| scholarly article | Q13442814 |
| P2093 | author name string | Ileana M Cristea | |
| Todd M Greco | |||
| Benjamin A Diner | |||
| P2860 | cites work | Phosphorylation site mutations affect herpes simplex virus type 1 ICP0 function | Q37743081 |
| Virus-host protein interactions in RNA viruses | Q37787451 | ||
| Atomic force microscopy in imaging of viruses and virus-infected cells | Q37885610 | ||
| Physical analysis of virus particles using electrospray differential mobility analysis | Q37968793 | ||
| Analyzing protein-protein interaction networks | Q37990047 | ||
| Histone deacetylases in herpesvirus replication and virus-stimulated host defense | Q38117580 | ||
| GeneMANIA prediction server 2013 update | Q38488789 | ||
| Latency-associated degradation of the MRP1 drug transporter during latent human cytomegalovirus infection | Q39167516 | ||
| The conserved set of host proteins incorporated into HIV-1 virions suggests a common egress pathway in multiple cell types | Q39190259 | ||
| Herpes simplex virus 1 infection induces activation and subsequent inhibition of the IFI16 and NLRP3 inflammasomes | Q39191187 | ||
| Proteomics analysis of herpes simplex virus type 1-infected cells reveals dynamic changes of viral protein expression, ubiquitylation, and phosphorylation | Q39192558 | ||
| Identification of RNA-protein interaction networks involved in the norovirus life cycle | Q39288517 | ||
| EWI-2 association with α-actinin regulates T cell immune synapses and HIV viral infection. | Q39332714 | ||
| Proteomic analysis of HIV-1 Nef cellular binding partners reveals a role for exocyst complex proteins in mediating enhancement of intercellular nanotube formation | Q39358737 | ||
| Analysis of the interactions of viral and cellular factors with human cytomegalovirus lytic origin of replication, oriLyt | Q39413787 | ||
| Profiling of the kinome of cytomegalovirus-infected cells reveals the functional importance of host kinases Aurora A, ABL and AMPK. | Q39424035 | ||
| Herpes simplex virus 1 ICP4 forms complexes with TFIID and mediator in virus-infected cells | Q39568162 | ||
| Quantitative proteomics using SILAC coupled to LC-MS/MS reveals changes in the nucleolar proteome in influenza A virus-infected cells | Q39668683 | ||
| Host cell proteins interacting with the 3' end of TGEV coronavirus genome influence virus replication. | Q39828502 | ||
| Comprehensive characterization of extracellular herpes simplex virus type 1 virions | Q39966067 | ||
| Identification of proteins associated with murine cytomegalovirus virions | Q40162741 | ||
| Identification of cellular interaction partners of the influenza virus ribonucleoprotein complex and polymerase complex using proteomic-based approaches | Q40176125 | ||
| Tracking and elucidating alphavirus-host protein interactions | Q40245922 | ||
| The human cytomegalovirus UL11 protein interacts with the receptor tyrosine phosphatase CD45, resulting in functional paralysis of T cells | Q21090492 | ||
| Involvement of the TIP60 histone acetylase complex in DNA repair and apoptosis | Q24290159 | ||
| The functional interactome landscape of the human histone deacetylase family | Q24294822 | ||
| Global landscape of HIV-human protein complexes | Q24300336 | ||
| IFI16 is an innate immune sensor for intracellular DNA | Q24301720 | ||
| IFI16 acts as a nuclear pathogen sensor to induce the inflammasome in response to Kaposi Sarcoma-associated herpesvirus infection | Q24302985 | ||
| Mass-spectrometric identification and relative quantification of N-linked cell surface glycoproteins | Q24313398 | ||
| Defining the human deubiquitinating enzyme interaction landscape | Q24315885 | ||
| Proteomics of herpes simplex virus infected cell protein 27: association with translation initiation factors | Q24317336 | ||
| Human cytomegalovirus tegument protein pUL83 inhibits IFI16-mediated DNA sensing for immune evasion | Q24339602 | ||
| The Reactome pathway knowledgebase | Q24567743 | ||
| ViralZone: a knowledge resource to understand virus diversity | Q24608854 | ||
| Modification-specific proteomics: strategies for characterization of post-translational modifications using enrichment techniques | Q24628360 | ||
| What is the total number of protein molecules per cell volume? A call to rethink some published values | Q26782007 | ||
| Formation of nsP3-Specific Protein Complexes during Sindbis Virus Replication | Q27473143 | ||
| Thermodynamic origins of protein folding, allostery, and capsid formation in the human hepatitis B virus core protein | Q27678911 | ||
| Lysine acetylation targets protein complexes and co-regulates major cellular functions | Q27860589 | ||
| A generic protein purification method for protein complex characterization and proteome exploration | Q27861087 | ||
| Decoding human cytomegalovirus | Q28279933 | ||
| Human cytomegalovirus UL29/28 protein interacts with components of the NuRD complex which promote accumulation of immediate-early RNA | Q28474716 | ||
| Computational and informatics strategies for identification of specific protein interaction partners in affinity purification mass spectrometry experiments | Q28681948 | ||
| The IntAct molecular interaction database in 2010 | Q28749230 | ||
| Kinesin-3 mediates axonal sorting and directional transport of alphaherpesvirus particles in neurons | Q28771328 | ||
| The AIM2 inflammasome is essential for host defense against cytosolic bacteria and DNA viruses | Q29614469 | ||
| STRING v9.1: protein-protein interaction networks, with increased coverage and integration | Q29614691 | ||
| Host factors associated with the Sindbis virus RNA-dependent RNA polymerase: role for G3BP1 and G3BP2 in virus replication | Q30156902 | ||
| A proteomic perspective of inbuilt viral protein regulation: pUL46 tegument protein is targeted for degradation by ICP0 during herpes simplex virus type 1 infection | Q30557071 | ||
| Hydrogen-deuterium exchange as a probe of folding and assembly in viral capsids | Q30658814 | ||
| Subproteomic analysis of the cellular proteins associated with the 3' untranslated region of the hepatitis C virus genome in human liver cells | Q40255676 | ||
| Proteomic analysis of human immunodeficiency virus using liquid chromatography/tandem mass spectrometry effectively distinguishes specific incorporated host proteins | Q40309583 | ||
| Identification of cellular factors associated with the 3'-nontranslated region of the hepatitis C virus genome | Q40311724 | ||
| Expression profiling of lymphocyte plasma membrane proteins | Q40624052 | ||
| Virion-associated cholesterol is critical for the maintenance of HIV-1 structure and infectivity. | Q40688664 | ||
| A Controlled Trial of Ganciclovir to Prevent Cytomegalovirus Disease after Heart Transplantation | Q40734820 | ||
| Global secretome characterization of herpes simplex virus 1-infected human primary macrophages. | Q41167001 | ||
| Identification of structural proteins of channel catfish virus by mass spectrometry | Q41372561 | ||
| Using ion mobility spectrometry-mass spectrometry to decipher the conformational and assembly characteristics of the hepatitis B capsid protein | Q41837448 | ||
| Discovery of host-viral protein complexes during infection | Q41848211 | ||
| Identification of host proteins associated with HIV-1 preintegration complexes isolated from infected CD4+ cells | Q42162020 | ||
| LRP1 controls intracellular cholesterol storage and fatty acid synthesis through modulation of Wnt signaling | Q42192571 | ||
| Hydrogen/Deuterium Exchange Analysis of HIV-1 Capsid Assembly and Maturation | Q42361670 | ||
| I-DIRT, a general method for distinguishing between specific and nonspecific protein interactions | Q42670112 | ||
| Kaposi's sarcoma-associated herpesvirus utilizes an actin polymerization-dependent macropinocytic pathway to enter human dermal microvascular endothelial and human umbilical vein endothelial cells | Q42733497 | ||
| Proteomics analysis of the nucleolus in adenovirus-infected cells | Q42935025 | ||
| Differential effects of selective HDAC inhibitors on macrophage inflammatory responses to the Toll-like receptor 4 agonist LPS. | Q43143715 | ||
| Identification of host factors involved in coronavirus replication by quantitative proteomics analysis | Q43578229 | ||
| Probing the biophysical interplay between a viral genome and its capsid | Q44031178 | ||
| Histone deacetylase inhibitors impair innate immune responses to Toll-like receptor agonists and to infection | Q44166565 | ||
| Interrogating viral capsid assembly with ion mobility-mass spectrometry | Q44272683 | ||
| Global analysis of modifications of the human BK virus structural proteins by LC-MS/MS. | Q45376889 | ||
| Diminished matrix metalloproteinase 9 secretion in human immunodeficiency virus-infected mononuclear phagocytes: modulation of innate immunity and implications for neurological disease | Q45540265 | ||
| Histone deacetylase inhibitors impair antibacterial defenses of macrophages. | Q54352898 | ||
| Mouse cytomegalovirus egress protein pM50 interacts with cellular endophilin-A2 | Q57824375 | ||
| Cytomegalovirus infection aggravates atherogenesis in apoE knockout mice by both local and systemic immune activation | Q75317882 | ||
| Mouse cytomegalovirus antigenic immune stimulation is sufficient to aggravate atherosclerosis in hypercholesterolemic mice | Q81818757 | ||
| Identification of proteins in human cytomegalovirus (HCMV) particles: the HCMV proteome | Q37568012 | ||
| Proteins of purified Epstein-Barr virus | Q37621844 | ||
| Large-scale production and structural and biophysical characterizations of the human hepatitis B virus polymerase | Q37644005 | ||
| Proteolytic 18O labeling for comparative proteomics: model studies with two serotypes of adenovirus | Q30691672 | ||
| Pox proteomics: mass spectrometry analysis and identification of Vaccinia virion proteins. | Q30809790 | ||
| Proteomics of herpes simplex virus replication compartments: association of cellular DNA replication, repair, recombination, and chromatin remodeling proteins with ICP8. | Q33202888 | ||
| Proteomic and biochemical analysis of purified human immunodeficiency virus type 1 produced from infected monocyte-derived macrophages | Q33255758 | ||
| Identifying the membrane proteome of HIV-1 latently infected cells | Q33269741 | ||
| Identification of human cytomegalovirus UL84 virus- and cell-encoded binding partners by using proteomics analysis | Q33303826 | ||
| Cellular proteins in influenza virus particles | Q33340974 | ||
| Hepatitis B virus core interacts with the host cell nucleolar protein, nucleophosmin 1. | Q33529185 | ||
| Identification of essential filovirion-associated host factors by serial proteomic analysis and RNAi screen | Q33655087 | ||
| SAINT: probabilistic scoring of affinity purification-mass spectrometry data | Q33763365 | ||
| A targeted spatial-temporal proteomics approach implicates multiple cellular trafficking pathways in human cytomegalovirus virion maturation | Q33854974 | ||
| Quantitative subcellular proteome and secretome profiling of influenza A virus-infected human primary macrophages | Q33904023 | ||
| Human cytomegalovirus pUL83 stimulates activity of the viral immediate-early promoter through its interaction with the cellular IFI16 protein. | Q33964039 | ||
| GPS-Prot: a web-based visualization platform for integrating host-pathogen interaction data | Q33967454 | ||
| The cancer cell secretome: a good source for discovering biomarkers? | Q34022076 | ||
| Norwalk virus assembly and stability monitored by mass spectrometry. | Q34121907 | ||
| Protein analysis of purified respiratory syncytial virus particles reveals an important role for heat shock protein 90 in virus particle assembly | Q34122163 | ||
| Chemistry-based functional proteomics reveals novel members of the deubiquitinating enzyme family | Q34156341 | ||
| Inactivation and disassembly of the anaphase-promoting complex during human cytomegalovirus infection is associated with degradation of the APC5 and APC4 subunits and does not require UL97-mediated phosphorylation of Cdh1. | Q34178268 | ||
| Polyunsaturated liposomes are antiviral against hepatitis B and C viruses and HIV by decreasing cholesterol levels in infected cells | Q34182524 | ||
| Vif hijacks CBF-β to degrade APOBEC3G and promote HIV-1 infection | Q34242229 | ||
| Selected reaction monitoring-based proteomics: workflows, potential, pitfalls and future directions | Q34279143 | ||
| Nuclear IFI16 induction of IRF-3 signaling during herpesviral infection and degradation of IFI16 by the viral ICP0 protein | Q34303188 | ||
| Beyond hairballs: The use of quantitative mass spectrometry data to understand protein-protein interactions | Q34308163 | ||
| Quantitative proteomic analysis of A549 cells infected with human respiratory syncytial virus | Q34320755 | ||
| Ebola virus VP40 drives the formation of virus-like filamentous particles along with GP | Q34338585 | ||
| Role for human immunodeficiency virus type 1 membrane cholesterol in viral internalization | Q34348930 | ||
| Vaccinia virus proteome: identification of proteins in vaccinia virus intracellular mature virion particles | Q34434835 | ||
| Fluorescent proteins as proteomic probes. | Q34450046 | ||
| Analysis of virion-incorporated host proteins required for herpes simplex virus type 1 infection through a RNA interference screen | Q34542419 | ||
| VirusMINT: a viral protein interaction database | Q34599520 | ||
| TULA proteins bind to ABCE-1, a host factor of HIV-1 assembly, and inhibit HIV-1 biogenesis in a UBA-dependent fashion. | Q34713979 | ||
| Post translational modifications in adenovirus type 2. | Q35037665 | ||
| A proteomic study of TAR-RNA binding protein (TRBP)-associated factors | Q35073971 | ||
| Proteomic characterization of pseudorabies virus extracellular virions | Q35077562 | ||
| Proteomic characterization of murid herpesvirus 4 extracellular virions | Q35080693 | ||
| Building protein-protein interaction networks with proteomics and informatics tools. | Q35084958 | ||
| Human kinome profiling identifies a requirement for AMP-activated protein kinase during human cytomegalovirus infection | Q35778951 | ||
| The 3A protein from multiple picornaviruses utilizes the golgi adaptor protein ACBD3 to recruit PI4KIIIβ. | Q35826912 | ||
| Association of vaccinia virus fusion regulatory proteins with the multicomponent entry/fusion complex | Q35857238 | ||
| Host cell interactome of HIV-1 Rev includes RNA helicases involved in multiple facets of virus production | Q35878786 | ||
| Kaposi's sarcoma-associated herpesvirus interacts with EphrinA2 receptor to amplify signaling essential for productive infection | Q35983048 | ||
| Investigating the human immunodeficiency virus type 1-infected monocyte-derived macrophage secretome | Q36012137 | ||
| Acetylation modulates cellular distribution and DNA sensing ability of interferon-inducible protein IFI16. | Q36068800 | ||
| Cross-linking measurements of the Potato leafroll virus reveal protein interaction topologies required for virion stability, aphid transmission, and virus-plant interactions | Q36109023 | ||
| Increased expression of LDL receptor-related protein 1 during human cytomegalovirus infection reduces virion cholesterol and infectivity | Q36119693 | ||
| Evidence for a genetic and physical interaction between nonstructural proteins NS1 and NS4B that modulates replication of West Nile virus | Q36155471 | ||
| Mapping the phosphoproteome of influenza A and B viruses by mass spectrometry | Q36384462 | ||
| Probabilistic assembly of human protein interaction networks from label-free quantitative proteomics | Q36446314 | ||
| Structure of complex viruses and virus-infected cells by electron cryo tomography | Q36531129 | ||
| Ebola virus matrix protein VP40 uses the COPII transport system for its intracellular transport | Q36580850 | ||
| Activity-based ubiquitin-specific protease (USP) profiling of virus-infected and malignant human cells | Q36601348 | ||
| Human cytomegalovirus secretome contains factors that induce angiogenesis and wound healing | Q36747994 | ||
| Comparative proteomics of human monkeypox and vaccinia intracellular mature and extracellular enveloped virions | Q36839627 | ||
| Characterization of phosphoproteins and protein kinase activity of virions, noninfectious enveloped particles, and dense bodies of human cytomegalovirus | Q36867674 | ||
| Proteomics-based methods for discovery, quantification, and validation of protein-protein interactions | Q36884872 | ||
| Affinity capture and identification of host cell factors associated with hepatitis C virus (+) strand subgenomic RNA | Q36910780 | ||
| The product of the Herpes simplex virus 1 UL7 gene interacts with a mitochondrial protein, adenine nucleotide translocator 2 | Q36958883 | ||
| Thiouracil cross-linking mass spectrometry: a cell-based method to identify host factors involved in viral amplification | Q37036682 | ||
| Role for Influenza Virus Envelope Cholesterol in Virus Entry and Infection | Q37059788 | ||
| The cellular interactome of the coronavirus infectious bronchitis virus nucleocapsid protein and functional implications for virus biology | Q37123444 | ||
| Glycoproteins gE and gI are required for efficient KIF1A-dependent anterograde axonal transport of alphaherpesvirus particles in neurons. | Q37123566 | ||
| Identification of replication-competent HSV-1 Cgal+ strain signaling targets in human hepatoma cells by functional organelle proteomics. | Q37154463 | ||
| Mechanisms of cytomegalovirus-accelerated vascular disease: induction of paracrine factors that promote angiogenesis and wound healing | Q37220021 | ||
| Interferons: signaling, antiviral and viral evasion | Q37342272 | ||
| IFI16 senses DNA forms of the lentiviral replication cycle and controls HIV-1 replication. | Q37353206 | ||
| Human cytomegalovirus protein UL38 inhibits host cell stress responses by antagonizing the tuberous sclerosis protein complex | Q37380692 | ||
| P433 | issue | 1 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | virology | Q7215 |
| P304 | page(s) | 581-604 | |
| P577 | publication date | 2014-07-14 | |
| P1433 | published in | Annual Review of Virology | Q19962702 |
| P1476 | title | The Impact of Mass Spectrometry-Based Proteomics on Fundamental Discoveries in Virology | |
| P478 | volume | 1 |
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| Q100694024 | A high-stringency blueprint of the human proteome |
| Q38366522 | A proteomics perspective on viral DNA sensors in host defense and viral immune evasion mechanisms. |
| Q28081427 | Bioinformatics and HIV latency |
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| Q35894459 | Identification of mumps virus protein and lipid composition by mass spectrometry. |
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| Q36535838 | Investigation of the HIV-1 matrix interactome during virus replication |
| Q57460644 | Mass spectrometry-based investigation of measles and mumps virus proteome |
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