A blueprint of ectoine metabolism from the genome of the industrial producer Halomonas elongata DSM 2581 T.

scientific article published on 16 September 2010

A blueprint of ectoine metabolism from the genome of the industrial producer Halomonas elongata DSM 2581 T. is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1111/J.1462-2920.2010.02336.X
P932PMC publication ID3187862
P698PubMed publication ID20849449
P5875ResearchGate publication ID46303687

P50authorDieter OesterheltQ1222570
Hans-Peter KlenkQ28037361
Harald SeitzQ52856323
Friedhelm PfeifferQ55175127
Hans J KunteQ57420584
Markus RamppQ33292367
P2093author name stringStephan C Schuster
Georg Lentzen
Alberto Marin-Sanguino
Karin Schwibbert
Irina Bagyan
Gabriele Heidrich
P2860cites workThe structure and biosynthesis of new tetrahydropyrimidine derivatives in actinomycin D producer Streptomyces parvulus. Use of 13C- and 15N-labeled L-glutamate and 13C and 15N NMR spectroscopyQ69925951
Regulation of nitrogen fixation genesQ70352808
Compatible solutes as protectants for zymogens against proteolysisQ79781646
A comprehensive structure-based alignment of prokaryotic and eukaryotic neurotransmitter/Na+ symporters (NSS) aids in the use of the LeuT structure to probe NSS structure and functionQ80035224
Evolution in the laboratory: The genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1Q22162489
Characterization of biosynthetic enzymes for ectoine as a compatible solute in a moderately halophilic eubacterium, Halomonas elongata.Q24516802
Osmotically regulated synthesis of the compatible solute ectoine in Bacillus pasteurii and related Bacillus spp.Q24535605
Genome sequencing in microfabricated high-density picolitre reactorsQ24544260
tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequenceQ24544402
Gapped BLAST and PSI-BLAST: a new generation of protein database search programsQ24545170
Bioenergetic aspects of halophilismQ24548540
MUSCLE: multiple sequence alignment with high accuracy and high throughputQ24613456
Enzyme-specific profiles for genome annotation: PRIAMQ24642072
eggNOG v2.0: extending the evolutionary genealogy of genes with enhanced non-supervised orthologous groups, species and functional annotationsQ24644077
Multiple sequence alignment with the Clustal series of programsQ24672842
MEGAN analysis of metagenomic dataQ24673516
RNAmmer: consistent and rapid annotation of ribosomal RNA genesQ24675768
Evidence for symmetric chromosomal inversions around the replication origin in bacteriaQ24791763
Versatile and open software for comparing large genomesQ24807126
PHYML Online--a web server for fast maximum likelihood-based phylogenetic inferenceQ24811999
Organic compatible solutes of halotolerant and halophilic microorganismsQ24815605
Structural insight into gene transcriptional regulation and effector binding by the Lrp/AsnC family.Q25257757
Examination of the Mechanism of Human Brain Aspartoacylase through the Binding of an Intermediate Analogue † , ‡Q27649917
1.55 A structure of the ectoine binding protein TeaA of the osmoregulated TRAP-transporter TeaABC from Halomonas elongataQ27651577
The three-dimensional structure of the nitrogen regulatory protein IIANtr from Escherichia coliQ27759306
Improved microbial gene identification with GLIMMERQ27860463
Consed: a graphical tool for sequence finishingQ27860740
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysisQ27860925
T-Coffee: A novel method for fast and accurate multiple sequence alignmentQ27860999
Ectoine and hydroxyectoine inhibit aggregation and neurotoxicity of Alzheimer's beta-amyloidQ28267119
Deduction of upstream sequences of Xanthomonas campestris flagellar genes responding to transcription activation by FleQ.Q29346677
Engineering hybrid genes without the use of restriction enzymes: gene splicing by overlap extensionQ29547330
Bayesian inference of phylogeny and its impact on evolutionary biologyQ29547502
CRITICA: coding region identification tool invoking comparative analysisQ29614364
Parallel Metropolis coupled Markov chain Monte Carlo for Bayesian phylogenetic inferenceQ29614994
Small mobilizable multi-purpose cloning vectors derived from the Escherichia coli plasmids pK18 and pK19: selection of defined deletions in the chromosome of Corynebacterium glutamicumQ29615259
The MIGenAS integrated bioinformatics toolkit for web-based sequence analysisQ30355521
Chromohalobacter salexigens sp. nov., a moderately halophilic species that includes Halomonas elongata DSM 3043 and ATCC 33174.Q30658021
Construction and characterization of an NaCl-sensitive mutant of Halomonas elongata impaired in ectoine biosynthesisQ43025283
Comparative study of the thermostabilizing properties of mannosylglycerate and other compatible solutes on model enzymesQ43030657
The substrate-binding protein TeaA of the osmoregulated ectoine transporter TeaABC from Halomonas elongata: purification and characterization of recombinant TeaA.Q43030704
Calorimetrically obtained information about the efficiency of ectoine synthesis from glucose in Halomonas elongataQ43649001
Engineering metabolism and product formation in Corynebacterium glutamicum by coordinated gene overexpressionQ44442843
Three pathways for trehalose metabolism in Corynebacterium glutamicum ATCC13032 and their significance in response to osmotic stressQ44531851
Osmo-regulation of bacterial transcription via poised RNA polymeraseQ44852694
Effects of naturally occurring osmolytes on protein stability and solubility: issues important in protein crystallizationQ45027560
Halomonas elongata, a New Genus and Species of Extremely Salt-Tolerant BacteriaQ45301004
Marinobacter hydrocarbonoclasticus Gauthier et al. 1992 and Marinobacter aquaeolei Nguyen et al. 1999 are heterotypic synonymsQ45316112
Taxonomic evaluation of the genera Ruegeria and Silicibacter: a proposal to transfer the genus Silicibacter Petursdottir and Kristjansson 1999 to the genus Ruegeria Uchino et al. 1999.Q45317613
The compatible solute ectoine protects against nanoparticle-induced neutrophilic lung inflammationQ46072877
Metabolic capabilities of Escherichia coli: I. synthesis of biosynthetic precursors and cofactors.Q47770730
Development of joint application strategies for two microbial gene findersQ48557438
Osmotically induced synthesis of the compatible solute hydroxyectoine is mediated by an evolutionarily conserved ectoine hydroxylase.Q50954707
Metabolic Engineering with power-law and linear-logarithmic systems.Q51853750
Model reduction and a priori kinetic parameter identifiability analysis using metabolome time series for metabolic reaction networks with linlog kinetics.Q51870870
Biotechnological Coproduction of Compatible Solutes and Polyhydroxyalkanoates using the Genus HalomonasQ58325189
Enzymatic mechanism of creatine amidinohydrolase as deduced from crystal structuresQ67666580
Yeast diversity in hypersaline habitats.Q30984814
ATV: display and manipulation of annotated phylogenetic treesQ30986224
Analysis of the cytosolic proteome of Halobacterium salinarum and its implication for genome annotation.Q31137369
Ectoine-induced proteins in Sinorhizobium meliloti include an Ectoine ABC-type transporter involved in osmoprotection and ectoine catabolismQ31145641
Genome information management and integrated data analysis with HaloLex.Q31161033
The Zn-peptidase superfamily: functional convergence after evolutionary divergenceQ31402036
Questionable 16S ribosomal RNA gene annotations are frequent in completed microbial genomesQ33329024
Engineering biosynthetic pathways: new routes to chiral amino acidsQ33840401
Purification and reconstitution of an osmosensor: transporter ProP of Escherichia coli senses and responds to osmotic shiftsQ33852610
Extreme halophiles synthesize betaine from glycine by methylationQ33909741
Salt-dependent properties of proteins from extremely halophilic bacteriaQ34068337
Microbial water stressQ34072453
The osmophobic effect: natural selection of a thermodynamic force in protein foldingQ34086607
Understanding the adaptation of Halobacterium species NRC-1 to its extreme environment through computational analysis of its genome sequenceQ34094195
Tripartite ATP-independent periplasmic transporters: application of a relational database for genome-wide analysis of transporter gene frequency and organizationQ34641096
Characterization of a functional bacterial homologue of sodium-dependent neurotransmitter transportersQ34648304
Osmoprotection of Escherichia coli by ectoine: uptake and accumulation characteristicsQ36115637
Osmoregulation in Escherichia coli by accumulation of organic osmolytes: betaines, glutamic acid, and trehaloseQ36415084
Extremolytes: Natural compounds from extremophiles for versatile applicationsQ36587672
Unravelling the adaptation responses to osmotic and temperature stress in Chromohalobacter salexigens, a bacterium with broad salinity toleranceQ37269673
Cohesion group approach for evolutionary analysis of aspartokinase, an enzyme that feeds a branched network of many biochemical pathways.Q37451536
New type of osmoregulated solute transporter identified in halophilic members of the bacteria domain: TRAP transporter TeaABC mediates uptake of ectoine and hydroxyectoine in Halomonas elongata DSM 2581(T).Q39679215
GenDB--an open source genome annotation system for prokaryote genomesQ39747829
Construction and use of a versatile set of broad-host-range cloning and expression vectors based on the RK2 repliconQ39801430
A natural tetrahydropyrimidine protects small bowel from cold ischemia and subsequent warm in vitro reperfusion injuryQ39966201
Evolutionary divergence and salinity-mediated selection in halophilic archaeaQ40024231
Ectoine alters subcellular localization of inclusions and reduces apoptotic cell death induced by the truncated Machado-Joseph disease gene product with an expanded polyglutamine stretchQ40378913
Functional expression of the ectoine hydroxylase gene (thpD) from Streptomyces chrysomallus in Halomonas elongataQ40833083
4-Chlorobenzoate uptake in Comamonas sp. strain DJ-12 is mediated by a tripartite ATP-independent periplasmic transporterQ41064088
Microbial life at high salt concentrations: phylogenetic and metabolic diversityQ41960176
Ectoine from halophilic microorganisms induces the expression of hsp70 and hsp70B' in human keratinocytes modulating the proinflammatory responseQ42484513
State-dependent conformations of the translocation pathway in the tyrosine transporter Tyt1, a novel neurotransmitter:sodium symporter from Fusobacterium nucleatum.Q42689431
Complex regulation of the synthesis of the compatible solute ectoine in the halophilic bacterium Chromohalobacter salexigens DSM 3043T.Q43016359
Ectoines as compatible solutes and carbon and energy sources for the halophilic bacterium Chromohalobacter salexigensQ43019284
1,4,5,6-Tetrahydro-2-methyl-4-pyrimidinecarboxylic acid. A novel cyclic amino acid from halophilic phototrophic bacteria of the genus EctothiorhodospiraQ43019393
Transposon mutagenesis in halophilic eubacteria: conjugal transfer and insertion of transposon Tn5 and Tn1732 in Halomonas elongataQ43022538
Growth phase-dependent switch in osmolyte strategy in a moderate halophile: ectoine is a minor osmolyte but major stationary phase solute in Halobacillus halophilusQ43023828
P4510describes a project that usesMUMmerQ6719063
P433issue8
P921main subjectHalomonas elongataQ25860313
P304page(s)1973-1994
P577publication date2010-09-16
P1433published inEnvironmental MicrobiologyQ15752447
P1476titleA blueprint of ectoine metabolism from the genome of the industrial producer Halomonas elongata DSM 2581 T
P478volume13