| scholarly article | Q13442814 |
| P2093 | author name string | F R Blattner | |
| M B Goldberg | |||
| M M Venkatesan | |||
| D J Rose | |||
| V Burland | |||
| E J Grotbeck | |||
| P2860 | cites work | Lateral gene transfer and the nature of bacterial innovation | Q22122396 |
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| Multiple independent origins of Shigella clones of Escherichia coli and convergent evolution of many of their characteristics | Q24652261 | ||
| The complete genome sequence of Escherichia coli K-12 | Q27860542 | ||
| The COG database: a tool for genome-scale analysis of protein functions and evolution | Q27936664 | ||
| Hundreds of ankyrin-like repeats in functionally diverse proteins: mobile modules that cross phyla horizontally? | Q28249671 | ||
| IpaB mediates macrophage apoptosis induced by Shigella flexneri | Q28254424 | ||
| Subdivision of the Escherichia coli K-12 genome for sequencing: manipulation and DNA sequence of transposable elements introducing unique restriction sites | Q31951212 | ||
| Mechanism of Shigella entry into epithelial cells | Q33536573 | ||
| Type III secretion machines: bacterial devices for protein delivery into host cells | Q33639326 | ||
| Characterization of invasion plasmid antigen genes (ipaBCD) from Shigella flexneri | Q33682684 | ||
| Global burden of Shigella infections: implications for vaccine development and implementation of control strategies | Q33749510 | ||
| The stability region of the large virulence plasmid of Shigella flexneri encodes an efficient postsegregational killing system | Q33789850 | ||
| IS elements as constituents of bacterial genomes | Q33836581 | ||
| Interactions of CcdB with DNA gyrase. Inactivation of Gyra, poisoning of the gyrase-DNA complex, and the antidote action of CcdA. | Q33858140 | ||
| Vaccination against shigellosis with attenuated Shigella flexneri 2a strain SC602 | Q33876803 | ||
| The pathogenesis of Shigella flexneri infection: lessons from in vitro and in vivo studies | Q33955468 | ||
| The virulence plasmid-encoded impCAB operon enhances survival and induced mutagenesis in Shigella flexneri after exposure to UV radiation. | Q34000703 | ||
| Complete DNA sequence and structural analysis of the enteropathogenic Escherichia coli adherence factor plasmid | Q34002232 | ||
| Curli loci of Shigella spp | Q34004902 | ||
| A plasmid-encoded regulatory region activates chromosomal eaeA expression in enteropathogenic Escherichia coli. | Q35409065 | ||
| Identification and cloning of a novel plasmid-encoded enterotoxin of enteroinvasive Escherichia coli and Shigella strains | Q35455031 | ||
| Human monocyte-derived macrophages infected with virulent Shigella flexneri in vitro undergo a rapid cytolytic event similar to oncosis but not apoptosis | Q35545918 | ||
| Identification of a pathogenicity island, which contains genes for virulence and avirulence, on a large native plasmid in the bean pathogen Pseudomonas syringae pathovar phaseolicola | Q35635473 | ||
| DNA adenine methylase mutants of Salmonella typhimurium show defects in protein secretion, cell invasion, and M cell cytotoxicity | Q35657182 | ||
| "Black holes" and bacterial pathogenicity: a large genomic deletion that enhances the virulence of Shigella spp. and enteroinvasive Escherichia coli | Q36013594 | ||
| Expression of the repA1 gene of IncFII plasmid NR1 is translationally coupled to expression of an overlapping leader peptide | Q36136101 | ||
| Autoregulation of the stability operon of IncFII plasmid NR1 | Q36136135 | ||
| Involvement of a plasmid in the invasive ability of Shigella flexneri. | Q36437346 | ||
| Genome sequencing on both strands: the Janus strategy. | Q36766373 | ||
| A basic replicon of virulence-associated plasmids of Shigella spp. and enteroinvasive Escherichia coli is homologous with a basic replicon in plasmids of IncF groups | Q36995809 | ||
| Isolation, characterization, and mapping of Tn5 insertions into the 140-megadalton invasion plasmid defective in the mouse Sereny test in Shigella flexneri 2a | Q37011844 | ||
| Molecular alteration of the 140-megadalton plasmid associated with loss of virulence and Congo red binding activity in Shigella flexneri | Q37056357 | ||
| Loss of pigmentation in Shigella flexneri 2a is correlated with loss of virulence and virulence-associated plasmid | Q37080399 | ||
| Thymic independence of adaptive immunity to the intracellular pathogen Shigella flexneri serotype 2a | Q39511268 | ||
| Common and specific characteristics of the high-pathogenicity island of Yersinia enterocolitica | Q39512306 | ||
| Shigella flexneri IpaH(7.8) facilitates escape of virulent bacteria from the endocytic vacuoles of mouse and human macrophages | Q39516481 | ||
| Escherichia coli clone Sonnei (Shigella sonnei) had a chromosomal O-antigen gene cluster prior to gaining its current plasmid-borne O-antigen genes. | Q39566331 | ||
| Molecular evolution of a pathogenicity island from enterohemorrhagic Escherichia coli O157:H7. | Q39572360 | ||
| DNA sequencing and analysis of the low-Ca2+-response plasmid pCD1 of Yersinia pestis KIM5. | Q39573090 | ||
| The complete DNA sequence and analysis of the large virulence plasmid of Escherichia coli O157:H7. | Q39724981 | ||
| A novel Escherichia coli lipid A mutant that produces an antiinflammatory lipopolysaccharide | Q39757929 | ||
| Identification of additional genes required for O-antigen biosynthesis in Vibrio cholerae O1. | Q39845074 | ||
| Comparative analysis of functional and structural features in the primase-dependent priming signals, G sites, from phages and plasmids | Q39932325 | ||
| Spontaneous insertion of an IS1-like element into the virF gene is responsible for avirulence in opaque colonial variants of Shigella flexneri 2a. | Q40148576 | ||
| Structural and functional features of cis-acting sequences in the basic replicon of plasmid ColIb-P9 | Q40547739 | ||
| An essential role for DNA adenine methylation in bacterial virulence | Q40639021 | ||
| Kinetic aspects of control of plasmid replication by antisense RNA. | Q40682089 | ||
| Pathogenicity islands: bacterial evolution in quantum leaps | Q41245669 | ||
| Induction of type III secretion in Shigella flexneri is associated with differential control of transcription of genes encoding secreted proteins | Q41996093 | ||
| The Sinorhizobium meliloti insertion sequence (IS) element ISRm14 is related to a previously unrecognized IS element located adjacent to the Escherichia coli locus of enterocyte effacement (LEE) pathogenicity island | Q42610218 | ||
| IS1294, a DNA element that transposes by RC transposition | Q42628926 | ||
| Nucleotide sequence of the promoter-distal region of the tra operon of plasmid R100, including traI (DNA helicase I) and traD genes | Q42631934 | ||
| Evolutionary perspective on a composite Shigella flexneri 2a virulence plasmid-borne locus comprising three distinct genetic elements | Q42641328 | ||
| Characterization and splicing in vivo of a Sinorhizobium meliloti group II intron associated with particular insertion sequences of the IS630-Tc1/IS3 retroposon superfamily | Q42681753 | ||
| Virulence phenotype and genetic characteristics of the T32-ISTRATI Shigella flexneri 2a vaccine strain | Q45892563 | ||
| SepA, the 110 kDa protein secreted by Shigella flexneri: two-domain structure and proteolytic activity | Q47721067 | ||
| SopA, the outer membrane protease responsible for polar localization of IcsA in Shigella flexneri | Q48053197 | ||
| Sequence variation in two ipaH genes of Shigella flexneri 5 and homology to the LRG-like family of proteins | Q48207710 | ||
| Site-specific recombination promoted by a short DNA segment of plasmid R1 and by a homologous segment in the terminus region of the Escherichia coli chromosome | Q48216055 | ||
| Two AraC/XylS family members can independently counteract the effect of repressing sequences upstream of the hilA promoter. | Q50126541 | ||
| UDP-sugar hydrolase isozymes in Salmonella enterica and Escherichia coli: silent alleles of ushA in related strains of group I Salmonella isolates, and of ushB in wild-type and K12 strains of E. coli, indicate recent and early silencing events, resp | Q50155321 | ||
| The mkaC virulence gene of the Salmonella serovar typhimurium 96 kb plasmid encodes a transcriptional activator. | Q50184959 | ||
| Genotypic and phenotypic characterization of an aroD deletion-attenuated Escherichia coli K12-Shigella flexneri hybrid vaccine expressing S. flexneri 2a somatic antigen | Q51196626 | ||
| The P1 ParA protein and its ATPase activity play a direct role in the segregation of plasmid copies to daughter cells. | Q52521938 | ||
| DNA replication of the resistance plasmid R100 and its control. | Q54438238 | ||
| Erratum: Retrotransposition of a bacterial group II intron | Q59066149 | ||
| Molecular characterization of a trans-acting, positive effector (ipaR) of invasion plasmid antigen synthesis in Shigella flexneri serotype 5 | Q68471375 | ||
| Control of replication of FII plasmids: comparison of the basic replicons and of the copB systems of plasmids R100 and R1 | Q69894166 | ||
| The absence of a surface protease, OmpT, determines the intercellular spreading ability of Shigella: the relationship between the ompT and kcpA loci | Q70511697 | ||
| UvrD-dependent replication of rolling-circle plasmids in Escherichia coli | Q73348549 | ||
| Structural diversity of leucine-rich repeat proteins | Q74419749 | ||
| Toxin-antitoxin systems homologous with relBE of Escherichia coli plasmid P307 are ubiquitous in prokaryotes | Q77901497 | ||
| Analysis of the CoIE1 stability determinant Rcd | Q78174268 | ||
| P433 | issue | 5 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | Shigella flexneri | Q1644417 |
| P304 | page(s) | 3271-3285 | |
| P577 | publication date | 2001-05-01 | |
| P1433 | published in | Infection and Immunity | Q6029193 |
| P1476 | title | Complete DNA sequence and analysis of the large virulence plasmid of Shigella flexneri | |
| P478 | volume | 69 |
| Q35106240 | A Salmonella enterica serovar typhimurium translocated leucine-rich repeat effector protein inhibits NF-kappa B-dependent gene expression. |
| Q33315560 | A functional genomic yeast screen to identify pathogenic bacterial proteins |
| Q28538799 | A substrate-fusion protein is trapped inside the Type III Secretion System channel in Shigella flexneri |
| Q34314618 | Activation of prophage eib genes for immunoglobulin-binding proteins by genes from the IbrAB genetic island of Escherichia coli ECOR-9. |
| Q42373350 | An H-NS Family Protein, Sfh, Regulates Acid Resistance by Inhibition of Glutamate Decarboxylase Expression in Shigella flexneri 2457T. |
| Q92822336 | An Oral Inoculation Infant Rabbit Model for Shigella Infection |
| Q35548977 | An msbB homologue carried in plasmid pO157 encodes an acyltransferase involved in lipid A biosynthesis in Escherichia coli O157:H7. |
| Q33256724 | Analysis of mercuric reductase (merA) gene diversity in an anaerobic mercury-contaminated sediment enrichment |
| Q41929574 | Atypical Shigella boydii 13 encodes virulence factors seen in attaching and effacing Escherichia coli |
| Q26766507 | Bacteria-host relationship: ubiquitin ligases as weapons of invasion |
| Q41461380 | Characterization and Comparative Overview of Complete Sequences of the First Plasmids of Pandoraea across Clinical and Non-clinical Strains |
| Q34394744 | Characterization of WRSs2 and WRSs3, new second-generation virG(icsA)-based Shigella sonnei vaccine candidates with the potential for reduced reactogenicity |
| Q44904840 | Chromosomal and plasmid-encoded enzymes are required for assembly of the R3-type core oligosaccharide in the lipopolysaccharide of Escherichia coli O157:H7. |
| Q42685926 | Comparison of the virulence plasmid genomes of two strains of Shigella which lost the ability to bind Congo red. |
| Q36376664 | Comparison of two major forms of the Shigella virulence plasmid pINV: positive selection is a major force driving the divergence |
| Q91605594 | Complete genome sequence and annotation of the laboratory reference strain Shigella flexneri serotype 5a M90T and genome-wide transcriptional start site determination |
| Q22065494 | Complete genome sequence and comparative genomics of Shigella flexneri serotype 2a strain 2457T |
| Q33248973 | Complete genome sequence of Shigella flexneri 5b and comparison with Shigella flexneri 2a. |
| Q42693452 | Complete nucleotide sequence of carbazole/dioxin-degrading plasmid pCAR1 in Pseudomonas resinovorans strain CA10 indicates its mosaicity and the presence of large catabolic transposon Tn4676. |
| Q39853025 | Composition, acquisition, and distribution of the Vi exopolysaccharide-encoding Salmonella enterica pathogenicity island SPI-7. |
| Q39655324 | Construction, characterization, and animal testing of WRSd1, a Shigella dysenteriae 1 vaccine |
| Q34580381 | Deletion of pic results in decreased virulence for a clinical isolate of Shigella flexneri 2a from China |
| Q40486636 | Deletion of toxin-antitoxin systems in the evolution of Shigella sonnei as a host-adapted pathogen |
| Q38608685 | Differential regulation by magnesium of the two MsbB paralogs of Shigella flexneri. |
| Q37929056 | Differentiation between Shigella, enteroinvasive Escherichia coli (EIEC) and noninvasive Escherichia coli |
| Q33627338 | Emergence of a new multidrug-resistant serotype X variant in an epidemic clone of Shigella flexneri |
| Q37105856 | Enhanced Type III Secretion System Expression of Atypical Shigella flexneri II:(3)4,7(8). |
| Q60584774 | Enterobacteria and host resistance to infection |
| Q28205317 | Escherichia coli in disguise: molecular origins of Shigella |
| Q35896703 | Evolutionary, ecological and biotechnological perspectives on plasmids resident in the human gut mobile metagenome |
| Q39249057 | Excision of the Shigella resistance locus pathogenicity island in Shigella flexneri is stimulated by a member of a new subgroup of recombination directionality factors |
| Q54377705 | Expression of bacterial virulence factors and cytokines during in vitro macrophage infection by enteroinvasive Escherichia coli and Shigella flexneri: a comparative study. |
| Q34009180 | Ferric dicitrate transport system (Fec) of Shigella flexneri 2a YSH6000 is encoded on a novel pathogenicity island carrying multiple antibiotic resistance genes |
| Q42370912 | Genetic plasticity of the Shigella virulence plasmid is mediated by intra- and inter-molecular events between insertion sequences |
| Q22065995 | Genome sequence of Shigella flexneri 2a: insights into pathogenicity through comparison with genomes of Escherichia coli K12 and O157 |
| Q92134164 | Genomic and molecular characterisation of Escherichia marmotae from wild rodents in Qinghai-Tibet plateau as a potential pathogen |
| Q36841958 | Genomics of IncP-1 antibiotic resistance plasmids isolated from wastewater treatment plants provides evidence for a widely accessible drug resistance gene pool |
| Q88945458 | Going around in circles: virulence plasmids in enteric pathogens |
| Q42058447 | H-NS antagonism in Shigella flexneri by VirB, a virulence gene transcription regulator that is closely related to plasmid partition factors. |
| Q28078849 | H-NS, Its Family Members and Their Regulation of Virulence Genes in Shigella Species |
| Q34983042 | Histone-like proteins and the Shigella invasivity regulon |
| Q42689303 | Identification and characterization of bacterial class E group II introns. |
| Q36575325 | Identification and molecular characterization of EatA, an autotransporter protein of enterotoxigenic Escherichia coli. |
| Q30836926 | Identification of chromosomal Shigella flexneri genes induced by the eukaryotic intracellular environment |
| Q43918166 | Identification of novel substrates of Shigella T3SA through analysis of its virulence plasmid-encoded secretome |
| Q40460000 | Immunogenicity and characterization of WRSF2G11: a second generation live attenuated Shigella flexneri 2a vaccine strain. |
| Q26750857 | Implications of Spatiotemporal Regulation of Shigella flexneri Type Three Secretion Activity on Effector Functions: Think Globally, Act Locally |
| Q29304089 | Improving gene annotation of complete viral genomes |
| Q37129879 | Investigating the Relatedness of Enteroinvasive Escherichia coli to Other E. coli and Shigella Isolates by Using Comparative Genomics. |
| Q44132218 | Microbiological comparative study of isolates of Edwardsiella tarda isolated in different countries from fish and humans |
| Q33795497 | Modulation of an outer membrane protease contributes to the virulence defect of Shigella flexneri strains carrying a mutation in the virK locus |
| Q37583225 | Molecular basis of the indole-negative reaction in Shigella strains: extensive damages to the tna operon by insertion sequences |
| Q36422508 | Molecular pathogenesis of Shigella spp.: controlling host cell signaling, invasion, and death by type III secretion. |
| Q38605696 | Plasmid stability analysis based on a new theoretical model employing stochastic simulations |
| Q35329047 | Prevalence and significance of plasmid maintenance functions in the virulence plasmids of pathogenic bacteria |
| Q92580501 | RNA-Seq analysis of the T3SA regulon in Shigella flexneri reveals two new chromosomal genes upregulated in the on-state |
| Q57945192 | Recent insights into Shigella |
| Q38374768 | Relationship among Shigella spp. and enteroinvasive Escherichia coli (EIEC) and their differentiation |
| Q37806667 | Research progress in Shigella in the postgenomic era. |
| Q59808943 | Revisiting Bacterial Ubiquitin Ligase Effectors: Weapons for Host Exploitation |
| Q51095151 | Revisiting the molecular evolutionary history of Shigella spp. |
| Q43421563 | Roles of plasmid-encoded proteins, EseH, EseI and EscD in invasion, replication and virulence of Edwardsiella ictaluri |
| Q38294092 | Safety and colonization of two novel VirG(IcsA)-based live Shigella sonnei vaccine strains in rhesus macaques (Macaca mulatta) |
| Q50107572 | Sequence analysis and characterization of plasmid pSFD10 from Salmonella choleraesuis. |
| Q34219679 | Shigella flexneri 2a strain 2457T expresses three members of the H-NS-like protein family: characterization of the Sfh protein |
| Q89565775 | Shigella flexneri: an emerging pathogen |
| Q53941040 | Species differences in plasmid carriage in the Enterobacteriaceae. |
| Q34156236 | Species-specific activation of TLR4 by hypoacylated endotoxins governed by residues 82 and 122 of MD-2 |
| Q40492562 | Structural and Biochemical Characterization of Spa47 Provides Mechanistic Insight into Type III Secretion System ATPase Activation and Shigella Virulence Regulation. |
| Q43368119 | The 64 508 bp IncP-1β antibiotic multiresistance plasmid pB10 isolated from a waste-water treatment plant provides evidence for recombination between members of different branches of the IncP-1β group |
| Q30002390 | The Atlas visualization of genomewide information |
| Q93109786 | The Autotransporter IcsA Promotes Shigella flexneri Biofilm Formation in the Presence of Bile Salts |
| Q34568854 | The Caenorhabditis elegans ABL-1 tyrosine kinase is required for Shigella flexneri pathogenesis |
| Q42603710 | The IncP-6 plasmid Rms149 consists of a small mobilizable backbone with multiple large insertions |
| Q47132224 | The Intriguing Evolutionary Journey of Enteroinvasive E. coli (EIEC) toward Pathogenicity. |
| Q28072947 | The Multifaceted Activity of the VirF Regulatory Protein in the Shigella Lifestyle |
| Q89982797 | The anti-activator of type III secretion, OspD1, is transcriptionally regulated by VirB and H-NS from remote sequences in Shigella flexneri |
| Q38753453 | The genomic signatures of Shigella evolution, adaptation and geographical spread |
| Q34664136 | The human gut mobile metagenome: a metazoan perspective. |
| Q38072072 | The impact of transposable elements in environmental adaptation. |
| Q28492576 | The mismatch repair system (mutS, mutL and uvrD genes) in Pseudomonas aeruginosa: molecular characterization of naturally occurring mutants |
| Q33985382 | The mosaicism of plasmids revealed by atypical genes detection and analysis |
| Q38332702 | Transcriptional adaptation of Shigella flexneri during infection of macrophages and epithelial cells: insights into the strategies of a cytosolic bacterial pathogen |
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