| review article | Q7318358 |
| scholarly article | Q13442814 |
| P356 | DOI | 10.1016/J.FEBSLET.2015.04.015 |
| P698 | PubMed publication ID | 25912651 |
| P50 | author | Benjamin Audit | Q60667764 |
| Rasha E Boulos | Q85317493 | ||
| Alain Arneodo | Q41047075 | ||
| Francoise Argoul | Q60587103 | ||
| P2093 | author name string | Guénola Drillon | |
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| Hyperdynamic plasticity of chromatin proteins in pluripotent embryonic stem cells. | Q29614677 | ||
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| The mammalian epigenome | Q29615763 | ||
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| Cohesin organizes chromatin loops at DNA replication factories. | Q30431896 | ||
| Molecular crowding affects diffusion and binding of nuclear proteins in heterochromatin and reveals the fractal organization of chromatin | Q30492490 | ||
| Circular chromosome conformation capture (4C) uncovers extensive networks of epigenetically regulated intra- and interchromosomal interactions. | Q33260024 | ||
| Chromosome territories have a highly nonspherical morphology and nonrandom positioning | Q33302140 | ||
| Structure and dynamics of interphase chromosomes | Q33363082 | ||
| Global reorganization of replication domains during embryonic stem cell differentiation | Q33374614 | ||
| Analysis of fine-scale mammalian evolutionary breakpoints provides new insight into their relation to genome organisation | Q33486719 | ||
| Allele-specific genome-wide profiling in human primary erythroblasts reveal replication program organization | Q33553015 | ||
| Sequencing newly replicated DNA reveals widespread plasticity in human replication timing | Q33591861 | ||
| A chromatin structure-based model accurately predicts DNA replication timing in human cells | Q33597313 | ||
| Genome-wide views of chromatin structure | Q33611702 | ||
| Genome-wide dynamics of replication timing revealed by in vitro models of mouse embryogenesis | Q33618903 | ||
| Comparative analysis of DNA replication timing reveals conserved large-scale chromosomal architecture. | Q33628761 | ||
| The organization of replication and transcription | Q33655131 | ||
| Human genome replication proceeds through four chromatin states. | Q35018004 | ||
| Epigenomic replication: linking epigenetics to DNA replication | Q35158103 | ||
| The spatiotemporal program of DNA replication is associated with specific combinations of chromatin marks in human cells | Q35160747 | ||
| Embryonic stem cell specific "master" replication origins at the heart of the loss of pluripotency | Q35556683 | ||
| Human gene organization driven by the coordination of replication and transcription. | Q35946493 | ||
| Chromatin organization in the mammalian nucleus | Q35983679 | ||
| Chromatin-interaction compartment switch at developmentally regulated chromosomal domains reveals an unusual principle of chromatin folding | Q36140413 | ||
| CTCF-mediated functional chromatin interactome in pluripotent cells | Q36218315 | ||
| Evidence for the organization of chromatin in megabase pair-sized loops arranged along a random walk path in the human G0/G1 interphase nucleus | Q36236042 | ||
| A fractal model for nuclear organization: current evidence and biological implications | Q36305576 | ||
| Chromatin loops, gene positioning, and gene expression | Q36323276 | ||
| 3D chromatin conformation correlates with replication timing and is conserved in resting cells | Q36341542 | ||
| Megabase replication domains along the human genome: relation to chromatin structure and genome organisation | Q38059654 | ||
| Epigenetic programming and reprogramming during development | Q38086774 | ||
| Functional implications of genome topology. | Q38086775 | ||
| Genome architecture: domain organization of interphase chromosomes | Q38090110 | ||
| CTCF and cohesin: linking gene regulatory elements with their targets | Q38090111 | ||
| Genetic and epigenetic determinants of DNA replication origins, position and activation | Q38094410 | ||
| From simple bacterial and archaeal replicons to replication N/U-domains. | Q38149669 | ||
| Genome regulation at the peripheral zone: lamina associated domains in development and disease. | Q38189917 | ||
| Stochastic genome-nuclear lamina interactions: modulating roles of Lamin A and BAF. | Q38203362 | ||
| Chromatin-driven behavior of topologically associating domains | Q38256534 | ||
| The spatial organization of human chromosomes within the nuclei of normal and emerin-mutant cells. | Q38494604 | ||
| Organization of early and late replicating DNA in human chromosome territories | Q38500834 | ||
| The pluripotent genome in three dimensions is shaped around pluripotency factors | Q39120783 | ||
| Single-cell dynamics of genome-nuclear lamina interactions | Q39176932 | ||
| Linking the DNA strand asymmetry to the spatio-temporal replication program. I. About the role of the replication fork polarity in genome evolution | Q39273323 | ||
| Genome architectures revealed by tethered chromosome conformation capture and population-based modeling | Q39422331 | ||
| Replication-associated mutational asymmetry in the human genome | Q39582800 | ||
| A high proliferation rate is required for cell reprogramming and maintenance of human embryonic stem cell identity | Q39618673 | ||
| Intra- and inter-chromosomal interactions correlate with CTCF binding genome wide. | Q39636446 | ||
| Replication and subnuclear location dynamics of the immunoglobulin heavy-chain locus in B-lineage cells. | Q39674976 | ||
| Replication fork movement sets chromatin loop size and origin choice in mammalian cells | Q39948771 | ||
| Open chromatin encoded in DNA sequence is the signature of 'master' replication origins in human cells. | Q39956231 | ||
| A three-dimensional model of the yeast genome | Q40674029 | ||
| High order chromatin architecture shapes the landscape of chromosomal alterations in cancer | Q40719732 | ||
| Replication-timing-correlated spatial chromatin arrangements in cancer and in primate interphase nuclei | Q41977139 | ||
| Identification of higher-order functional domains in the human ENCODE regions | Q41981321 | ||
| Insights into interphase large-scale chromatin structure from analysis of engineered chromosome regions | Q42189404 | ||
| Molecular maps of the reorganization of genome-nuclear lamina interactions during differentiation | Q42472280 | ||
| Entropic organization of interphase chromosomes. | Q42570946 | ||
| Do replication forks control late origin firing in Saccharomyces cerevisiae? | Q42587559 | ||
| Long-range chromatin contacts in embryonic stem cells reveal a role for pluripotency factors and polycomb proteins in genome organization | Q42618147 | ||
| Multiscale analysis of genome-wide replication timing profiles using a wavelet-based signal-processing algorithm. | Q44399629 | ||
| Revealing long-range interconnected hubs in human chromatin interaction data using graph theory. | Q50147074 | ||
| LBR and lamin A/C sequentially tether peripheral heterochromatin and inversely regulate differentiation. | Q52633974 | ||
| The role of topological constraints in the kinetics of collapse of macromolecules | Q56774949 | ||
| Crumpled Globule Model of the Three-Dimensional Structure of DNA | Q56906733 | ||
| Diffusion in disordered media | Q58294989 | ||
| Large-scale chromatin structure and function. | Q33680832 | ||
| Chromosome territories | Q33693822 | ||
| Organization of the mitotic chromosome | Q33693950 | ||
| Cell type specificity of chromatin organization mediated by CTCF and cohesin. | Q33734436 | ||
| Impact of replication timing on non-CpG and CpG substitution rates in mammalian genomes | Q33762440 | ||
| Distinct epigenomic landscapes of pluripotent and lineage-committed human cells. | Q33842527 | ||
| Evolutionarily conserved replication timing profiles predict long-range chromatin interactions and distinguish closely related cell types | Q33881351 | ||
| Replication-associated strand asymmetries in mammalian genomes: toward detection of replication origins | Q33895906 | ||
| Heterogeneity of eukaryotic replicons, replicon clusters, and replication foci | Q33905540 | ||
| Close 3D proximity of evolutionary breakpoints argues for the notion of spatial synteny | Q33929552 | ||
| Replication timing: a fingerprint for cell identity and pluripotency | Q34058046 | ||
| Modeling epigenome folding: formation and dynamics of topologically associated chromatin domains. | Q34115510 | ||
| Evidence for sequential and increasing activation of replication origins along replication timing gradients in the human genome | Q34119004 | ||
| Eukaryotic DNA replication origins: many choices for appropriate answers | Q34139588 | ||
| Systematic protein location mapping reveals five principal chromatin types in Drosophila cells | Q34141226 | ||
| The fractal globule as a model of chromatin architecture in the cell | Q34161178 | ||
| Replication fork polarity gradients revealed by megabase-sized U-shaped replication timing domains in human cell lines | Q34229543 | ||
| Three-dimensional folding and functional organization principles of the Drosophila genome | Q34248756 | ||
| Chromatin structure and replication origins: determinants of chromosome replication and nuclear organization | Q34254857 | ||
| Constitutive nuclear lamina-genome interactions are highly conserved and associated with A/T-rich sequence | Q34309873 | ||
| Genome-wide chromatin state transitions associated with developmental and environmental cues | Q34323419 | ||
| Independence of repressive histone marks and chromatin compaction during senescent heterochromatic layer formation | Q34337209 | ||
| Exploring the three-dimensional organization of genomes: interpreting chromatin interaction data | Q34343663 | ||
| Replication and transcription: shaping the landscape of the genome | Q34442158 | ||
| Topologically associating domains are stable units of replication-timing regulation | Q34448599 | ||
| A random-walk/giant-loop model for interphase chromosomes | Q34495748 | ||
| Replication timing of the human genome | Q34543543 | ||
| Broad chromosomal domains of histone modification patterns in C. elegans | Q34548272 | ||
| Nuclear organization of active and inactive chromatin domains uncovered by chromosome conformation capture-on-chip (4C). | Q34573154 | ||
| DNA replication timing | Q34654036 | ||
| Temporal and spatial regulation of eukaryotic DNA replication: from regulated initiation to genome-scale timing program | Q34661262 | ||
| Regulating the mammalian genome: the role of nuclear architecture | Q34747131 | ||
| Characterization of constitutive CTCF/cohesin loci: a possible role in establishing topological domains in mammalian genomes | Q34941063 | ||
| P433 | issue | 20 Pt A | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 2944-2957 | |
| P577 | publication date | 2015-04-23 | |
| P1433 | published in | FEBS Letters | Q1388051 |
| P1476 | title | Structural organization of human replication timing domains | |
| P478 | volume | 589 |
| Q38601938 | Cell-to-cell variability and robustness in S-phase duration from genome replication kinetics. |
| Q38744209 | Deciphering DNA replication dynamics in eukaryotic cell populations in relation with their averaged chromatin conformations. |
| Q47105601 | Epigenetic Transitions and Knotted Solitons in Stretched Chromatin. |
| Q51415384 | Genome-wide analysis of replication timing by next-generation sequencing with E/L Repli-seq. |
| Q44874982 | Genomic Analysis of the DNA Replication Timing Program during Mitotic S Phase in Maize (Zea mays) Root Tips |
| Q41291493 | Initial high-resolution microscopic mapping of active and inactive regulatory sequences proves non-random 3D arrangements in chromatin domain clusters |
| Q36343721 | Multi-scale structural community organisation of the human genome. |
| Q47146803 | Optical computed tomography for spatially isotropic four-dimensional imaging of live single cells |
| Q39030113 | Predicting chromatin architecture from models of polymer physics |
| Q36969038 | Replicating Large Genomes: Divide and Conquer |
| Q92442397 | Resolution of Complex Issues in Genome Regulation and Cancer Requires Non-Linear and Network-Based Thermodynamics |
| Q52586071 | Similarity in replication timing between polytene and diploid cells is associated with the organization of the Drosophila genome. |
| Q59810213 | The Protective Role of Dormant Origins in Response to Replicative Stress |
| Q55505048 | The eukaryotic bell-shaped temporal rate of DNA replication origin firing emanates from a balance between origin activation and passivation. |
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