HOX gene complement and expression in the planarian Schmidtea mediterranea

scientific article published on 30 March 2016

HOX gene complement and expression in the planarian Schmidtea mediterranea is …
instance of (P31):
scholarly articleQ13442814

External links are
P6179Dimensions Publication ID1017141232
P356DOI10.1186/S13227-016-0044-8
P932PMC publication ID4815179
P698PubMed publication ID27034770

P50authorBret J PearsonQ58145011
Gary D. BaderQ37393655
P2093author name stringKo W Currie
ChangJiang Xu
Veronique Voisin
Shujun Zhu
David D R Brown
P2860cites workThe genome of the hydatid tapeworm Echinococcus granulosusQ22122073
The octopus genome and the evolution of cephalopod neural and morphological noveltiesQ22122127
The genome of the blood fluke Schistosoma mansoniQ22122228
Acoel Flatworms: Earliest Extant Bilaterian Metazoans, Not Members of PlatyhelminthesQ22299415
MrBayes 3: Bayesian phylogenetic inference under mixed modelsQ26778438
The TALE class homeobox gene Smed-prep defines the anterior compartment for head regenerationQ27347706
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and UsabilityQ27860817
edgeR: a Bioconductor package for differential expression analysis of digital gene expression dataQ27860819
Acoel development indicates the independent evolution of the bilaterian mouth and anusQ28294741
SmedGD 2.0: The Schmidtea mediterranea genome databaseQ28602777
Evo-devo: variations on ancestral themesQ28755209
A gene complex controlling segmentation in DrosophilaQ29547506
Zebrafish hox clusters and vertebrate genome evolutionQ29616830
In situ hybridization protocol for enhanced detection of gene expression in the planarian Schmidtea mediterraneaQ30538111
The Hox gene complement of acoel flatworms, a basal bilaterian cladeQ30760827
The Schmidtea mediterranea database as a molecular resource for studying platyhelminthes, stem cells and regenerationQ31117991
Hox genes and the parasitic flatworms: new opportunities, challenges and lessons from the free-livingQ33304722
A planarian p53 homolog regulates proliferation and self-renewal in adult stem cell lineagesQ33561621
The pha-4 gene is required to generate the pharyngeal primordium of Caenorhabditis elegansQ47069393
HomeoDB: a database of homeobox gene diversityQ47338534
Transcription factors lhx1/5-1 and pitx are required for the maintenance and regeneration of serotonergic neurons in planariansQ47889898
The planarian HOM/HOX homeobox genes (Plox) expressed along the anteroposterior axisQ47958553
Conserved anterior boundaries of Hox gene expression in the central nervous system of the leech HelobdellaQ48043617
Planaria FoxA (HNF3) homologue is specifically expressed in the pharynx-forming cellsQ48382817
The planarian nanos-like gene Smednos is expressed in germline and eye precursor cells during development and regeneration.Q51759170
Silencing of Smed-betacatenin1 generates radial-like hypercephalized planarians.Q51963787
Hox gene expression in larval development of the polychaetes Nereis virens and Platynereis dumerilii (Annelida, Lophotrochozoa).Q51998833
Position-specific and non-colinear expression of the planarian posterior (Abdominal-B-like) geneQ73706946
The abdominal-B-like gene expression during larval development of Nereis virens (polychaeta)Q74244053
Smed-betacatenin-1 is required for anteroposterior blastema polarity in planarian regenerationQ80156777
Germ layer specification and axial patterning in the embryonic development of the freshwater planarian Schmidtea polychroaQ82642453
Hox genes in the parasitic platyhelminthes Mesocestoides corti, Echinococcus multilocularis, and Schistosoma mansoni: evidence for a reduced Hox complementQ83217741
A clonal analysis of determination in Antennapedia a homoeotic mutant of Drosophila melanogasterQ33817790
Hox genes in brachiopods and priapulids and protostome evolutionQ33866732
The hepatocyte nuclear factor 3 (HNF3 or FOXA) family in metabolismQ33911926
Two-color fluorescent in situ hybridization in the embryonic zebrafish brain using differential detection systemsQ33949913
HOX genes in the sepiolid squid Euprymna scolopes: implications for the evolution of complex body plansQ34012298
Identification of planarian homeobox sequences indicates the antiquity of most Hox/homeotic gene subclassesQ34038500
Not your father's planarian: a classic model enters the era of functional genomics.Q34125141
Evolution of homeobox genesQ34353465
The rise and fall of Hox gene clustersQ34635194
Hox clusters and bilaterian phylogenyQ34831880
Estimating maximum likelihood phylogenies with PhyML.Q34976656
Hox genes and vertebrate axial patternQ34995349
Hox genes and the evolution of the arthropod body planQ35030473
nanos function is essential for development and regeneration of planarian germ cells.Q35749561
Hox clusters as models for vertebrate genome evolutionQ36168876
Hox genes: a continuation of embryonic patterning?Q36329880
SmedGD: the Schmidtea mediterranea genome databaseQ36454142
Hox genes are not always Colinear.Q36501239
Planarian Hox genes: novel patterns of expression during regeneration.Q36843564
Function and specificity of Hox genesQ37402589
Class 3 Hox genes in insects and the origin of zen.Q37407330
Selective amputation of the pharynx identifies a FoxA-dependent regeneration program in planaria.Q37700551
Hox genes and regional patterning of the vertebrate body planQ37740588
Epigenetic control of Hox genes during neurogenesis, development, and disease.Q37782485
Hox collinearity - a new perspectiveQ37976580
Hox genes and region-specific sensorimotor circuit formation in the hindbrain and spinal cordQ38133434
The head-regeneration transcriptome of the planarian Schmidtea mediterranea.Q39983807
Β-catenin-dependent control of positional information along the AP body axis in planarians involves a teashirt family member.Q41626562
A comparative transcriptomic analysis reveals conserved features of stem cell pluripotency in planarians and mammalsQ41829171
Muscle cells provide instructions for planarian regenerationQ41898799
Formaldehyde-based whole-mount in situ hybridization method for planariansQ41947311
Single-cell analysis reveals functionally distinct classes within the planarian stem cell compartmentQ41990372
Beta-catenin defines head versus tail identity during planarian regeneration and homeostasisQ42142686
A mex3 homolog is required for differentiation during planarian stem cell lineage developmentQ42358727
Evolutionary implications of morphogenesis and molecular patterning of the blind gut in the planarian Schmidtea polychroaQ42483547
edgeR for differential RNA-seq and ChIP-seq analysis: an application to stem cell biologyQ42774946
Hox Gene Loss during Dynamic Evolution of the Nematode ClusterQ44109052
P4510describes a project that usesedgeRQ113334690
P921main subjectSchmidtea mediterraneaQ2158498
P304page(s)7
P577publication date2016-03-30
P1433published inEvoDevoQ15816653
P1476titleHOX gene complement and expression in the planarian Schmidtea mediterranea
P478volume7