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| Q39696564 | Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale |
| Q28601049 | Computing the origin and evolution of the ribosome from its structure - Uncovering processes of macromolecular accretion benefiting synthetic biology |
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| Q48074198 | Detecting possibly saturated positions in 18S and 28S sequences and their influence on phylogenetic reconstruction of Annelida (Lophotrochozoa). |
| Q35664770 | Divergence thresholds and divergent biodiversity estimates: can metabarcoding reliably describe zooplankton communities? |
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| Q33438866 | Diversity of 23S rRNA genes within individual prokaryotic genomes |
| Q110666750 | Evidence from the resurrected family Polyrhabdinidae Kamm, 1922 (Apicomplexa: Gregarinomorpha) supports the epimerite, an attachment organelle, as a major eugregarine innovation |
| Q88037859 | Evolution of helix formation in the ribosomal Internal Transcribed Spacer 2 (ITS2) and its significance for RNA secondary structures |
| Q24682434 | Evolutionary rates vary among rRNA structural elements |
| Q33918246 | Evolutionary relationships among Chlamydophila abortus variant strains inferred by rRNA secondary structure-based phylogeny |
| Q91722575 | Genetic and morphological divergence in the warm-water planktonic foraminifera genus Globigerinoides |
| Q24608507 | Genome degeneration and adaptation in a nascent stage of symbiosis |
| Q39330739 | Genomic Survey of a Hyperparasitic Microsporidian Amphiamblys sp. (Metchnikovellidae). |
| Q48483400 | Grass evolution inferred from chromosomal rearrangements and geometrical and statistical features in RNA structure |
| Q35425634 | High genetic diversity and novelty in eukaryotic plankton assemblages inhabiting saline lakes in the Qaidam basin |
| Q28731631 | Intra-genomic ribosomal RNA polymorphism and morphological variation in Elphidium macellum suggests inter-specific hybridization in foraminifera |
| Q28183409 | Intragenomic heterogeneity between multiple 16S ribosomal RNA operons in sequenced bacterial genomes |
| Q60449091 | Large expansion segments in 18S rDNA support a new sponge clade (Class Demospongiae, Order Haplosclerida) |
| Q45894920 | Large subunit mitochondrial rRNA secondary structures and site-specific rate variation in two lizard lineages |
| Q42626846 | Length variation in 18S rRNA expansion segment 43/e4 of Daphnia obtusa: ancient or recurring polymorphism? |
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| Q33321440 | Molecular evolution of rDNA in early diverging Metazoa: first comparative analysis and phylogenetic application of complete SSU rRNA secondary structures in Porifera |
| Q40875856 | Molecular identification of Entamoeba species in savanna woodland chimpanzees (Pan troglodytes schweinfurthii). |
| Q55871611 | Molecular phylogenies challenge the classification of Polymastiidae (Porifera, Demospongiae) based on morphology |
| Q33690903 | Molecular species identification of Central European ground beetles (Coleoptera: Carabidae) using nuclear rDNA expansion segments and DNA barcodes. |
| Q51712381 | Mutations stabilize small subunit ribosomal RNA in desiccation-tolerant cyanobacteria nostoc. |
| Q39612166 | Nearly complete rRNA genes from 371 Animalia: updated structure-based alignment and detailed phylogenetic analysis |
| Q40875921 | New Comparative Analysis Based on the Secondary Structure of SSU-rRNA Gene Reveals the Evolutionary Trend and the Family-Genus Characters of Mobilida (Ciliophora, Peritrichia). |
| Q46822434 | New insights into the molecular phylogeny of Balantidium (Ciliophora, Vetibuliferida) based on the analysis of new sequences of species from fish hosts |
| Q30276988 | Nomenclature for the Nameless: A Proposal for an Integrative Molecular Taxonomy of Cryptic Diversity Exemplified by Planktonic Foraminifera. |
| Q28749592 | Origin and evolution of the ribosome |
| Q92782817 | Pediludiella daitoensis gen. et sp. nov. (Scenedesmaceae, Chlorophyceae), a large coccoid green alga isolated from a Loxodes ciliate |
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| Q28743242 | Potential pitfalls of modelling ribosomal RNA data in phylogenetic tree reconstruction: evidence from case studies in the Metazoa |
| Q28730591 | Pseudoscorpion mitochondria show rearranged genes and genome-wide reductions of RNA gene sizes and inferred structures, yet typical nucleotide composition bias |
| Q30390338 | Quantifying the relationship between sequence and three-dimensional structure conservation in RNA. |
| Q35175622 | Rate accelerations in nuclear 18S rDNA of mycoheterotrophic and parasitic angiosperms |
| Q35598503 | Rates of recombination in the ribosomal DNA of apomictically propagated Daphnia obtusa lines |
| Q111741958 | Revealing hidden diversity in the Cryptomonas erosa clade (Cryptophyceae), with the description of two new species from acidic habitats |
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| Q51588129 | Ribosomal protein-sequence block structure suggests complex prokaryotic evolution with implications for the origin of eukaryotes. |
| Q80260213 | Ribosome origins: the relative age of 23S rRNA Domains |
| Q75226777 | Secondary structure and molecular evolution of the mitochondrial small subunit ribosomal RNA in Agaricales (Euagarics clade, Homobasidiomycota) |
| Q36922769 | Structural diversity of eukaryotic 18S rRNA and its impact on alignment and phylogenetic reconstruction |
| Q43770212 | Supplemental diagnosis of a myxozoan parasite from common carp Cyprinus carpio: synonymy of Thelohanellus xinyangensis with Thelohanellus kitauei |
| Q57863978 | The 18S rRNA from Odontophrynus americanus 2n and 4n (Amphibia, Anura) reveals unusual extra sequences in the variable region V2 |
| Q24600334 | The European ribosomal RNA database |
| Q39278841 | The GC content of LSU rRNA evolves across topological and functional regions of the ribosome in all three domains of life |
| Q45371207 | The nuclear 18S ribosomal RNA gene as a source of phylogenetic information in the genus Taenia |
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