Molecular genetic analysis and evolution of begomoviruses and betasatellites causing yellow mosaic disease of bhendi

scientific article published on 28 November 2016

Molecular genetic analysis and evolution of begomoviruses and betasatellites causing yellow mosaic disease of bhendi is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1007/S11262-016-1414-Y
P698PubMed publication ID27891562

P2093author name stringA K Singh
S Chakraborty
H C Prasanna
R Vinoth Kumar
G K Garg
D Ragunathan
P2860cites workMUSCLE: a multiple sequence alignment method with reduced time and space complexityQ21284290
Bayesian phylogenetics with BEAUti and the BEAST 1.7Q24286945
MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony MethodsQ27860929
DnaSP v5: a software for comprehensive analysis of DNA polymorphism dataQ28131837
Microsatellites: simple sequences with complex evolutionQ28262642
Not so different after all: a comparison of methods for detecting amino acid sites under selectionQ28306719
The genetical structure of populationsQ29616058
Analyzing the mosaic structure of genesQ29616749
Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biologyQ29617583
RDP3: a flexible and fast computer program for analyzing recombinationQ29617754
Sister-scanning: a Monte Carlo procedure for assessing signals in recombinant sequencesQ33389642
Identification of a novel circular single-stranded DNA associated with cotton leaf curl disease in Pakistan.Q33864546
Validation of high rates of nucleotide substitution in geminiviruses: phylogenetic evidence from East African cassava mosaic virusesQ33878827
Evaluation of methods for detecting recombination from DNA sequences: computer simulationsQ33950030
Diversity and phylogeography of Begomovirus-associated beta satellites of Okra in IndiaQ34107696
SDT: a virus classification tool based on pairwise sequence alignment and identity calculationQ34258492
Molecular characterization of tomato leaf curl China virus, infecting tomato plants in China, and functional analyses of its associated betasatelliteQ35077231
An exact nonparametric method for inferring mosaic structure in sequence tripletsQ35846218
Simple sequence repeats in prokaryotic genomesQ35850225
Phylogenetic evidence for rapid rates of molecular evolution in the single-stranded DNA begomovirus tomato yellow leaf curl virusQ36424478
Simple sequence repeats as advantageous mutators in evolutionQ36432969
Brazilian begomovirus populations are highly recombinant, rapidly evolving, and segregated based on geographical locationQ36827344
Association of a recombinant Cotton leaf curl Bangalore virus with yellow vein and leaf curl disease of okra in IndiaQ37201733
Evolution of geminiviruses and their satellitesQ37508251
Geminiviruses: masters at redirecting and reprogramming plant processesQ38150077
Recombination as a motor of host switches and virus emergence: geminiviruses as case studiesQ38307762
Revision of Begomovirus taxonomy based on pairwise sequence comparisons.Q38922913
High frequencies of short frameshifts in poly-CA/TG tandem repeats borne by bacteriophage M13 in Escherichia coli K-12.Q40388905
Complexity of begomovirus and betasatellite populations associated with chilli leaf curl disease in India.Q40649718
The contribution of translesion synthesis polymerases on geminiviral replicationQ41072565
Genomic characterization of EmsB microsatellite loci in Echinococcus multilocularis.Q41108798
Molecular diversity of Chickpea chlorotic dwarf virus in Sudan: high rates of intra-species recombination - a driving force in the emergence of new strainsQ41637410
Widely conserved recombination patterns among single-stranded DNA viruses.Q42036258
Potential linkage between compound microsatellites and recombination in geminiviruses: Evidence from comparative analysisQ42152002
Contrasting genetic structure between two begomoviruses infecting the same leguminous hosts.Q42205986
Establishment of three new genera in the family Geminiviridae: Becurtovirus, Eragrovirus and TurncurtovirusQ42229655
Host-specific adaptation of diverse betasatellites associated with distinct Indian tomato-infecting begomovirusesQ42245611
Molecular characterization of Chilli leaf curl virus and satellite molecules associated with leaf curl disease of Amaranthus spp.Q42247207
Genome-wide scan for analysis of simple and imperfect microsatellites in diverse carlaviruses.Q42252050
Sites under positive selection modulate the RNA silencing suppressor activity of rice yellow mottle virus movement protein P1.Q42264872
A new statistic for detecting genetic differentiation.Q42552289
Exchange of three amino acids in the coat protein results in efficient whitefly transmission of a nontransmissible Abutilon mosaic virus isolateQ43908553
ESTIMATING F-STATISTICS FOR THE ANALYSIS OF POPULATION STRUCTURE.Q44872734
Differential roles of C4 and betaC1 in mediating suppression of post-transcriptional gene silencing: evidence for transactivation by the C2 of Bhendi yellow vein mosaic virus, a monopartite begomovirusQ44951529
Watermelon chlorotic stunt virus from the Sudan and Iran: Sequence Comparisons and Identification of a Whitefly-Transmission DeterminantQ45389354
Roles and interactions of begomoviruses and satellite DNAs associated with okra leaf curl disease in Mali, West AfricaQ46070896
A statistical test for detecting geographic subdivisionQ46747673
RDP: detection of recombination amongst aligned sequencesQ46776083
IMEx: Imperfect Microsatellite Extractor.Q48408506
Recommendations for the classification and nomenclature of the DNA-beta satellites of begomovirusesQ48685919
Protein-protein interactions and nuclear trafficking of coat protein and betaC1 protein associated with Bhendi yellow vein mosaic disease.Q50717787
Universal primers for the PCR-mediated amplification of DNA beta: a molecule associated with some monopartite begomoviruses.Q52595299
Occurrence and analysis of imperfect microsatellites in diverse potyvirus genomes.Q54314773
A Modified Bootscan Algorithm for Automated Identification of Recombinant Sequences and Recombination BreakpointsQ56878359
The Relationship Between Microsatellite Polymorphism and Recombination Hot Spots in the Human GenomeQ56929249
Possible emergence of new geminiviruses by frequent recombinationQ73278372
High-resolution mapping of crossovers in human sperm defines a minisatellite-associated recombination hotspotQ77231600
Bhendi yellow vein mosaic disease in India is caused by association of a DNA Beta satellite with a begomovirusQ78944249
P433issue2
P304page(s)275-285
P577publication date2016-11-28
P1433published inVirus GenesQ15749213
P1476titleMolecular genetic analysis and evolution of begomoviruses and betasatellites causing yellow mosaic disease of bhendi
P478volume53

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cites work (P2860)
Q64069339Diversity and recombination analysis of Cotton leaf curl Multan virus: a highly emerging begomovirus in northern India
Q92387217Multifunctional roles of geminivirus encoded replication initiator protein
Q41933004Tomato Leaf Curl New Delhi Virus: An Emerging Virus Complex Threatening Vegetable and Fiber Crops

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