Identification of an extradiol dioxygenase involved in tetralin biodegradation: gene sequence analysis and purification and characterization of the gene product

scientific article

Identification of an extradiol dioxygenase involved in tetralin biodegradation: gene sequence analysis and purification and characterization of the gene product is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1128/JB.182.3.789-795.2000
P8608Fatcat IDrelease_n557ghtcx5fopfer2hvxgo7ihm
P932PMC publication ID94344
P698PubMed publication ID10633115

P50authorEduardo SanteroQ38801440
P2093author name stringS R Kaschabek
W Reineke
E Andújar
M J Hernáez
P2860cites workConstruction of a 3-chlorobiphenyl-utilizing recombinant from an intergeneric matingQ39892365
Metabolism of tetralin (1,2,3,4-tetrahydronaphthalene) in Corynebacterium sp. strain C125.Q39917524
Effects of the membrane action of tetralin on the functional and structural properties of artificial and bacterial membranesQ39934013
3,4-Dihydroxyphenylacetate 2,3-dioxygenase from Klebsiella pneumoniae, a Mg(2+)-containing dioxygenase involved in aromatic catabolismQ42828437
Cloning and nucleotide sequence of the 2,3-dihydroxybiphenyl dioxygenase gene from the PCB-degrading strain of Pseudomonas paucimobilis Q1.Q45298493
Bacteria which attack petroleum hydrocarbons in a saline medium.Q45936609
Bacterial aromatic ring-cleavage enzymes are classified into two different gene families.Q48287182
Manganese(II) Active Site Mutants of 3,4-Dihydroxyphenylacetate 2,3-Dioxygenase fromArthrobacter globiformisStrain CM-2†Q57603650
New Pathways in the Oxidative Metabolism of Aromatic Compounds by Micro-OrganismsQ59050207
Metabolism of naphthalene by the biphenyl-degrading bacterium Pseudomonas paucimobilis Q1Q67528773
Isolation and characterization of a 3-chlorobenzoate degrading pseudomonadQ69813539
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choiceQ24286950
Gapped BLAST and PSI-BLAST: a new generation of protein database search programsQ24545170
Naphthalene metabolism by pseudomonads: purification and properties of 1,2-dihydroxynaphthalene oxygenaseQ24603886
Purification and characterization of a 1,2-dihydroxynaphthalene dioxygenase from a bacterium that degrades naphthalenesulfonic acidsQ24676866
Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4Q25938983
A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye bindingQ25938984
The neighbor-joining method: a new method for reconstructing phylogenetic treesQ25939010
Crystal structure of the biphenyl-cleaving extradiol dioxygenase from a PCB-degrading pseudomonadQ27729302
Three-dimensional structures of free form and two substrate complexes of an extradiol ring-cleavage type dioxygenase, the BphC enzyme from Pseudomonas sp. strain KKS102Q27732711
Studies on transformation of Escherichia coli with plasmidsQ27860598
Rapid and efficient site-specific mutagenesis without phenotypic selectionQ27860608
Interactions of cyclic hydrocarbons with biological membranesQ28250728
Distal cleavage of 3-chlorocatechol by an extradiol dioxygenase to 3-chloro-2-hydroxymuconic semialdehydeQ28379535
Cloning of an organic solvent-resistance gene in Escherichia coli: the unexpected role of alkylhydroperoxide reductaseQ28776037
Complete sequence of a 184-kilobase catabolic plasmid from Sphingomonas aromaticivorans F199.Q33853412
Functional and evolutionary relationships among diverse oxygenasesQ33972461
Identification of an alternative 2,3-dihydroxybiphenyl 1,2-dioxygenase in Rhodococcus sp. strain RHA1 and cloning of the geneQ35192654
Molecular and biochemical characterization of two meta-cleavage dioxygenases involved in biphenyl and m-xylene degradation by Beijerinckia sp. strain B1.Q35586827
Evolutionary relationships among extradiol dioxygenasesQ35614251
Cloning of bacterial genes specifying degradation of 4-chlorobiphenyl from Pseudomonas putida OU83.Q35734116
Three different 2,3-dihydroxybiphenyl-1,2-dioxygenase genes in the gram-positive polychlorobiphenyl-degrading bacterium Rhodococcus globerulus P6.Q36103584
Genetic analysis of biodegradation of tetralin by a Sphingomonas strain.Q39481438
Characterization of a 2,3-dihydroxybiphenyl dioxygenase from the naphthalenesulfonate-degrading bacterium strain BN6Q39838730
Mechanism of coordinated synthesis of the antagonistic regulatory proteins NifL and NifA of Klebsiella pneumoniaeQ39843598
P433issue3
P407language of work or nameEnglishQ1860
P921main subjectbiodegradationQ696715
P304page(s)789-795
P577publication date2000-02-01
P1433published inJournal of BacteriologyQ478419
P1476titleIdentification of an extradiol dioxygenase involved in tetralin biodegradation: gene sequence analysis and purification and characterization of the gene product
P478volume182

Reverse relations

cites work (P2860)
Q91826423Biodegradation of Tetralin: Genomics, Gene Function and Regulation
Q41962933Combination of degradation pathways for naphthalene utilization in Rhodococcus sp. strain TFB.
Q28658110Complete sequencing of Novosphingobium sp. PP1Y reveals a biotechnologically meaningful metabolic pattern
Q35599122Differential degradation of bicyclics with aromatic and alicyclic rings by Rhodococcus sp. strain DK17.
Q35929020Functional Metagenomics of a Biostimulated Petroleum-Contaminated Soil Reveals an Extraordinary Diversity of Extradiol Dioxygenases.
Q40271635Genetic dissection of independent and cooperative transcriptional activation by the LysR-type activator ThnR at close divergent promoters
Q33344760High aromatic ring-cleavage diversity in birch rhizosphere: PAH treatment-specific changes of I.E.3 group extradiol dioxygenases and 16S rRNA bacterial communities in soil
Q39734838Identification and functional characterization of Sphingomonas macrogolitabida strain TFA genes involved in the first two steps of the tetralin catabolic pathway
Q39648820Identification of a hydratase and a class II aldolase involved in biodegradation of the organic solvent tetralin
Q39585764Identification of a serine hydrolase which cleaves the alicyclic ring of tetralin.
Q42621272Integrated response to inducers by communication between a catabolic pathway and its regulatory system
Q33477962Metagenomics reveals diversity and abundance of meta-cleavage pathways in microbial communities from soil highly contaminated with jet fuel under air-sparging bioremediation
Q41859187Molecular and biochemical characterization of the tetralin degradation pathway in Rhodococcus sp. strain TFB
Q28776689Molecular characterization and substrate preference of a polycyclic aromatic hydrocarbon dioxygenase from Cycloclasticus sp. strain A5
Q39711122Redox proteins of hydroxylating bacterial dioxygenases establish a regulatory cascade that prevents gratuitous induction of tetralin biodegradation genes.
Q39964610Regulation of tetralin biodegradation and identification of genes essential for expression of thn operons.
Q35534884Secondary successional trajectories of structural and catabolic bacterial communities in oil-polluted soil planted with hybrid poplar.
Q42946893Tetralin-induced and ThnR-regulated aldehyde dehydrogenase and beta-oxidation genes in Sphingomonas macrogolitabida strain TFA.
Q34998907The ferredoxin ThnA3 negatively regulates tetralin biodegradation gene expression via ThnY, a ferredoxin reductase that functions as a regulator of the catabolic pathway
Q42575479ThnY is a ferredoxin reductase-like iron-sulfur flavoprotein that has evolved to function as a regulator of tetralin biodegradation gene expression

Search more.