Biophysical dissection of membrane proteins.

scientific article published on May 2009

Biophysical dissection of membrane proteins. is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P6179Dimensions Publication ID1004070253
P356DOI10.1038/NATURE08142
P2888exact matchhttps://scigraph.springernature.com/pub.10.1038/nature08142
P698PubMed publication ID19458709
P5875ResearchGate publication ID24442890

P50authorStephen H. WhiteQ18159169
P2093author name stringStephen H White
P2860cites workThe Structure of the Potassium Channel: Molecular Basis of K+ Conduction and SelectivityQ22337058
The 2.6 angstrom crystal structure of a human A2A adenosine receptor bound to an antagonistQ24654563
High-resolution crystal structure of an engineered human beta2-adrenergic G protein-coupled receptorQ24657484
Molecular architecture of the rotary motor in ATP synthaseQ27620502
Crystal structure of rhodopsin: A G protein-coupled receptorQ27625972
Structural basis for intramembrane proteolysis by rhomboid serine proteasesQ27640962
The crystal structure of the rhomboid peptidase from Haemophilus influenzae provides insight into intramembrane proteolysisQ27641079
Structure and mechanism of the lactose permease of Escherichia coliQ27641768
Structure of mitochondrial ADP/ATP carrier in complex with carboxyatractylosideQ27642491
Crystal structure of the human beta2 adrenergic G-protein-coupled receptorQ27648868
Structure of a site-2 protease family intramembrane metalloproteaseQ27649234
Crystal structure of squid rhodopsinQ27650621
Crystal structure of the ligand-free G-protein-coupled receptor opsinQ27650885
Structure of a beta1-adrenergic G-protein-coupled receptorQ27651011
The Crystal Structure of a Sodium Galactose Transporter Reveals Mechanistic Insights into Na+/Sugar SymportQ27651031
Structure and Molecular Mechanism of a Nucleobase-Cation-Symport-1 Family TransporterQ27652531
Electron-crystallographic refinement of the structure of bacteriorhodopsinQ27732989
The crystal structure of the light-harvesting complex II (B800-850) from Rhodospirillum molischianumQ27733260
X-ray structure of bacteriorhodopsin at 2.5 angstroms from microcrystals grown in lipidic cubic phasesQ27742848
Complementation cloning of S2P, a gene encoding a putative metalloprotease required for intramembrane cleavage of SREBPsQ28115918
GPCR engineering yields high-resolution structural insights into beta2-adrenergic receptor functionQ28254935
Sterol-regulated release of SREBP-2 from cell membranes requires two sequential cleavages, one within a transmembrane segmentQ28644805
Direct observation of the rotation of F1-ATPaseQ29615360
Crystal structure of a bacterial homologue of Na+/Cl--dependent neurotransmitter transportersQ29616590
Structural diversity of G protein-coupled receptors and significance for drug discoveryQ29616716
The ATP synthase--a splendid molecular machineQ29617444
Structure of a glutamate transporter homologue from Pyrococcus horikoshiiQ30032687
beta-Barrel membrane proteinsQ30168767
Beta-barrel proteins from bacterial outer membranes: structure, function and refoldingQ30175375
Membranes are more mosaic than fluidQ34471724
ATP synthesis driven by proton transport in F1F0-ATP synthaseQ34534259
Structural analysis of a rhomboid family intramembrane protease reveals a gating mechanism for substrate entryQ34581109
Membrane-protein topologyQ34586351
Discovery of new GPCR biology: one receptor structure at a timeQ34920862
Heavier-than-air flying machines are impossible.Q35757370
Protein conformation in cell membrane preparations as studied by optical rotatory dispersion and circular dichroismQ36385833
A limited universe of membrane protein families and foldsQ36458488
Sensing voltage across lipid membranesQ37069037
Membrane proteins: molecular dynamics simulations.Q37136274
Rhomboid protease dynamics and lipid interactionsQ37186369
EmrE, a model for studying evolution and mechanism of ion-coupled transporters.Q37376781
On the use of the transmembrane domain of bacteriorhodopsin as a template for modeling the three-dimensional structure of guanine nucleotide-binding regulatory protein-coupled receptorsQ37599712
Bacteriorhodopsin can be refolded from two independently stable transmembrane helixes and the complementary five-helix fragmentQ41127203
Structure of the protein subunits in the photosynthetic reaction centre of Rhodopseudomonas viridis at 3Å resolutionQ47743729
Crystal structure of a rhomboid family intramembrane protease.Q54453416
Three-dimensional model of purple membrane obtained by electron microscopyQ56672667
Emulating membrane protein evolution by rational designQ56898464
Crystal structure of an integral membrane light-harvesting complex from photosynthetic bacteriaQ58004320
A General Theory of Membrane Transport From Studies of BacteriaQ59099114
Protein Conformations in the Plasma MembraneQ72657222
P433issue7245
P407language of work or nameEnglishQ1860
P921main subjectmembrane proteinQ423042
P304page(s)344-346
P577publication date2009-05-01
P1433published inNatureQ180445
P1476titleBiophysical dissection of membrane proteins
P478volume459

Reverse relations

cites work (P2860)
Q30428754A benchmark server using high resolution protein structure data, and benchmark results for membrane helix predictions
Q24563812A map of dielectric heterogeneity in a membrane protein: the hetero-oligomeric cytochrome b6f complex
Q30417356Accurate de novo structure prediction of large transmembrane protein domains using fragment-assembly and correlated mutation analysis
Q37203963Acrylamide concentration determines the direction and magnitude of helical membrane protein gel shifts
Q33528259Active machine learning for transmembrane helix prediction
Q34613194Alignment of helical membrane protein sequences using AlignMe
Q36371403Altered Escherichia coli membrane protein assembly machinery allows proper membrane assembly of eukaryotic protein vitamin K epoxide reductase.
Q35654071An Approach to Heterologous Expression of Membrane Proteins. The Case of Bacteriorhodopsin
Q42848308Assessing the local structural quality of transmembrane protein models using statistical potentials (QMEANBrane).
Q36290548Assessment of molecular interactions through magnetic relaxation
Q30363780Atomic-level analysis of membrane-protein structure.
Q26778731Biological membranes
Q38275556Chemical synthesis and biophysical applications of membrane proteins
Q42639888Cloning, expression and purification of orthologous membrane proteins: a general protocol for preparation of the histidine sensor kinase ETR1 from different species.
Q34187862Coherent two-dimensional infrared spectroscopy: quantitative analysis of protein secondary structure in solution.
Q30428852Combination of ¹⁵N reverse labeling and afterglow spectroscopy for assigning membrane protein spectra by magic-angle-spinning solid-state NMR: application to the multidrug resistance protein EmrE
Q35615589Computational Tools for Interpreting Ion Channel pH-Dependence
Q30380431Computational analysis of membrane proteins: the largest class of drug targets.
Q33942265Computational design of membrane proteins
Q30389912Conformational analysis of membrane proteins in phospholipid bilayer nanodiscs by hydrogen exchange mass spectrometry
Q82539292Construction of an implicit membrane environment for the lattice Monte Carlo simulation of transmembrane protein
Q27690052Crystal structure of a claudin provides insight into the architecture of tight junctions
Q35122975De novo structure prediction of globular proteins aided by sequence variation-derived contacts
Q41092138Designed multi-stranded heme binding β-sheet peptides in membrane
Q37442956Determination of structural topology of a membrane protein in lipid bilayers using polarization optimized experiments (POE) for static and MAS solid state NMR spectroscopy.
Q34322846Directional interactions and cooperativity between mechanosensitive membrane proteins
Q46023076Dissecting binding of a β-barrel membrane protein by phage display.
Q30153536Dodecyl maltoside protects membrane proteins in vacuo
Q33809069Dynafold: a dynamic programming approach to protein backbone structure determination from minimal sets of Residual Dipolar Couplings
Q42876212Effect of membrane structure on the action of polyenes II: nystatin activity along the phase diagram of ergosterol- and cholesterol-containing POPC membranes
Q57163164Effects of fluidity on the ensemble structure of a membrane embedded α-helical peptide
Q57827792Ermittlung der Konformation von Bacteriorhodopsin-Peptidschleifen in Purpurmembranen durch Festkörper-MAS-NMR-Spektroskopie
Q30425362Evaluation of cell-free protein synthesis for the crystallization of membrane proteins--a case study on a member of the glutamate transporter family from Staphylothermus marinus
Q38127987Fluorine-19 NMR of integral membrane proteins illustrated with studies of GPCRs
Q35894964Food Reformulation, Responsive Regulation, and "Regulatory Scaffolding": Strengthening Performance of Salt Reduction Programs in Australia and the United Kingdom
Q30427675G-protein-coupled receptor structure, ligand binding and activation as studied by solid-state NMR spectroscopy
Q38589483GRIFFIN: A versatile methodology for optimization of protein-lipid interfaces for membrane protein simulations.
Q41844506Glycopeptide capture for cell surface proteomics
Q34117311Heterologous expression of membrane proteins: choosing the appropriate host
Q30371326Hierarchical domain-motion analysis of conformational changes in sarcoplasmic reticulum Ca²⁺-ATPase.
Q39096016High-level expression of a full-length Eph receptor
Q42024403High-performance liquid chromatography separation and intact mass analysis of detergent-solubilized integral membrane proteins
Q27674386High-resolution membrane protein structure by joint calculations with solid-state NMR and X-ray experimental data
Q34468539High-throughput methods for electron crystallography
Q35875913Hydrogen Exchange Mass Spectrometry of Proteins at Langmuir Monolayers
Q35554301Identification of destabilizing and stabilizing mutations of Ste2p, a G protein-coupled receptor in Saccharomyces cerevisiae
Q54356797Improving recombinant eukaryotic membrane protein yields in Pichia pastoris: the importance of codon optimization and clone selection.
Q35061886In vitro evolution of ligands to the membrane protein caveolin
Q36876153Integral membrane proteins and bilayer proteomics
Q42219351Kinetics of small molecule interactions with membrane proteins in single cells measured with mechanical amplification
Q42059304Knowledge-based potential for positioning membrane-associated structures and assessing residue-specific energetic contributions
Q54249315Lactococcus lactis is an Efficient Expression System for Mammalian Membrane Proteins Involved in Liver Detoxification, CYP3A4, and MGST1.
Q38371294Lipidbook: a public repository for force-field parameters used in membrane simulations.
Q35187977Lipidic cubic phase technologies for membrane protein structural studies
Q30689354MP:PD--a data base of internal packing densities, internal packing defects and internal waters of helical membrane proteins
Q33507121MPEx: a tool for exploring membrane proteins
Q28750585MPlot--a server to analyze and visualize tertiary structure contacts and geometrical features of helical membrane proteins
Q42072255MemProtMD: Automated Insertion of Membrane Protein Structures into Explicit Lipid Membranes.
Q33890217MemPype: a pipeline for the annotation of eukaryotic membrane proteins
Q27661895Membrane domain structures of three classes of histidine kinase receptors by cell-free expression and rapid NMR analysis
Q30424545Membrane protein native state discrimination by implicit membrane models
Q30353155Membrane protein structure determination: back to the membrane.
Q26747197Membrane proteins: always an insoluble problem?
Q35515687Membrane topological structure of neutral system N/A amino acid transporter 4 (SNAT4) protein
Q51590304Microscopic Characterization of Membrane Transporter Function by In Silico Modeling and Simulation.
Q83393838Modulation of function in a minimalist heme-binding membrane protein
Q30157115Molecular mechanism for lateral lipid diffusion between the outer membrane external leaflet and a beta-barrel hydrocarbon ruler
Q58002437Multidimensional oriented solid-state NMR experiments enable the sequential assignment of uniformly 15N labeled integral membrane proteins in magnetically aligned lipid bilayers
Q37775257Multiple interests in structural models of DARC transmembrane protein.
Q42558856Multiscale simulations reveal conserved patterns of lipid interactions with aquaporins.
Q34024744N-glycosylation efficiency is determined by the distance to the C-terminus and the amino acid preceding an Asn-Ser-Thr sequon
Q30155502NMR structures of polytopic integral membrane proteins
Q36506228New functions for the ancient DedA membrane protein family
Q34086382Nonmicellar systems for solution NMR spectroscopy of membrane proteins
Q42943181Outer membrane protein F stabilised with minimal amphipol forms linear arrays and LPS-dependent 2D crystals.
Q46400255Overexpression and purification of integral membrane proteins in yeast
Q57805488Perspectives of solution NMR spectroscopy for structural and functional studies of integral membrane proteins
Q40673326Phylogeny of the Vitamin K 2,3-Epoxide Reductase (VKOR) Family and Evolutionary Relationship to the Disulfide Bond Formation Protein B (DsbB) Family
Q35497501Physiological response to membrane protein overexpression in E. coli
Q30396793Present and future of membrane protein structure determination by electron crystallography
Q41070663Probing Polytopic Membrane Protein-Substrate Interactions by Luminescence Resonance Energy Transfer
Q34575556Probing membrane protein unfolding with pulse proteolysis.
Q43843669Probing the contacts of a low-affinity substrate with a membrane-embedded transport protein using 1H-13C cross-polarisation magic-angle spinning solid-state NMR.
Q34249882Probing the spontaneous membrane insertion of a tail-anchored membrane protein by sum frequency generation spectroscopy
Q39492847Pulsed hydrogen/deuterium exchange mass spectrometry for time-resolved membrane protein folding studies
Q33739991Reduced voltage sensitivity in a K+-channel voltage sensor by electric field remodeling.
Q42550769Revisiting the folding kinetics of bacteriorhodopsin.
Q30375311Sequence-structure relationship study in all-α transmembrane proteins using an unsupervised learning approach.
Q37764644Single-spanning transmembrane domains in cell growth and cell-cell interactions: More than meets the eye?
Q42911823Site-directed mutagenesis combined with oxidative methionine labeling for probing structural transitions of a membrane protein by mass spectrometry
Q37871217Specificity of intramembrane protein-lipid interactions
Q44608235Stealth carriers for low-resolution structure determination of membrane proteins in solution
Q38065640Structural and functional insights into the cardiac Na⁺/H⁺ exchanger
Q33564924Structural fragment clustering reveals novel structural and functional motifs in alpha-helical transmembrane proteins
Q34276839Structural genomics plucks high-hanging membrane proteins
Q27658231Structure Determination and Improved Model of Plant Photosystem I
Q30152895Structure alignment of membrane proteins: Accuracy of available tools and a consensus strategy
Q47760302Structure-based statistical analysis of transmembrane helices
Q37739764T-cell antigen receptor (TCR) transmembrane peptides: A new paradigm for the treatment of autoimmune diseases
Q99551801TMEM206 is a potential prognostic marker of hepatocellular carcinoma
Q24609995TMPad: an integrated structural database for helix-packing folds in transmembrane proteins
Q30392295TMSEG: Novel prediction of transmembrane helices
Q33822322Tandem malonate-based glucosides (TMGs) for membrane protein structural studies
Q35073141Tat peptide-mediated soluble expression of the membrane protein LSECtin-CRD in Escherichia coli
Q24618269The 3D structures of VDAC represent a native conformation
Q57827804The Conformation of Bacteriorhodopsin Loops in Purple Membranes Resolved by Solid-State MAS NMR Spectroscopy
Q93003191The MemProtMD database: a resource for membrane-embedded protein structures and their lipid interactions
Q30371974The membrane- and soluble-protein helix-helix interactome: similar geometry via different interactions.
Q38270911The safety dance: biophysics of membrane protein folding and misfolding in a cellular context
Q34038896The transporter classification database
Q55651990Time-resolved structural studies of protein reaction dynamics: a smorgasbord of X-ray approaches.
Q36419886Top-down mass spectrometry: recent developments, applications and perspectives
Q26863116Topological mapping methods for α-helical bacterial membrane proteins--an update and a guide
Q35974649Topology based identification and comprehensive classification of four-transmembrane helix containing proteins (4TMs) in the human genome
Q34541053Toward a structure determination method for biomineral-associated protein using combined solid- state NMR and computational structure prediction
Q30397038Toward the estimation of the absolute quality of individual protein structure models
Q34606768Using Haloarcula marismortui bacteriorhodopsin as a fusion tag for enhancing and visible expression of integral membrane proteins in Escherichia coli
Q34106370VITAL NMR: using chemical shift derived secondary structure information for a limited set of amino acids to assess homology model accuracy.
Q39641796Validation of membrane protein topology models by oxidative labeling and mass spectrometry.
Q39171113Validation of the detergent micelle classification for membrane protein crystals and explanation of the Matthews Graph for soluble proteins
Q46602374Yeast-expressed human membrane protein aquaporin-1 yields excellent resolution of solid-state MAS NMR spectra.

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