Evolutionary engineering by genome shuffling

scientific article published on 05 March 2014

Evolutionary engineering by genome shuffling is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

External links are
P6179Dimensions Publication ID1045115871
P356DOI10.1007/S00253-014-5616-8
P698PubMed publication ID24595425

P2093author name stringVincent J J Martin
Damien Biot-Pelletier
P2860cites workMultiplex genome engineering using CRISPR/Cas systemsQ24609428
Cyclobutane-Type Pyrimidine Dimers in PolynucleotidesQ28251703
Programming cells by multiplex genome engineering and accelerated evolutionQ28253066
Visualization of protoplast fusion and quantitation of recombination in fused protoplasts of auxotrophic strains of Escherichia coli.Q51425122
Genome shuffling of Streptomyces roseosporus for improving daptomycin production.Q51758599
Enhanced succinic acid production by Actinobacillus succinogenes after genome shuffling.Q51811533
Probing the molecular mechanisms for pristinamycin yield enhancement in Streptomyces pristinaespiralis.Q54291505
Genome shuffling of Streptomyces gilvosporeus for improving natamycin production.Q54309395
Genome shuffling of Lactobacillus for improved acid toleranceQ56900789
Improved ethanol production by a xylose-fermenting recombinant yeast strain constructed through a modified genome shuffling methodQ28727344
Genome shuffling leads to rapid phenotypic improvement in bacteriaQ30809181
Genome-shuffling improved acid tolerance and L-lactic acid volumetric productivity in Lactobacillus rhamnosusQ30830259
Genome shuffling of Streptomyces sp. U121 for improved production of hydroxycitric acidQ33260547
Genome shuffling enhanced L-lactic acid production by improving glucose tolerance of Lactobacillus rhamnosusQ33320726
Genome shuffling to improve thermotolerance, ethanol tolerance and ethanol productivity of Saccharomyces cerevisiaeQ33375107
Strain improvement of the pentose-fermenting yeast Pichia stipitis by genome shufflingQ33542901
Random mutagenesis using a mutator strain.Q33647057
PCRless library mutagenesis via oligonucleotide recombination in yeastQ33714885
Genome shuffling enhanced ε-poly-L-lysine production by improving glucose tolerance of Streptomyces graminearusQ34074323
Using transcription machinery engineering to elicit complex cellular phenotypesQ34074408
Recent advances in large-scale transposon mutagenesisQ34134782
Genome shuffling of Bacillus amyloliquefaciens for improving antimicrobial lipopeptide production and an analysis of relative gene expression using FQ RT-PCR.Q34164558
A novel strategy to construct yeast Saccharomyces cerevisiae strains for very high gravity fermentationQ34170670
A set of lacZ mutations in Escherichia coli that allow rapid detection of each of the six base substitutionsQ34290231
Homologous DNA targeting with RecA protein-coated short DNA probes and electron microscope mapping on linear duplex moleculesQ36767401
Beyond toothpicks: new methods for isolating mutant bacteriaQ36901557
Helical RecA nucleoprotein filaments mediate homologous pairing and strand exchangeQ38648290
Genome shuffling improves degradation of the anthropogenic pesticide pentachlorophenol by Sphingobium chlorophenolicum ATCC 39723.Q40744331
Development of a D-xylose fermenting and inhibitor tolerant industrial Saccharomyces cerevisiae strain with high performance in lignocellulose hydrolysates using metabolic and evolutionary engineering.Q41394061
Saccharomyces cerevisiae genome shuffling through recursive population mating leads to improved tolerance to spent sulfite liquorQ41829501
EMS and UV mutagenesis in yeastQ42162897
Genome shuffling in Clostridium diolis DSM 15410 for improved 1,3-propanediol productionQ42181407
Genome shuffling of Propionibacterium shermanii for improving vitamin B12 production and comparative proteome analysisQ43018147
Genome shuffling of Zygosaccharomyces rouxii to accelerate and enhance the flavour formation of soy sauceQ43114106
Protoplast mutation and genome shuffling induce the endophytic fungus Tubercularia sp. TF5 to produce new compoundsQ43128505
Strain improvement of Sporolactobacillus inulinus ATCC 15538 for acid tolerance and production of D-lactic acid by genome shufflingQ43272216
Combining genome shuffling and interspecific hybridization among Streptomyces improved ε-poly-L-lysine productionQ43618922
Genome shuffling of Penicillium citrinum for enhanced production of nuclease P1.Q44713384
Molecular identification using ITS sequences and genome shuffling to improve 2-deoxyglucose tolerance and xylanase activity of marine-derived fungus, Aspergillus sp. NRCF5.Q45256029
Enhanced degradation of TNT by genome-shuffled Stenotrophomonas maltophilia OK-5.Q45959649
Generation of high-yield rapamycin-producing strains through protoplasts-related techniquesQ46101349
Improved production of ethanol by novel genome shuffling in Saccharomyces cerevisiaeQ46123107
Enhanced production of spinosad in Saccharopolyspora spinosa by genome shufflingQ46170222
Targeting in linear DNA duplexes with two complementary probe strands for hybrid stabilityQ46266242
Genome shuffling of Aspergillus niger for improving transglycosylation activityQ46421272
Evolution of Streptomyces pristinaespiralis for resistance and production of pristinamycin by genome shufflingQ46548958
Genome shuffling of Lactobacillus delbrueckii mutant and Bacillus amyloliquefaciens through protoplasmic fusion for L-lactic acid production from starchy wastesQ46593687
Spontaneous mutators in bacteria: insights into pathways of mutagenesis and repairQ46617407
Screening and breeding of high taxol producing fungi by genome shufflingQ46774677
Genome shuffling improves production of cellulase by Penicillium decumbens JU-A10.Q47680871
Streptomycin resistance-aided genome shuffling to improve doramectin productivity of Streptomyces avermitilis NEAU1069.Q51009610
P433issue9
P407language of work or nameEnglishQ1860
P304page(s)3877-3887
P577publication date2014-03-05
P1433published inApplied Microbiology and BiotechnologyQ13553694
P1476titleEvolutionary engineering by genome shuffling
P478volume98

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cites work (P2860)
Q35551491Combinatorial and high-throughput screening approaches for strain engineering
Q88984472Combined Drug Resistance Mutations Substantially Enhance Enzyme Production in Paenibacillus agaridevorans
Q35368081Deconstructing the genetic basis of spent sulphite liquor tolerance using deep sequencing of genome-shuffled yeast
Q57814102Determinants of selection in yeast evolved by genome shuffling
Q50949974Determinants of tolerance to inhibitors in hardwood spent sulfite liquor in genome shuffled Pachysolen tannophilus strains.
Q26823491Directed evolution combined with synthetic biology strategies expedite semi-rational engineering of genes and genomes
Q51483814Enhanced butanol production from cassava with Clostridium acetobutylicum by genome shuffling.
Q38268949Genetic improvement of native xylose-fermenting yeasts for ethanol production
Q48126491Genome Shuffling of Stenotrophomonas maltophilia OK-5 for Improving the Degradation of Explosive RDX (Hexahydro-1,3,5-trinitro-1,3,5-triazine).
Q92056819Genome shuffling improved acid-tolerance and succinic acid production of Actinobacillus succinogenes
Q50963361Genome shuffling of Colletotrichum lini for improving 3β,7α,15α-trihydroxy-5-androsten-17-one production from dehydroepiandrosterone.
Q41516046Improvement of Bacillus subtilis for poly-γ-glutamic acid production by genome shuffling
Q47328121Improvement of Xylose Fermentation Ability under Heat and Acid Co-Stress in Saccharomyces cerevisiae Using Genome Shuffling Technique
Q59341148Improving Iturin A Production of by Genome Shuffling and Its Inhibition Against in Orange Juice
Q92891437Kick-starting evolution efficiency with an autonomous evolution mutation system
Q28652588Large-scale robot-assisted genome shuffling yields industrial Saccharomyces cerevisiae yeasts with increased ethanol tolerance
Q58786461Linking genotype and phenotype in an economically viable propionic acid biosynthesis process
Q58831897Microbial Propionic Acid Production
Q89496591Optimization of Protoplast Preparation and Regeneration of a Medicinal Fungus Antrodia cinnamomea
Q51376151Optimization of genome shuffling for high-yield production of the antitumor deacetylmycoepoxydiene in an endophytic fungus of mangrove plants.
Q35630262Rapid prototyping of microbial cell factories via genome-scale engineering.

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