation: roles in signaling, transcription, and chronic diseaseQ35804446
The dynamic stress-induced “O-GlcNAc-ome” highlights functions for O-GlcNAc in regulating DNA damage/repair and other cellular pathwaysQ35898104
Lectin-based structural glycomics: glycoproteomics and glycan profilingQ35910289
O-GlcNAcylation of kinasesQ36070732
Peptide identification by tandem mass spectrometry with alternate fragmentation modesQ36211835
Monoclonal antibodies identify a group of nuclear pore complex glycoproteinsQ36216116
Nuclear pore complex glycoproteins contain cytoplasmically disposed O-linked N-acetylglucosamineQ36216148
O-GlcNAc cycling modulates neurodegenerationQ36378423
Identification of O-linked N-acetylglucosamine (O-GlcNAc)-modified osteoblast proteins by electron transfer dissociation tandem mass spectrometry reveals proteins critical for bone formationQ36742428
Selected reaction monitoring for quantitative proteomics: a tutorialQ36973024
O-linked GlcNAc modification of cardiac myofilament proteins: a novel regulator of myocardial contractile functionQ37040657
Site-specific GlcNAcylation of human erythrocyte proteins: potential biomarker(s) for diabetesQ37066864
O-GlcNAcylation: A New Cancer Hallmark?Q37086952
Dynamic O-GlcNAcylation and its roles in the cellular stress response and homeostasis.Q37099485
Loss of p53 enhances catalytic activity of IKKbeta through O-linked beta-N-acetyl glucosamine modificationQ37117710
Cracking the O-GlcNAc code in metabolism.Q37197417
Identification of protein O-GlcNAcylation sites using electron transfer dissociation mass spectrometry on native peptidesQ37211310
Chemical derivatization of peptide carboxyl groups for highly efficient electron transfer dissociationQ37308269
O-GlcNAc cycling: implications for neurodegenerative disordersQ37376816
SPINDLY, a tetratricopeptide repeat protein involved in gibberellin signal transduction in ArabidopsisQ37393011
Detecting the "O-GlcNAc-ome"; detection, purification, and analysis of O-GlcNAc modified proteinsQ37412378
Mass spectrometry-based label-free quantitative proteomicsQ37416474
18O2-labeling in quantitative proteomic strategies: a status reportQ37429056
O-GlcNAcomics--Revealing roles of O-GlcNAcylation in disease mechanisms and development of potential diagnosticsQ37445785
Two-dimensional gel-based approaches for the assessment of N-Linked and O-GlcNAc glycosylation in human and simian immunodeficiency virusesQ37447351
The intersections between O-GlcNAcylation and phosphorylation: implications for multiple signaling pathwaysQ37479201
Electron transfer dissociation (ETD): the mass spectrometric breakthrough essential for O-GlcNAc protein site assignments-a study of the O-GlcNAcylated protein host cell factor C1Q37705337
Site-specific interplay between O-GlcNAcylation and phosphorylation in cellular regulationQ37736782
P433issue1
P304page(s)8
P577publication date2014-03-05
P1433published inClinical ProteomicsQ5133793
P1476titleO-GlcNAc profiling: from proteins to proteomes
P478volume11

Reverse relations

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