Core clock, SUB1, and ABAR genes mediate flooding and drought responses via alternative splicing in soybean

scientific article

Core clock, SUB1, and ABAR genes mediate flooding and drought responses via alternative splicing in soybean is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/JXB/ERV407
P698PubMed publication ID26314767
P5875ResearchGate publication ID281282153

P50authorTrupti JoshiQ42306087
Gunvant PatilQ43285212
Henry T NguyenQ86166811
P2093author name stringWei Chen
Song Li
Saad Khan
Raymond N Mutava
Silvas J Prince
Naeem H Syed
Valliyodan Babu
P2860cites workModelling the widespread effects of TOC1 signalling on the plant circadian clock and its outputsQ21202768
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LEA proteins prevent protein aggregation due to water stressQ24535125
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Circadian Clock Genes Universally Control Key Agricultural TraitsQ26864980
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Alternative splicing mediates responses of the Arabidopsis circadian clock to temperature changesQ30414157
Global transcriptome analysis reveals circadian regulation of key pathways in plant growth and development.Q30440986
Genetic mechanisms conferring adaptation to submergence and drought in rice: simple or complex?Q30596408
The circadian clock regulates auxin signaling and responses in ArabidopsisQ33293377
RNA-seq analyses of multiple meristems of soybean: novel and alternative transcripts, evolutionary and functional implicationsQ33358634
Integrating omic approaches for abiotic stress tolerance in soybeanQ33701336
Understanding abiotic stress tolerance mechanisms in soybean: a comparative evaluation of soybean response to drought and flooding stressQ39284558
Thermoplasticity in the plant circadian clock: how plants tell the time-peratureQ41335948
Photosynthetic entrainment of the Arabidopsis thaliana circadian clockQ41839335
Analysis of clock gene homologs using unifoliolates as target organs in soybean (Glycine max).Q43445542
Circadian clock parameter measurement: characterization of clock transcription factors using surface plasmon resonanceQ44313507
CIRCADIAN CLOCK ASSOCIATED1 and LATE ELONGATED HYPOCOTYL function synergistically in the circadian clock of Arabidopsis.Q46582099
Circadian rhythms confer a higher level of fitness to Arabidopsis plants.Q46588457
Comparative transcriptome of diurnally oscillating genes and hormone-responsive genes in Arabidopsis thaliana: insight into circadian clock-controlled daily responses to common ambient stresses in plantsQ46803434
Global dissection of alternative splicing in paleopolyploid soybeanQ46912463
Overexpression of the vacuolar sugar carrier AtSWEET16 modifies germination, growth, and stress tolerance in ArabidopsisQ48617947
Two splice variants of the IDD14 transcription factor competitively form nonfunctional heterodimers which may regulate starch metabolism.Q50521048
Posttranslational regulation of CIRCADIAN CLOCK ASSOCIATED1 in the circadian oscillator of Arabidopsis.Q50597962
Identification of two additional members of the tRNA isopentenyltransferase family in Physcomitrella patens.Q50956719
Submergence tolerance in rice requires Sub1A, an ethylene-response-factor-like gene.Q51997518
A Simple Analytical Method for High-Throughput Screening of Major Sugars from Soybean by Normal-Phase HPLC with Evaporative Light Scattering DetectionQ59104953
Circadian control of carbohydrate availability for growth in Arabidopsis plants at nightQ33927440
Reciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock.Q34085869
Transcriptome survey reveals increased complexity of the alternative splicing landscape in ArabidopsisQ34185155
Mapping the core of the Arabidopsis circadian clock defines the network structure of the oscillatorQ34259774
Plant circadian clocks increase photosynthesis, growth, survival, and competitive advantageQ34436491
Circadian phase has profound effects on differential expression analysisQ34490577
Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to riceQ34555951
Abiotic stress and ABA-inducible Group 4 LEA from Brassica napus plays a key role in salt and drought toleranceQ34600469
Biosynthesis of flavonoids and effects of stressQ34605574
A functional genomics approach reveals CHE as a component of the Arabidopsis circadian clockQ34651457
The ethylene response factors SNORKEL1 and SNORKEL2 allow rice to adapt to deep waterQ34998356
Natural diversity in daily rhythms of gene expression contributes to phenotypic variationQ35031493
Allelic polymorphism of GIGANTEA is responsible for naturally occurring variation in circadian period in Brassica rapaQ35229586
Soybean (Glycine max) SWEET gene family: insights through comparative genomics, transcriptome profiling and whole genome re-sequence analysisQ35688445
Alternative splicing and nonsense-mediated decay modulate expression of important regulatory genes in Arabidopsis.Q35860653
CCA1 alternative splicing as a way of linking the circadian clock to temperature response in ArabidopsisQ36373179
Understanding regulatory networks and engineering for enhanced drought tolerance in plantsQ36398942
Loss of the circadian clock-associated protein 1 in Arabidopsis results in altered clock-regulated gene expressionQ36461391
Alternative splicing of pre-messenger RNAs in plants in the genomic era.Q36707492
Submergence tolerance conferred by Sub1A is mediated by SLR1 and SLRL1 restriction of gibberellin responses in riceQ36954993
Source-to-sink transport of sugar and regulation by environmental factorsQ37040996
Flooding stress: acclimations and genetic diversityQ37150335
Physiological and molecular approaches to improve drought resistance in soybeanQ37527420
The circadian system in higher plantsQ37539967
Starch and the clock: the dark side of plant productivityQ37826994
Abiotic stress and the plant circadian clockQ37843253
Making sense of low oxygen sensingQ37978973
Late Embryogenesis Abundant (LEA) proteins in legumesQ38117371
Jasmonic acid transient accumulation is needed for abscisic acid increase in citrus roots under drought stress conditions.Q38966661
The submergence tolerance regulator SUB1A mediates crosstalk between submergence and drought tolerance in riceQ39013797
LEA proteins in higher plants: structure, function, gene expression and regulationQ39076151
TOC1 functions as a molecular switch connecting the circadian clock with plant responses to droughtQ39168804
Diurnal oscillations of soybean circadian clock and drought responsive genes.Q39214367
Arabidopsis transcriptome analysis under drought, cold, high-salinity and ABA treatment conditions using a tiling arrayQ39225436
P433issue22
P921main subjectdroughtQ43059
alternative mRNA splicing, via spliceosomeQ21114084
P304page(s)7129-7149
P577publication date2015-08-27
P1433published inJournal of Experimental BotanyQ6295179
P1476titleCore clock, SUB1, and ABAR genes mediate flooding and drought responses via alternative splicing in soybean
P478volume66

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cites work (P2860)
Q580569743'-Phosphoadenosine 5'-Phosphate Accumulation Delays the Circadian System
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Q38609470Evolutionarily Conserved Alternative Splicing Across Monocots.
Q90681777Exogenous application of nitric oxide donors regulates short-term flooding stress in soybean
Q36500024Genomic-assisted haplotype analysis and the development of high-throughput SNP markers for salinity tolerance in soybean
Q33363626Identification and Comparative Analysis of Differential Gene Expression in Soybean Leaf Tissue under Drought and Flooding Stress Revealed by RNA-Seq
Q57093123Molecular and physiological responses in roots of two full-sib poplars uncover mechanisms that contribute to differences in partial submergence tolerance
Q38628073Molecular mapping and genomics of soybean seed protein: a review and perspective for the future
Q37356107Soybean TIP Gene Family Analysis and Characterization of GmTIP1;5 and GmTIP2;5 Water Transport Activity
Q64061728Submergence and Waterlogging Stress in Plants: A Review Highlighting Research Opportunities and Understudied Aspects
Q36991024Transcriptomic analysis of submergence-tolerant and sensitive Brachypodium distachyon ecotypes reveals oxidative stress as a major tolerance factor.

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