| scholarly article | Q13442814 |
| review article | Q7318358 |
| P50 | author | Eric Van Nostrand | Q79781519 |
| P2093 | author name string | Gene W Yeo | |
| Emily C Wheeler | |||
| P2860 | cites work | Analysis of CLIP and iCLIP methods for nucleotide-resolution studies of protein-RNA interactions | Q21184000 |
| HITS-CLIP: panoramic views of protein-RNA regulation in living cells | Q24594553 | ||
| iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution | Q24630078 | ||
| Transcriptome-wide identification of RNA-binding protein and microRNA target sites by PAR-CLIP | Q24630900 | ||
| FMRP stalls ribosomal translocation on mRNAs linked to synaptic function and autism | Q24631425 | ||
| HITS-CLIP yields genome-wide insights into brain alternative RNA processing | Q24648963 | ||
| Efficient biotinylation and single-step purification of tagged transcription factors in mammalian cells and transgenic mice | Q24670468 | ||
| RNA-binding proteins in neurodegeneration: Seq and you shall receive | Q27000416 | ||
| CLIP identifies Nova-regulated RNA networks in the brain | Q28184312 | ||
| Evidence for reassociation of RNA-binding proteins after cell lysis: implications for the interpretation of immunoprecipitation analyses | Q28283946 | ||
| 4-thiouridine inhibits rRNA synthesis and causes a nucleolar stress response | Q28298346 | ||
| Mapping Argonaute and conventional RNA-binding protein interactions with RNA at single-nucleotide resolution using HITS-CLIP and CIMS analysis | Q28305549 | ||
| Antibodypedia, a portal for sharing antibody and antigen validation data | Q31166222 | ||
| Crosslinking proteins to nucleic acids by ultraviolet laser irradiation | Q33324488 | ||
| Insights into snoRNA biogenesis and processing from PAR-CLIP of snoRNA core proteins and small RNA sequencing | Q33741838 | ||
| Experimental and Computational Considerations in the Study of RNA-Binding Protein-RNA Interactions | Q33923485 | ||
| RIP-Chip: the isolation and identification of mRNAs, microRNAs and protein components of ribonucleoprotein complexes from cell extracts. | Q34003299 | ||
| RNA-RNA interactions enable specific targeting of noncoding RNAs to nascent Pre-mRNAs and chromatin sites | Q34253195 | ||
| Programmable RNA Tracking in Live Cells with CRISPR/Cas9. | Q34676404 | ||
| Cross-linking, ligation, and sequencing of hybrids reveals RNA-RNA interactions in yeast | Q35049263 | ||
| Induction of polynucleotide-protein cross-linkages by ultraviolet irradiation. Peculiarities of the high-intensity laser pulse irradiation | Q35052332 | ||
| hiCLIP reveals the in vivo atlas of mRNA secondary structures recognized by Staufen 1. | Q35224643 | ||
| Identifying mRNA subsets in messenger ribonucleoprotein complexes by using cDNA arrays | Q35834254 | ||
| Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP). | Q35971227 | ||
| Association of Argonaute proteins and microRNAs can occur after cell lysis | Q36183557 | ||
| Widespread RNA binding by chromatin-associated proteins | Q36587843 | ||
| Resources for the Comprehensive Discovery of Functional RNA Elements | Q36820981 | ||
| The Landscape of microRNA Targeting in Prostate Cancer Defined by AGO-PAR-CLIP. | Q37009376 | ||
| Global analyses of UPF1 binding and function reveal expanded scope of nonsense-mediated mRNA decay | Q37207905 | ||
| TRIBE: Hijacking an RNA-Editing Enzyme to Identify Cell-Specific Targets of RNA-Binding Proteins | Q37263403 | ||
| Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges. | Q37570298 | ||
| RIPiT-Seq: a high-throughput approach for footprinting RNA:protein complexes. | Q37619861 | ||
| RNA-binding proteins in Mendelian disease. | Q38082164 | ||
| How cells get the message: dynamic assembly and function of mRNA-protein complexes | Q38088112 | ||
| UMI-tools: modeling sequencing errors in Unique Molecular Identifiers to improve quantification accuracy | Q38382209 | ||
| Splicing factor gene mutations in hematologic malignancies | Q39035441 | ||
| Affinity Purification of Protein Complexes Using TAP Tags | Q39070156 | ||
| Musashi RNA-Binding Proteins as Cancer Drivers and Novel Therapeutic Targets | Q39112430 | ||
| Quantifying RNA binding sites transcriptome-wide using DO-RIP-seq | Q39289526 | ||
| Examining the complexity of human RNA polymerase complexes using HaloTag technology coupled to label free quantitative proteomics. | Q39431834 | ||
| Tethered Function Assays as Tools to Elucidate the Molecular Roles of RNA-Binding Proteins | Q40721662 | ||
| irCLIP platform for efficient characterization of protein-RNA interactions | Q41090135 | ||
| Genome-wide location analysis by pull down of in vivo biotinylated transcription factors | Q41258817 | ||
| Photocross-linking of nucleic acids to associated proteins | Q41465976 | ||
| The Grand Challenge of Characterizing Ribonucleoprotein Networks | Q41881728 | ||
| Detection of double-stranded RNA-protein interactions by methylene blue-mediated photo-crosslinking | Q42185322 | ||
| TU-tagging: cell type-specific RNA isolation from intact complex tissues | Q42670329 | ||
| CRISPR/Cas9-mediated integration enables TAG-eCLIP of endogenously tagged RNA binding proteins | Q43447084 | ||
| Incorporation of 6-Thioguanosine and 4-Thiouridine into RNA. Application to Isolation of Newly Synthesised RNA by Affinity Chromatography | Q44264870 | ||
| An RNA map predicting Nova-dependent splicing regulation | Q47600767 | ||
| Transcriptome-wide Identification of RNA-binding Protein Binding Sites Using Photoactivatable-Ribonucleoside-Enhanced Crosslinking Immunoprecipitation (PAR-CLIP). | Q51075129 | ||
| A census of human RNA-binding proteins | Q58283908 | ||
| P275 | copyright license | Creative Commons Attribution-NonCommercial | Q6936496 |
| P433 | issue | 1 | |
| P921 | main subject | genetics | Q7162 |
| messenger RNA | Q188928 | ||
| regulation of gene expression | Q411391 | ||
| nucleoprotein | Q419245 | ||
| transport protein | Q2111029 | ||
| RNA sequencing | Q2542347 | ||
| biomedical investigative technique | Q66648976 | ||
| P577 | publication date | 2017-08-29 | |
| 2018-01-01 | |||
| P1433 | published in | Wiley interdisciplinary reviews. RNA | Q26853993 |
| P1476 | title | Advances and challenges in the detection of transcriptome-wide protein-RNA interactions | |
| P478 | volume | 9 |
| Q92836887 | An Overview of Methodologies in Studying lncRNAs in the High-Throughput Era: When Acronyms ATTACK! |
| Q100737307 | Analysis of RNA-protein networks with RNP-MaP defines functional hubs on RNA |
| Q92719740 | Approaches for measuring the dynamics of RNA-protein interactions |
| Q93222437 | Computational approaches for the analysis of RNA-protein interactions: A primer for biologists |
| Q57753511 | Coordinate regulation of alternative pre-mRNA splicing events by the human RNA chaperone proteins hnRNPA1 and DDX5 |
| Q89229475 | Global profiling of hnRNP A2/B1-RNA binding on chromatin highlights LncRNA interactions |
| Q88514976 | GoldCLIP: Gel-omitted Ligation-dependent CLIP |
| Q91751821 | GraphClust2: Annotation and discovery of structured RNAs with scalable and accessible integrative clustering |
| Q42369779 | Handshakes and Fights: The Regulatory Interplay of RNA-Binding Proteins. |
| Q90370422 | Identification of FMR1-regulated molecular networks in human neurodevelopment |
| Q57181835 | Identification of new high affinity targets for Roquin based on structural conservation |
| Q90133800 | Identification of proteins and miRNAs that specifically bind an mRNA in vivo |
| Q64917625 | Integrative transcriptomic analysis suggests new autoregulatory splicing events coupled with nonsense-mediated mRNA decay. |
| Q98513896 | Large-scale tethered function assays identify factors that regulate mRNA stability and translation |
| Q64902350 | Mapping transcriptome-wide protein-RNA interactions to elucidate RNA regulatory programs. |
| Q52370800 | Messenger RNA Life-Cycle in Cancer Cells: Emerging Role of Conventional and Non-Conventional RNA-Binding Proteins? |
| Q92082159 | Nucleoside analogs in the study of the epitranscriptome |
| Q99563032 | On the Way to Understanding the Interplay between the RNA Structure and Functions in Cells: A Genome-Wide Perspective |
| Q90348513 | Practical considerations on performing and analyzing CLIP-seq experiments to identify transcriptomic-wide RNA-protein interactions |
| Q58570662 | RBP-Maps enables robust generation of splicing regulatory maps |
| Q90268649 | RNA binding candidates for human ADAR3 from substrates of a gain of function mutant expressed in neuronal cells |
| Q47364474 | RNA regulons in cancer and inflammation. |
| Q92857020 | RNA-protein interactions: disorder, moonlighting and junk contribute to eukaryotic complexity |
| Q93089064 | RNAs and RNA-Binding Proteins in Immuno-Metabolic Homeostasis and Diseases |
| Q60938093 | Recent advances in functional genome analysis |
| Q92459626 | Regulation of Iron Storage by CsrA Supports Exponential Growth of Escherichia coli |
| Q93170123 | SliceIt: A genome-wide resource and visualization tool to design CRISPR/Cas9 screens for editing protein-RNA interaction sites in the human genome |
| Q90389890 | The structural basis for RNA selectivity by the IMP family of RNA-binding proteins |
| Q59354894 | Unconventional RNA-binding proteins step into the virus-host battlefront |
| Q58617432 | Unraveling 3'-end RNA uridylation at nucleotide resolution |
| Q91771235 | View from an mRNP: The Roles of SR Proteins in Assembly, Maturation and Turnover |
| Q90597084 | Widespread RNA editing dysregulation in brains from autistic individuals |
| Q89837769 | Zipcode Binding Protein 1 (ZBP1; IGF2BP1): A Model for Sequence-Specific RNA Regulation |
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