Benjamin Haibe-Kains

researcher

Benjamin Haibe-Kains is …
instance of (P31):
humanQ5

External links are
P2456DBLP author ID18/3992
P227GND ID1217869190
P496ORCID iD0000-0002-7684-0079
P3829Publons author ID1693461
P1053ResearcherIDD-3702-2011
P1153Scopus author ID23667678400
P214VIAF ID8578160062462635790000

P735given name???Q4926472
???Q4926472
P106occupationresearcherQ1650915
P21sex or gendermaleQ6581097

Reverse relations

maintained by (P126)
Q114076979PDATK
Q114077003PharmacoGx
Q114077553ToxicoGx
Q114077620Xeva
Q114076453genefu
Q114077511survcomp

author (P50)
Q358127114-IBP, a sigma1 receptor agonist, decreases the migration of human cancer cells, including glioblastoma cells, in vitro and sensitizes them in vitro and in vivo to cytotoxic insults of proapoptotic and proautophagic drugs
Q33352632A comparative study of survival models for breast cancer prognostication based on microarray data: does a single gene beat them all?
Q33861620A fuzzy gene expression-based computational approach improves breast cancer prognostication
Q35690609A genome-wide aberrant RNA splicing in patients with acute myeloid leukemia identifies novel potential disease markers and therapeutic targets
Q35534413A network model for angiogenesis in ovarian cancer
Q35769036A three-gene model to robustly identify breast cancer molecular subtypes
Q36344543ABC: a tool to identify SNVs causing allele-specific transcription factor binding from ChIP-Seq experiments
Q35156922APOBEC3B expression in breast cancer reflects cellular proliferation, while a deletion polymorphism is associated with immune activation
Q40661065Adenosine 2B Receptor Expression on Cancer Cells Promotes Metastasis
Q24644185Amplification of LAPTM4B and YWHAZ contributes to chemotherapy resistance and recurrence of breast cancer
Q33692066An imprinted non-coding genomic cluster at 14q32 defines clinically relevant molecular subtypes in osteosarcoma across multiple independent datasets
Q57660126Analysis of Array Data and Clinical Validation of Array-Based Assays
Q28732124Angiogenic mRNA and microRNA gene expression signature predicts a novel subtype of serous ovarian cancer
Q39734181Assessment of an RNA interference screen-derived mitotic and ceramide pathway metagene as a predictor of response to neoadjuvant paclitaxel for primary triple-negative breast cancer: a retrospective analysis of five clinical trials
Q28597117Assessment of pharmacogenomic agreement
Q48276812Author Correction: Gene isoforms as expression-based biomarkers predictive of drug response in vitro.
Q31122464BatchQC: interactive software for evaluating sample and batch effects in genomic data
Q57660183Biological Processes Associated with Breast Cancer Clinical Outcome Depend on the Molecular Subtypes
Q112298514Biological and therapeutic implications of a unique subtype of NPM1 mutated AML
Q36966923CD4⁺ follicular helper T cell infiltration predicts breast cancer survival
Q38835904CD73 is associated with poor prognosis in high-grade serous ovarian cancer
Q36991010CD73 promotes anthracycline resistance and poor prognosis in triple negative breast cancer
Q34466023CT-based radiomic signature predicts distant metastasis in lung adenocarcinoma
Q35655229Characterization and clinical evaluation of CD10+ stroma cells in the breast cancer microenvironment
Q36675500Characterization of Conserved Toxicogenomic Responses in Chemically Exposed Hepatocytes across Species and Platforms.
Q35610374Chromosomal instability as a prognostic marker in cervical cancer
Q57660150Classification Models for Breast Cancer Molecular Subtyping: What is the Best Candidate for a Translation into Clinic?
Q26859166Comparative meta-analysis of prognostic gene signatures for late-stage ovarian cancer
Q37039879Comparison and validation of genomic predictors for anticancer drug sensitivity
Q33362164Comparison of prognostic gene expression signatures for breast cancer
Q57660188Computational Intelligence in Clinical Oncology: Lessons Learned from an Analysis of a Clinical Study
Q57462218Consensus on Molecular Subtypes of High-Grade Serous Ovarian Carcinoma
Q57660064Consensus on Molecular Subtypes of Ovarian Cancer
Q33974305Consistent metagenes from cancer expression profiles yield agent specific predictors of chemotherapy response
Q49766826Corrigendum: Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach
Q93086929Creating reproducible pharmacogenomic analysis pipelines
Q49832760CrosstalkNet: A visualization tool for differential co-expression networks and communities
Q36038847DNA methylation profiling reveals a predominant immune component in breast cancers.
Q34542213DNA replication stress: a source of APOBEC3B expression in breast cancer
Q23760721Decoding tumour phenotype by noninvasive imaging using a quantitative radiomics approach
Q42510471Definition of clinically distinct molecular subtypes in estrogen receptor-positive breast carcinomas through genomic grade
Q92237808Dr.VAE: improving drug response prediction via modeling of drug perturbation effects
Q54535173Elucidating prognosis and biology of breast cancer arising in young women using gene expression profiling.
Q30405622Enhancing reproducibility in cancer drug screening: how do we move forward?
Q96431251Epigenetic switch-induced viral mimicry evasion in chemotherapy resistant breast cancer
Q37690018Estrogen receptor negative/progesterone receptor positive breast cancer is not a reproducible subtype
Q40006970Evidence of galectin-1 involvement in glioma chemoresistance
Q35453467Exploiting high-throughput cell line drug screening studies to identify candidate therapeutic agents in head and neck cancer
Q35667722Extensive rewiring of epithelial-stromal co-expression networks in breast cancer
Q34153290Functional and genetic analysis of the colon cancer network
Q37165859Galectin 1 proangiogenic and promigratory effects in the Hs683 oligodendroglioma model are partly mediated through the control of BEX2 expression
Q24652481Gene expression profiling identifies activated growth factor signaling in poor prognosis (Luminal-B) estrogen receptor positive breast cancer
Q37207766Gene expression profiling reveals differences in microenvironment interaction between patients with chronic lymphocytic leukemia expressing high versus low ZAP70 mRNA
Q42635307Gene isoforms as expression-based biomarkers predictive of drug response in vitro.
Q54516947Gene modules and response to neoadjuvant chemotherapy in breast cancer subtypes: a pooled analysis.
Q38264465Gene regulatory networks and their applications: understanding biological and medical problems in terms of networks
Q35630836GeneSigDB: a manually curated database and resource for analysis of gene expression signatures
Q40274876Genefu: an R/Bioconductor package for computation of gene expression-based signatures in breast cancer.
Q36171157Genome-wide gene expression profiling to predict resistance to anthracyclines in breast cancer patients
Q37278382Genomic grade index is associated with response to chemotherapy in patients with breast cancer
Q92821194IL6 Induces an IL22+ CD8+ T-cell Subset with Potent Antitumor Function
Q39024434Importance of collection in gene set enrichment analysis of drug response in cancer cell lines.
Q33501853Improvement of the clinical applicability of the Genomic Grade Index through a qRT-PCR test performed on frozen and formalin-fixed paraffin-embedded tissues
Q57660206In Reply
Q34541198Inconsistency in large pharmacogenomic studies
Q30791224Inference and validation of predictive gene networks from biomedical literature and gene expression data
Q38897002Integrative Cancer Pharmacogenomics to Infer Large-Scale Drug Taxonomy
Q92380366Integrative Pharmacogenomics Analysis of Patient-Derived Xenografts
Q39989272Knocking down galectin 1 in human hs683 glioblastoma cells impairs both angiogenesis and endoplasmic reticulum stress responses
Q34105361Long-term in vitro treatment of human glioblastoma cells with temozolomide increases resistance in vivo through up-regulation of GLUT transporter and aldo-keto reductase enzyme AKR1C expression
Q33588294Long-term temozolomide treatment induces marked amino metabolism modifications and an increase in TMZ sensitivity in Hs683 oligodendroglioma cells
Q33816920Loss of Pgc-1α expression in aging mouse muscle potentiates glucose intolerance and systemic inflammation
Q33697985Low CD10 mRNA expression identifies high-risk ductal carcinoma in situ (DCIS).
Q45993441Low residual proliferation after short-term letrozole therapy is an early predictive marker of response in high proliferative ER-positive breast cancer.
Q39858199MM2S: personalized diagnosis of medulloblastoma patients and model systems
Q57293727MYC Interacts with the G9a Histone Methyltransferase to Drive Transcriptional Repression and Tumorigenesis
Q35099027Medulloblastoma subgroups remain stable across primary and metastatic compartments
Q36955113Meta-analysis of gene expression profiles in breast cancer: toward a unified understanding of breast cancer subtyping and prognosis signatures
Q36998227MicroRNA paraffin-based studies in osteosarcoma reveal reproducible independent prognostic profiles at 14q32.
Q33769803Minimising immunohistochemical false negative ER classification using a complementary 23 gene expression signature of ER status
Q90316116Modeling Cellular Response in Large-Scale Radiogenomic Databases to Advance Precision Radiotherapy
Q36739364Modeling invasive breast cancer: growth factors propel progression of HER2-positive premalignant lesions
Q54473138Molecular profiling of CD3-CD4+ T cells from patients with the lymphocytic variant of hypereosinophilic syndrome reveals targeting of growth control pathways.
Q46579411Multifactorial approach to predicting resistance to anthracyclines
Q34083912Multiple-input multiple-output causal strategies for gene selection
Q33556923NOTCH2 and FLT3 gene mis-splicings are common events in patients with acute myeloid leukemia (AML): new potential targets in AML
Q41867119Network statistics of genetically-driven gene co-expression modules in mouse crosses
Q37297706Noncoding somatic and inherited single-nucleotide variants converge to promote ESR1 expression in breast cancer.
Q57660119Novel Effects of Chromosome Y on Cardiac Regulation, Chromatin Remodeling, and Neonatal Programming in Male Mice
Q46593271Nucleolus and c-Myc: potential targets of cardenolide-mediated antitumor activity
Q39177005Older adults with heart failure treated with carvedilol, bisoprolol, or metoprolol tartrate: risk of mortality
Q114612603Ontogeny and Vulnerabilities of Drug-Tolerant Persisters in HER2+ Breast Cancer
Q91150412Organoid Cultures as Preclinical Models of Non-Small Cell Lung Cancer
Q33933172PIK3CA mutations associated with gene signature of low mTORC1 signaling and better outcomes in estrogen receptor-positive breast cancer
Q38874298Personalized diagnosis of medulloblastoma subtypes across patients and model systems
Q112637653PharmacoDB 2.0: improving scalability and transparency of in vitro pharmacogenomics analysis
Q38812641PharmacoGx: an R package for analysis of large pharmacogenomic datasets.
Q33337206Predicting prognosis using molecular profiling in estrogen receptor-positive breast cancer treated with tamoxifen
Q39018410Predictive approaches for drug combination discovery in cancer
Q35631178Predictive networks: a flexible, open source, web application for integration and analysis of human gene networks
Q36629530Prognostic microRNAs modulate the RHO adhesion pathway: A potential therapeutic target in undifferentiated pleomorphic sarcomas
Q37690351Proliferation and estrogen signaling can distinguish patients at risk for early versus late relapse among estrogen receptor positive breast cancers
Q28596241Public data and open source tools for multi-assay genomic investigation of disease
Q57660210Quantification of ZAP70 mRNA in B Cells by Real-Time PCR Is a Powerful Prognostic Factor in Chronic Lymphocytic Leukemia
Q42737035Quantitative assessment and validation of network inference methods in bioinformatics
Q114612602REFLECTions on Combination Therapies Empowered by Data Sharing
Q36820193Rac-specific guanine nucleotide exchange factor DOCK1 is a critical regulator of HER2-mediated breast cancer metastasis
Q34488635Radiomic feature clusters and prognostic signatures specific for Lung and Head & Neck cancer
Q36638518RamiGO: an R/Bioconductor package providing an AmiGO visualize interface
Q41036297Relevance of different prior knowledge sources for inferring gene interaction networks
Q35206996Robust Radiomics feature quantification using semiautomatic volumetric segmentation
Q34568149Significance analysis of prognostic signatures
Q30742291Similarity network fusion for aggregating data types on a genomic scale
Q34639023Stem cell-like gene expression in ovarian cancer predicts type II subtype and prognosis
Q44811326Strong time dependence of the 76-gene prognostic signature for node-negative breast cancer patients in the TRANSBIG multicenter independent validation series
Q35829697Test set bias affects reproducibility of gene signatures
Q33477635The Gene expression Grade Index: a potential predictor of relapse for endocrine-treated breast cancer patients in the BIG 1-98 trial
Q37541316The gene regulatory network for breast cancer: integrated regulatory landscape of cancer hallmarks
Q97524044The mevalonate pathway is an actionable vulnerability of t(4;14)-positive multiple myeloma
Q57660139Time to move forward from “first-generation” prognostic gene signatures in early breast cancer
Q34897615Transfer of clinically relevant gene expression signatures in breast cancer: from Affymetrix microarray to Illumina RNA-Sequencing technology
Q100560289Transparency and reproducibility in artificial intelligence
Q36661715UNBS5162, a novel naphthalimide that decreases CXCL chemokine expression in experimental prostate cancers
Q38472582Untangling statistical and biological models to understand network inference: the need for a genomics network ontology
Q35950215Using shRNA experiments to validate gene regulatory networks
Q35606351ZNF143 provides sequence specificity to secure chromatin interactions at gene promoters
Q30611147curatedOvarianData: clinically annotated data for the ovarian cancer transcriptome
Q34793900mRMRe: an R package for parallelized mRMR ensemble feature selection
Q34922055microRNA-29c and microRNA-223 down-regulation has in vivo significance in chronic lymphocytic leukemia and improves disease risk stratification
Q35526651survcomp: an R/Bioconductor package for performance assessment and comparison of survival models

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