Polymorphisms and genomic organization of repetitive DNA from centromeric regions of Arabidopsis chromosomes

scientific article

Polymorphisms and genomic organization of repetitive DNA from centromeric regions of Arabidopsis chromosomes is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1105/TPC.11.1.31
P698PubMed publication ID9878630
P5875ResearchGate publication ID13409603

P2093author name stringOgura Y
Heslop-Harrison JS
Murata M
Schwarzacher T
Motoyoshi F
P2860cites workPhysical map and organization of Arabidopsis thaliana chromosome 4Q71768352
Construction of a panel of chromosome-specific oligonucleotide probes (PRINS-primers) useful for the identification of individual human chromosomes in situQ72014116
Dense nonsymmetrical DNA methylation resulting from repeat-induced point mutation in NeurosporaQ72653430
Arabidopsis thaliana centromere regions: genetic map positions and repetitive DNA structureQ73884297
The chromosomal distributions of Ty1-copia group retrotransposable elements in higher plants and their implications for genome evolutionQ74081128
Neocentromeres, the Y chromosome and centromere evolutionQ74337750
Objective: The Complete Sequence of a Plant GenomeQ74801344
Structure and molecular organization of the centromere-kinetochore complexQ75293042
Organisation and origin of a B chromosome centromeric sequence from Brachycome dichromosomaticaQ28296772
Formation of de novo centromeres and construction of first-generation human artificial microchromosomesQ28306987
Molecular drive: a cohesive mode of species evolutionQ29541494
Nucleotide specificity at the boundary and size requirement of the target sites recognized by human centromere protein B (CENP-B) in vitroQ32067951
Assaying genome-wide recombination and centromere functions with Arabidopsis tetrads.Q35674183
A survey of the genomic distribution of alpha satellite DNA on all the human chromosomes, and derivation of a new consensus sequenceQ35917829
A conserved repetitive DNA element located in the centromeres of cereal chromosomesQ35949446
Characterization of highly repetitive sequences of Arabidopsis thalianaQ36058775
Surprising deficiency of CENP-B binding sites in African green monkey alpha-satellite DNA: implications for CENP-B function at centromeresQ36562405
Cloning and characterization of centromeric DNA from Neurospora crassaQ36647263
A physical map of chromosome 2 of Arabidopsis thalianaQ36804955
Linked Spontaneous CG→TA Mutations at CpG Sites in the Gene for Protein Kinase Regulatory SubunitQ36813056
Comparative analysis of the chromosomal and genomic organization of Ty1-copia-like retrotransposons in pteridophytes, gymnosperms and angiospermsQ36846998
The STR120 satellite DNA of soybean: organization, evolution and chromosomal specificityQ36890399
Centromeres of budding and fission yeastsQ37940457
The yeast centromere CDEI/Cpf1 complex: differences between in vitro binding and in vivo functionQ38306103
Centromere protein B assembles human centromeric alpha-satellite DNA at the 17-bp sequence, CENP-B boxQ38330653
Chromosome-specific organization of human alpha satellite DNA.Q40611449
The centromere of budding yeastQ40850526
The elusive centromere: sequence divergence and functional conservation.Q41068190
Human centromeric DNAs.Q41578221
Structure and function of Schizosaccharomyces pombe centromeres.Q45964273
A novel repetitive sequence of sugar cane, SCEN family, locating on centromeric regionsQ47750109
Centromeres, CENP-B and Tigger too.Q48052113
A cereal centromeric sequenceQ48057555
DNA regions flanking the major Arabidopsis thaliana satellite are principally enriched in Athila retroelement sequencesQ48065713
High-resolution mapping of repetitive DNA by in situ hybridization: molecular and chromosomal features of prominent dispersed and discretely localized DNA families from the wild beet species Beta procumbensQ48065908
The large-scale genomic organization of repetitive DNA families at the telomeres of rye chromosomesQ48069559
Molecular and physical organization of highly repetitive, undermethylated DNA from Pennisetum glaucumQ48080007
Centromeric repetitive sequences in Arabidopsis thalianaQ48080695
Mouse centromere mapping using oligonucleotide probes that detect variants of the minor satelliteQ48084671
Gene inactivation in Arabidopsis thaliana is not accompanied by an accumulation of repeat-induced point mutations.Q54197660
Multiple repetitive DNA sequences in the paracentromeric regions of Arabidopsis thaliana LQ58884516
Analysis of a repetitive DNA family from Arabidopsis arenosa and relationships between Arabidopsis speciesQ58884581
Visualization of centromeric and nucleolar DNA in fission yeast by fluorescence in situ hybridizationQ68204399
Concerted evolution of light satellite DNA in genus Mus implies amplification and homogenization of large blocks of repeatsQ69357472
P433issue1
P304page(s)31-42
P577publication date1999-01-01
P1433published inThe Plant CellQ3988745
P1476titlePolymorphisms and genomic organization of repetitive DNA from centromeric regions of Arabidopsis chromosomes
P478volume11

Reverse relations

cites work (P2860)
Q54701015A tandem repetitive sequence located in the centromeric region of common wheat (Triticum aestivum) chromosomes.
Q37603884An overview of plant centromeres
Q37173628An overview of plant chromosome structure
Q40414097Analysis of 5S rDNA arrays in Arabidopsis thaliana: physical mapping and chromosome-specific polymorphisms
Q39753499Analysis of the 5S RNA pool in Arabidopsis thaliana: RNAs are heterogeneous and only two of the genomic 5S loci produce mature 5S RNA.
Q46869080BIN4, a novel component of the plant DNA topoisomerase VI complex, is required for endoreduplication in Arabidopsis
Q46489766CENH3 morphogenesis reveals dynamic centromere associations during synaptonemal complex formation and the progression through male meiosis in hexaploid wheat
Q42317728Centromere location in Arabidopsis is unaltered by extreme divergence in CENH3 protein sequence
Q34373777Centromere satellites from Arabidopsis populations: maintenance of conserved and variable domains
Q38209751Centromeres and kinetochores of Brassicaceae.
Q96018262Characterization of centromeric satellite DNAs (MALREP) in the Asian swamp eel (Monopterus albus) suggests the possible origin of repeats from transposable elements
Q34617267Chromatin immunoprecipitation reveals that the 180-bp satellite repeat is the key functional DNA element of Arabidopsis thaliana centromeres
Q89810205Chromosome-level assemblies of multiple Arabidopsis genomes reveal hotspots of rearrangements with altered evolutionary dynamics
Q33917910Comparative genome organization in plants: from sequence and markers to chromatin and chromosomes.
Q28755338Convergent domestication of pogo-like transposases into centromere-binding proteins in fission yeast and mammals
Q35137101Cytogenetic tools for Arabidopsis thaliana
Q34361252DNA methylation controls histone H3 lysine 9 methylation and heterochromatin assembly in Arabidopsis.
Q35603418DNA, chromosomes, and in situ hybridization
Q34325316Determining centromere identity: cyclical stories and forking paths.
Q91973723Differential Genome Size and Repetitive DNA Evolution in Diploid Species of Melampodium sect. Melampodium (Asteraceae)
Q24813550Differential regulation of strand-specific transcripts from Arabidopsis centromeric satellite repeats
Q44390079Divergence of satellite DNA and interspersion of dispersed repeats in the genome of the wild beet Beta procumbens
Q64388934Diverse patterns of the tandem repeats organization in rye chromosomes
Q35612536Diverse sequences within Tlr elements target programmed DNA elimination in Tetrahymena thermophila
Q33357968Diversity of a complex centromeric satellite and molecular characterization of dispersed sequence families in sugar beet (Beta vulgaris).
Q42941299Dysfunction of chromatin assembly factor 1 induces shortening of telomeres and loss of 45S rDNA in Arabidopsis thaliana
Q46752051Ecotype-specific and chromosome-specific expansion of variant centromeric satellites in Arabidopsis thaliana
Q48075232Epigenetic modification of centromeric chromatin: hypomethylation of DNA sequences in the CENH3-associated chromatin in Arabidopsis thaliana and maize
Q36303797Functional elements residing within satellite DNAs
Q53569899Genetic and epigenetic modifications to the BBAA component of common wheat during its evolutionary history at the hexaploid level.
Q47322161Genome size, karyotype, meiosis and a novel extra chromosome in Torenia fournieri, T. baillonii and their hybrid
Q50720987Genomic and genetic characterization of rice Cen3 reveals extensive transcription and evolutionary implications of a complex centromere.
Q73453530Integrated cytogenetic map of chromosome arm 4S of A. thaliana: structural organization of heterochromatic knob and centromere region
Q34395180Interphase chromosomes in Arabidopsis are organized as well defined chromocenters from which euchromatin loops emanate
Q34362862Long-time evolution and highly dynamic satellite DNA in leptodactylid and hylodid frogs
Q30750101Meiosis, recombination and chromosomes: a review of gene isolation and fluorescent in situ hybridization data in plants
Q47286604Molecular cytogenetic mapping of Humulus lupulus sex chromosomes.
Q49167902N-terminal domains of plant poly(ADP-ribose) polymerases define their association with mitotic chromosomes.
Q24805921Nucleomorph genomes: much ado about practically nothing
Q57052868Organisation of the plant genome in chromosomes
Q36064513Organization and evolution of highly repeated satellite DNA sequences in plant chromosomes
Q79424335Patterns of DNA variation among three centromere satellite families in Arabidopsis halleri and A. lyrata
Q34192362Perspective: transposable elements, parasitic DNA, and genome evolution
Q41886972RNA polymerase V functions in Arabidopsis interphase heterochromatin organization independently of the 24-nt siRNA-directed DNA methylation pathway
Q62569115Rapid divergence of repetitive DNAs in Brassica relatives
Q34249786Recombination, rearrangement, reshuffling, and divergence in a centromeric region of rice
Q34338870Retrotransposon accumulation and satellite amplification mediated by segmental duplication facilitate centromere expansion in rice
Q79762059Sequence homogenization and chromosomal localization of VicTR-B satellites differ between closely related Vicia species
Q39516316Sequence organization of barley centromeres
Q38635477Single-molecule sequencing and Hi-C-based proximity-guided assembly of amaranth (Amaranthus hypochondriacus) chromosomes provide insights into genome evolution
Q26773117Structure and Function of Centromeric and Pericentromeric Heterochromatin in Arabidopsis thaliana
Q48160315Structure and genomic organization of centromeric repeats in Arabidopsis species
Q35137111Tandemly repeated DNA sequences and centromeric chromosomal regions of Arabidopsis species.
Q39528168Targeting of the yeast Ty5 retrotransposon to silent chromatin is mediated by interactions between integrase and Sir4p
Q48345193The centromere1 (CEN1) region of Arabidopsis thaliana: architecture and functional impact of chromatin
Q51940052The clustering of four subfamilies of satellite DNA at individual chromosome ends in Silene latifolia.
Q35032146The large-scale organization of the centromeric region in Beta species
Q22065973The most frequent short sequences in non-coding DNA
Q53628041The origin, meiotic behavior, and transmission of a novel minichromosome in Arabidopsis thaliana.
Q33845509Transposable element contributions to plant gene and genome evolution
Q35137115Using Arabidopsis to understand centromere function: progress and prospects

Search more.