GRIFFIN: A versatile methodology for optimization of protein-lipid interfaces for membrane protein simulations.

scientific article published on April 2011

GRIFFIN: A versatile methodology for optimization of protein-lipid interfaces for membrane protein simulations. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1021/CT100576M
P932PMC publication ID3972769
P698PubMed publication ID24707227

P50authorLucy R. ForrestQ57016893
Claudio AnselmiQ57716723
P2093author name stringJosé D Faraldo-Gómez
René Staritzbichler
P2860cites workCHARMM: the biomolecular simulation programQ24658108
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Bioenergetic cost of making an adenosine triphosphate molecule in animal mitochondriaQ27664534
All-atom empirical potential for molecular modeling and dynamics studies of proteinsQ27860468
Scalable molecular dynamics with NAMDQ27860718
Predicting transmembrane protein topology with a hidden Markov model: application to complete genomesQ27860838
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Setting up and optimization of membrane protein simulations.Q30330364
Coarse-grained MD simulations of membrane protein-bilayer self-assembly.Q30368740
g_membed: Efficient insertion of a membrane protein into an equilibrated lipid bilayer with minimal perturbationQ30387289
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A structural mechanism for MscS gating in lipid bilayersQ30435591
Rotation of lipids in membranes: molecular dynamics simulation, 31P spin-lattice relaxation, and rigid-body dynamicsQ31142655
Automated builder and database of protein/membrane complexes for molecular dynamics simulationsQ33298604
Structure of the rotor of the V-Type Na+-ATPase from Enterococcus hiraeQ33986124
Molecular dynamics simulation of the gramicidin channel in a phospholipid bilayerQ35926896
Setting up and running molecular dynamics simulations of membrane proteinsQ36762780
Sensing voltage across lipid membranesQ37069037
Biophysical dissection of membrane proteins.Q37490825
Osmolality, temperature, and membrane lipid composition modulate the activity of betaine transporter BetP in Corynebacterium glutamicumQ42909811
Transmembrane helix structure, dynamics, and interactions: multi-nanosecond molecular dynamics simulationsQ42928688
Structural asymmetry of AcrB trimer suggests a peristaltic pump mechanism.Q50104608
Modulation of glycophorin A transmembrane helix interactions by lipid bilayers: molecular dynamics calculations.Q52074141
Structure, energetics, and dynamics of lipid-protein interactions: A molecular dynamics study of the gramicidin A channel in a DMPC bilayerQ71074649
P433issue4
P921main subjectmembrane proteinQ423042
P304page(s)1167-1176
P577publication date2011-04-01
P1433published inJournal of Chemical Theory and ComputationQ1768377
P1476titleGRIFFIN: A versatile methodology for optimization of protein-lipid interfaces for membrane protein simulations
P478volume7

Reverse relations

cites work (P2860)
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