Simultaneous improvement of specificity and affinity of aptamers against Streptococcus mutans by in silico maturation for biosensor development.

scientific article published on 25 September 2013

Simultaneous improvement of specificity and affinity of aptamers against Streptococcus mutans by in silico maturation for biosensor development. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1002/BIT.25111
P698PubMed publication ID24018905

P50authorKazunori IkebukuroQ44189176
Koji SodeQ55188802
Wataru YoshidaQ57058931
Nasa SavoryQ84692584
P2093author name stringKoichi Abe
Stefano Ferri
Hijiri Hasegawa
Kaori Tsukakoshi
Yayoi Takahashi
Madoka Takase
Shizuko Kumazawa
P2860cites workArray-based evolution of DNA aptamers allows modelling of an explicit sequence-fitness landscapeQ38358691
Screening of DNA aptamer against mouse prion protein by competitive selectionQ43189229
Circular dichroism of quadruplex DNAs: applications to structure, cation effects and ligand bindingQ46925718
Visualization of G-quadruplexes by using a BODIPY-labeled macrocyclic heptaoxazole.Q50555616
Characterization and application of aptamers for Taq DNA polymerase selected using an evolution-mimicking algorithm.Q51933001
Mfold web server for nucleic acid folding and hybridization predictionQ24498105
A novel method of screening thrombin-inhibiting DNA aptamers using an evolution-mimicking algorithmQ24816305
Systematic evolution of ligands by exponential enrichment: RNA ligands to bacteriophage T4 DNA polymeraseQ27860794
In vitro selection of RNA molecules that bind specific ligandsQ27861109
Probing the SELEX process with next-generation sequencingQ28740666
Aptamer selection based on inhibitory activity using an evolution-mimicking algorithmQ33248581
Aptamers generated from cell-SELEX for molecular medicine: a chemical biology approachQ33598723
Selection of DNA aptamer against prostate specific antigen using a genetic algorithm and application to sensing.Q33652031
Quantitative selection of DNA aptamers through microfluidic selection and high-throughput sequencingQ33655937
Fluorescence-activated cell sorting for aptamer SELEX with cell mixturesQ33762078
Selection of DNA aptamers that recognize α-synuclein oligomers using a competitive screening method.Q34303977
In vitro RNA random pools are not structurally diverse: a computational analysisQ34366408
Aptamer selection based on G4-forming promoter region.Q34764323
Aptamers evolved from live cells as effective molecular probes for cancer studyQ35033059
Selection is more intelligent than design: improving the affinity of a bivalent ligand through directed evolutionQ36478067
Surface immobilization methods for aptamer diagnostic applicationsQ36949875
Aptasensors for detection of microbial and viral pathogensQ37360733
Aptamer from whole-bacterium SELEX as new therapeutic reagent against virulent Mycobacterium tuberculosisQ38302631
In silico maturation of binding-specificity of DNA aptamers against Proteus mirabilisQ38316483
Affinity improvement of a VEGF aptamer by in silico maturation for a sensitive VEGF-detection system.Q38319303
Development of a novel biosensing system based on the structural change of a polymerized guanine-quadruplex DNA nanostructureQ38333955
Aptamer evolution for array-based diagnosticsQ38354972
P433issue3
P921main subjectStreptococcus mutansQ131452
in silicoQ192572
biosensorQ669391
P304page(s)454-461
P577publication date2013-09-25
P1433published inBiotechnology and BioengineeringQ4915339
P1476titleSimultaneous improvement of specificity and affinity of aptamers against Streptococcus mutans by in silico maturation for biosensor development
P478volume111

Reverse relations

cites work (P2860)
Q48259083Development of HGF-binding aptamers with the combination of G4 promoter-derived aptamer selection and in silico maturation.
Q38289313Development of a DNA aptamer that binds specifically to group A Streptococcus serotype M3.
Q38295068Identification of RNA Oligonucleotides Binding to Several Proteins from Potential G-Quadruplex Forming Regions in Transcribed Pre-mRNA.
Q35996900Isolation of an Aptamer that Binds Specifically to E. coli.
Q26752642Methods for Improving Aptamer Binding Affinity
Q38443249Predicting the Uncertain Future of Aptamer-Based Diagnostics and Therapeutics.
Q30406535Single-Stranded DNA Aptamers against Pathogens and Toxins: Identification and Biosensing Applications
Q92219708Updates on Aptamer Research

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