Mutational analyses of dinucleotide and tetranucleotide microsatellites in Escherichia coli: influence of sequence on expansion mutagenesis

scientific article published on July 2000

Mutational analyses of dinucleotide and tetranucleotide microsatellites in Escherichia coli: influence of sequence on expansion mutagenesis is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1093/NAR/28.14.2831
P932PMC publication ID102660
P698PubMed publication ID10908342
P5875ResearchGate publication ID12411789

P2093author name stringG Yan
K A Eckert
P2860cites workFidelity and error specificity of the alpha catalytic subunit of Escherichia coli DNA polymerase IIIQ71245633
Simple repeat DNA is not replicated simplyQ72372652
GAA instability in Friedreich's Ataxia shares a common, DNA-directed and intraallelic mechanism with other trinucleotide diseasesQ74771975
Trinucleotide repeat DNA structures: dynamic mutations from dynamic DNAQ74782097
Yeast ARMs (DNA at-risk motifs) can reveal sources of genome instabilityQ74825051
Mutation rate of a microsatellite sequence in normal human fibroblastsQ77220468
The nucleotide sequence and transcript map of the herpes simplex virus thymidine kinase geneQ24632148
Equilibrium distributions of microsatellite repeat length resulting from a balance between slippage events and point mutationsQ24655175
Simple sequencesQ28236181
Molecular basis of genetic instability of triplet repeatsQ28277837
A National Cancer Institute Workshop on Microsatellite Instability for cancer detection and familial predisposition: development of international criteria for the determination of microsatellite instability in colorectal cancerQ28289377
Slipped-strand mispairing: a major mechanism for DNA sequence evolutionQ28295992
Increased mutation rate at the hprt locus accompanies microsatellite instability in colon cancerQ28305622
Destabilization of tracts of simple repetitive DNA in yeast by mutations affecting DNA mismatch repairQ29618879
Triplex DNA structures.Q34296747
Mutation of human short tandem repeatsQ34357335
Mutator phenotypes in human colorectal carcinoma cell linesQ35568305
Microsatellite alterations as clonal markers for the detection of human cancerQ35819311
(dT-dC)n and (dG-dA)n tracts arrest single stranded DNA replication in vitroQ35864526
Relative mutation rates at di-, tri-, and tetranucleotide microsatellite lociQ35968680
Escherichia coli mutator mutants deficient in methylation-instructed DNA mismatch correctionQ36357026
Hypermutability of homonucleotide runs in mismatch repair and DNA polymerase proofreading yeast mutants.Q36568353
(CT)n (GA)n repeats and heat shock elements have distinct roles in chromatin structure and transcriptional activation of the Drosophila hsp26 geneQ36681709
Repair of DNA heteroduplexes containing small heterologous sequences in Escherichia coliQ36856385
Enhanced Gene Expression by the Poly(dT-dG) · Poly(dC-dA) SequenceQ36955274
Formation of DNA triplexes accounts for arrests of DNA synthesis at d(TC)n and d(GA)n tractsQ37373852
Potential genetic functions of tandem repeated DNA sequence blocks in the human genome are based on a highly conserved "chromatin folding code".Q38146435
Pausing of DNA synthesis in vitro at specific loci in CTG and CGG triplet repeats from human hereditary disease genes.Q38289363
Coupling of a replicative polymerase and helicase: a tau-DnaB interaction mediates rapid replication fork movementQ38361453
Development and use of an in vitro HSV-tk forward mutation assay to study eukaryotic DNA polymerase processing of DNA alkyl lesionsQ39719605
Microsatellite instability in yeast: dependence on repeat unit size and DNA mismatch repair genesQ40022200
High frequencies of short frameshifts in poly-CA/TG tandem repeats borne by bacteriophage M13 in Escherichia coli K-12.Q40388905
Simple sequences are ubiquitous repetitive components of eukaryotic genomes.Q40455691
Instability of simple sequence DNA in Saccharomyces cerevisiaeQ40655124
Somatic mutation rates and specificities at TC/AG and GT/CA microsatellite sequences in nontumorigenic human lymphoblastoid cellsQ40889173
Genetic control of microsatellite stabilityQ41355776
Differences and similarities between various tandem repeat sequences: minisatellites and microsatellitesQ41702537
Molecular analysis of mutations induced in human cells by N-ethyl-N-nitrosoureaQ42201036
recA-dependent and recA-independent N-ethyl-N-nitrosourea mutagenesis at a plasmid-encoded herpes simplex virus thymidine kinase gene in Escherichia coliQ43794354
Evolution and distribution of (GT)n repetitive sequences in mammalian genomesQ46113696
Conservation and evolution of (CT)n/(GA)n microsatellite sequences at orthologous positions in diverse mammalian genomesQ48076245
Survey of human and rat microsatellites.Q48178876
Instability of short tandem repeats (microsatellites) in human cancers.Q48181678
Preferential DNA secondary structure mutagenesis in the lagging strand of replication in E. coliQ54693237
The tetranucleotide repeat polymorphism D21S1245 demonstrates hypermutability in germline and somatic cellsQ57162205
Influence of DNA sequence on the formation of non-B right-handed helices in oligopurine.oligopyrimidine inserts in plasmidsQ69826120
Effect of reaction pH on the fidelity and processivity of exonuclease-deficient Klenow polymeraseQ70460838
P433issue14
P407language of work or nameEnglishQ1860
P921main subjectEscherichia coliQ25419
microsatelliteQ265193
P304page(s)2831-2838
P577publication date2000-07-01
P1433published inNucleic Acids ResearchQ135122
P1476titleMutational analyses of dinucleotide and tetranucleotide microsatellites in Escherichia coli: influence of sequence on expansion mutagenesis
P478volume28

Reverse relations

cites work (P2860)
Q53097055A study on mutational dynamics of simple sequence repeats in relation to mismatch repair system in prokaryotic genomes.
Q40829765An appraisal of the potential for illegitimate recombination in bacterial genomes and its consequences: from duplications to genome reduction
Q39711042Both microsatellite length and sequence context determine frameshift mutation rates in defective DNA mismatch repair
Q44569050Comparison of southern Chinese Han and Brazilian Caucasian mutation rates at autosomal short tandem repeat loci used in human forensic genetics.
Q36457026DNA polymerase kappa produces interrupted mutations and displays polar pausing within mononucleotide microsatellite sequences
Q37328593Distribution of polymorphic and non-polymorphic microsatellite repeats in Xenopus tropicalis.
Q35004110Domain-level differences in microsatellite distribution and content result from different relative rates of insertion and deletion mutations
Q43104148Escherichia coli DNA polymerase IV contributes to spontaneous mutagenesis at coding sequences but not microsatellite alleles
Q42412414Escherichia coli K1-specific bacteriophage CUS-3 distribution and function in phase-variable capsular polysialic acid O acetylation
Q37420612Every microsatellite is different: Intrinsic DNA features dictate mutagenesis of common microsatellites present in the human genome
Q39600720Genomic repeats, genome plasticity and the dynamics of Mycoplasma evolution
Q36812749Human postmeiotic segregation 2 exhibits biased repair at tetranucleotide microsatellite sequences
Q35913895Identification and distribution of Mycobacterium leprae genotypes in a region of high leprosy prevalence in China: a 3-year molecular epidemiological study
Q34430617Locus-specific mutational events in a multilocus variable-number tandem repeat analysis of Escherichia coli O157:H7.
Q36077294Microsatellite Length Scoring by Single Molecule Real Time Sequencing - Effects of Sequence Structure and PCR Regime
Q28262642Microsatellites: simple sequences with complex evolution
Q40719046Mutation rate and specificity analysis of tetranucleotide microsatellite DNA alleles in somatic human cells
Q37735437Mutations in Haemophilus influenzae mismatch repair genes increase mutation rates of dinucleotide repeat tracts but not dinucleotide repeat-driven pilin phase variation rates
Q39646894Mutations in polI but not mutSLH destabilize Haemophilus influenzae tetranucleotide repeats
Q55129339Phasome analysis of pathogenic and commensal Neisseria species expands the known repertoire of phase variable genes, and highlights common adaptive strategies.
Q24648194Slipped-strand mispairing can function as a phase variation mechanism in Escherichia coli
Q33904471The nucleotide composition of microsatellites impacts both replication fidelity and mismatch repair in human colorectal cells
Q34131685What Is a Microsatellite: A Computational and Experimental Definition Based upon Repeat Mutational Behavior at A/T and GT/AC Repeats
Q47310153Y-chromosomal microsatellite mutation rates: differences in mutation rate between and within loci

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