Biomarker Discovery Using Statistically Significant Gene Sets

scientific article published on April 1, 2011

Biomarker Discovery Using Statistically Significant Gene Sets is …
instance of (P31):
scholarly articleQ13442814

External links are
P8978DBLP publication IDjournals/jcb/KimWA11
P356DOI10.1089/CMB.2010.0085
P953full work available at URLhttp://www.liebertpub.com/doi/full-xml/10.1089/cmb.2010.0085
http://www.liebertpub.com/doi/pdf/10.1089/cmb.2010.0085
https://doi.org/10.1089/cmb.2010.0085
https://europepmc.org/articles/PMC3179615
https://europepmc.org/articles/pmc3179615?pdf=render
https://europepmc.org/articles/PMC3179615?pdf=render
P932PMC publication ID3179615
P698PubMed publication ID21457009
P5875ResearchGate publication ID50986087

P50authorHoon KimQ59545155
P2093author name stringDimitris Anastassiou
John Watkinson
P2860cites workCancer ResearchQ326097
Bioconductor: open software development for computational biology and bioinformaticsQ21194861
Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genesQ24792469
New feature subset selection procedures for classification of expression profilesQ24793696
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Gene selection and classification of microarray data using random forest.Q25255911
Gene expression profiling predicts clinical outcome of breast cancerQ27860732
Molecular classification of cancer: class discovery and class prediction by gene expression monitoringQ27861072
Exploration, normalization, and summaries of high density oligonucleotide array probe level dataQ27861098
A multigene assay to predict recurrence of tamoxifen-treated, node-negative breast cancerQ28297827
Rank products: a simple, yet powerful, new method to detect differentially regulated genes in replicated microarray experimentsQ29616371
A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changesQ29618085
Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arraysQ29618684
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Gene selection for sample classification based on gene expression data: study of sensitivity to choice of parameters of the GA/KNN methodQ30667225
Nonparametric methods for identifying differentially expressed genes in microarray dataQ30746017
Genetic algorithms applied to multi-class prediction for the analysis of gene expression dataQ30757687
Gene selection from microarray data for cancer classification--a machine learning approach.Q30981694
Regularized ROC method for disease classification and biomarker selection with microarray dataQ31012130
A two-sample Bayesian t-test for microarray dataQ31034018
Predicting the prognosis of breast cancer by integrating clinical and microarray data with Bayesian networks.Q31050064
Identification of gene interactions associated with disease from gene expression data using synergy networksQ31144746
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S100A4 accelerates tumorigenesis and invasion of human prostate cancer through the transcriptional regulation of matrix metalloproteinase 9Q35075493
Clinical biomarkers in drug discovery and developmentQ35167912
A review of feature selection techniques in bioinformaticsQ36919689
Translation regulatory factor RBM3 is a proto-oncogene that prevents mitotic catastropheQ37180861
Biomarker Identification by Feature WrappersQ40415443
Computational analysis of the synergy among multiple interacting genesQ42253998
Expression profiling reveals hepsin overexpression in prostate cancer.Q43691850
Significance of gene ranking for classification of microarray samples.Q45965712
Tissue classification with gene expression profiles.Q52926963
Gene Selection for Cancer Classification using Support Vector MachinesQ56535529
Shared MHC class II-dependent melanoma ribosomal protein L8 identified by phage displayQ56894337
Gene expression correlates of clinical prostate cancer behaviorQ60156349
Classification, subtype discovery, and prediction of outcome in pediatric acute lymphoblastic leukemia by gene expression profilingQ61910882
Feature Subset Selection by Bayesian network-based optimizationQ62637475
Improved gene selection for classification of microarraysQ73041240
In biomarkers we trust?Q81517118
P433issue10
P407language of work or nameEnglishQ1860
P921main subjectstatisticsQ12483
biomarkerQ864574
statistical modelQ3284399
tumor biomarkerQ66205818
statistical data interpretationQ67369489
P304page(s)1329-1338
P577publication date2011-04-01
P1433published inJournal of Computational BiologyQ6295003
P1476titleBiomarker discovery using statistically significant gene sets
Biomarker Discovery Using Statistically Significant Gene Sets
P478volume18

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cites work (P2860)
Q38881960Detecting pairwise interactive effects of continuous random variables for bimarker identification with small sample size
Q52339616Feature selection with interactions in logistic regression models using multivariate synergies for a GWAS application
Q39298842Unraveling toxicological mechanisms and predicting toxicity classes with gene dysregulation networks

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