| scholarly article | Q13442814 |
| P2093 | author name string | Nick J Proudfoot | |
| Justin M O'Sullivan | |||
| Alexandra Binnie | |||
| Andre Furger | |||
| Barbara A Lee | |||
| P2860 | cites work | Initial sequencing and analysis of the human genome | Q21045365 |
| Heterologous introns can enhance expression of transgenes in mice | Q24561537 | ||
| Dissecting the regulatory circuitry of a eukaryotic genome | Q28131632 | ||
| Multiple transcript cleavage precedes polymerase release in termination by RNA polymerase II | Q28199201 | ||
| Stimulatory effect of splicing factors on transcriptional elongation | Q28214807 | ||
| Integrating mRNA processing with transcription | Q28610124 | ||
| RNA polymerase II and the integration of nuclear events | Q29614772 | ||
| Alternative pre-mRNA splicing: the logic of combinatorial control | Q29615087 | ||
| Alternative splicing: increasing diversity in the proteomic world | Q29618730 | ||
| Lentivirus replication and regulation | Q33847672 | ||
| A conserved mRNA export machinery coupled to pre-mRNA splicing | Q34120025 | ||
| U1 snRNA associates with TFIIH and regulates transcriptional initiation | Q34155320 | ||
| Gene therapy: trials and tribulations | Q34186665 | ||
| Genome-wide bioinformatic and molecular analysis of introns in Saccharomyces cerevisiae | Q34361753 | ||
| Phosphorylated RNA polymerase II stimulates pre-mRNA splicing | Q35197241 | ||
| Introns increase transcriptional efficiency in transgenic mice | Q37486009 | ||
| The retroviruses human immunodeficiency virus type 1 and Moloney murine leukemia virus adopt radically different strategies to regulate promoter-proximal polyadenylation. | Q39605433 | ||
| The carboxyl terminus of vertebrate poly(A) polymerase interacts with U2AF 65 to couple 3'-end processing and splicing | Q40442143 | ||
| Intergenic transcription and transinduction of the human beta-globin locus | Q40442993 | ||
| The HIV-1 5' LTR poly(A) site is inactivated by U1 snRNP interaction with the downstream major splice donor site. | Q42122438 | ||
| Interruption of coding sequences by heterologous introns can enhance the functional expression of recombinant genes | Q42648192 | ||
| Genomic-scale quantitative analysis of yeast pre-mRNA splicing: implications for splice-site recognition | Q43206495 | ||
| A handful of intron-containing genes produces the lion's share of yeast mRNA. | Q43206498 | ||
| Stem-loop 1 of the U1 snRNP plays a critical role in the suppression of HIV-1 polyadenylation. | Q43206587 | ||
| Coupling termination of transcription to messenger RNA maturation in yeast. | Q52529973 | ||
| In vitro polyadenylation is stimulated by the presence of an upstream intron | Q67676618 | ||
| Pseudogenes in yeast? | Q68942578 | ||
| Ty elements transpose through an RNA intermediate | Q70078812 | ||
| Poly(A) site selection in the HIV-1 provirus: inhibition of promoter-proximal polyadenylation by the downstream major splice donor site | Q71584691 | ||
| Terminal exon definition occurs cotranscriptionally and promotes termination of RNA polymerase II | Q77308193 | ||
| RNA ligands generated against complex nuclear targets indicate a role for U1 snRNP in co-ordinating transcription and RNA splicing | Q77346195 | ||
| P433 | issue | 21 | |
| P304 | page(s) | 2792-2799 | |
| P577 | publication date | 2002-11-01 | |
| P1433 | published in | Genes & Development | Q1524533 |
| P1476 | title | Promoter proximal splice sites enhance transcription | |
| P478 | volume | 16 |
| Q48304936 | 5´-UTR introns enhance protein expression in the yeast Saccharomyces cerevisiae. |
| Q40448692 | A 5' Noncoding Exon Containing Engineered Intron Enhances Transgene Expression from Recombinant AAV Vectors in vivo. |
| Q36180420 | A Leader Intron of a Soybean Elongation Factor 1A (eEF1A) Gene Interacts with Proximal Promoter Elements to Regulate Gene Expression in Synthetic Promoters. |
| Q35688363 | A genome-wide analysis indicates that yeast pre-mRNA splicing is predominantly posttranscriptional |
| Q33700195 | A global comparison between nuclear and cytosolic transcriptomes reveals differential compartmentalization of alternative transcript isoforms |
| Q36883864 | A mini-intronic plasmid (MIP): a novel robust transgene expression vector in vivo and in vitro |
| Q36906251 | A new function of the splicing factor SRSF2 in the control of E2F1-mediated cell cycle progression in neuroendocrine lung tumors |
| Q34391136 | A novel model for development, organization, and function of gonadotropes in fish pituitary |
| Q34365128 | A quantitative analysis of intron effects on mammalian gene expression |
| Q38787111 | A splicing-dependent transcriptional checkpoint associated with prespliceosome formation. |
| Q36167380 | A subset of nuclear receptor coregulators act as coupling proteins during synthesis and maturation of RNA transcripts |
| Q34127329 | Allele-specific recognition of the 3' splice site of INS intron 1 |
| Q37044036 | Alternative splicing acting as a bridge in evolution. |
| Q28204111 | An evolutionarily conserved role for SRm160 in 3'-end processing that functions independently of exon junction complex formation |
| Q36106993 | Analysis of C. elegans intestinal gene expression and polyadenylation by fluorescence-activated nuclei sorting and 3'-end-seq |
| Q53615854 | Analysis of U1 small nuclear RNA interaction with cyclin H. |
| Q40654122 | Analysis of the stimulatory effect of splicing on mRNA production and utilization in mammalian cells |
| Q41062668 | Biochemical analysis of TREX complex recruitment to intronless and intron-containing yeast genes |
| Q37360004 | Bipartite functions of the CREB co-activators selectively direct alternative splicing or transcriptional activation |
| Q34206730 | CCDC22: a novel candidate gene for syndromic X-linked intellectual disability |
| Q27022532 | Cell-context dependent TCF/LEF expression and function: alternative tales of repression, de-repression and activation potentials |
| Q39180954 | Common Stress Transcriptome Analysis Reveals Functional and Genomic Architecture Differences Between Early and Delayed Response Genes |
| Q41355869 | Cotranscriptional spliceosome assembly dynamics and the role of U1 snRNA:5'ss base pairing in yeast |
| Q39663252 | Counting on co-transcriptional splicing |
| Q37791583 | Cross-talk in transcription, splicing and chromatin: who makes the first call? |
| Q24609035 | DBASS3 and DBASS5: databases of aberrant 3'- and 5'-splice sites |
| Q36578949 | DExD/H box RNA helicases: multifunctional proteins with important roles in transcriptional regulation |
| Q37508064 | Divergent transcription: a driving force for new gene origination? |
| Q26852632 | Dynamic integration of splicing within gene regulatory pathways |
| Q35137961 | Early formation of mRNP: license for export or quality control? |
| Q54264127 | Effects of hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 1 polymorphisms on fat androstenone level and gene expression in Duroc pigs. |
| Q40704048 | Efficient transcription through an intron requires the binding of an Sm-type U1 snRNP with intact stem loop II to the splice donor |
| Q95423442 | Engineering the push and pull of lipid biosynthesis in oleaginous yeast Yarrowia lipolytica for biofuel production |
| Q36010631 | Enhancement of Transcription by a Splicing-Competent Intron Is Dependent on Promoter Directionality |
| Q35970775 | Evidence for a DNA-Based Mechanism of Intron-Mediated Enhancement. |
| Q36160767 | Exon junction complexes mediate the enhancing effect of splicing on mRNA expression |
| Q41460247 | Exon-intron circular RNAs regulate transcription in the nucleus. |
| Q42089333 | Feed backwards model for microRNA processing and splicing in plants. |
| Q34076440 | Following the 'tracks': Tramtrack69 regulates epithelial tube expansion in the Drosophila ovary through Paxillin, Dynamin, and the homeobox protein Mirror |
| Q41911100 | Functional coupling of last-intron splicing and 3'-end processing to transcription in vitro: the poly(A) signal couples to splicing before committing to cleavage |
| Q45826237 | Functional insights into the core-TFIIH from a comparative survey |
| Q27939095 | Functional interactions between the transcription and mRNA 3′ end processing machineries mediated by Ssu72 and Sub1 |
| Q24813869 | Functional studies on the ATM intronic splicing processing element |
| Q91914674 | Functions of the Heterologous Intron-Derived Fragments Intra and Extra Factor IX-cDNA Coding Region on the Human Factor IX Expression in HepG2 and Hek-293T Cells |
| Q33807911 | GC content around splice sites affects splicing through pre-mRNA secondary structures |
| Q34427946 | Genome-wide distribution of RNA-DNA hybrids identifies RNase H targets in tRNA genes, retrotransposons and mitochondria |
| Q33829781 | Genome-wide functional analysis of human 5' untranslated region introns |
| Q40442714 | H2B ubiquitylation controls the formation of export-competent mRNP. |
| Q41705374 | HIV-1 splicing at the major splice donor site is restricted by RNA structure |
| Q35114297 | How introns influence and enhance eukaryotic gene expression |
| Q33527561 | Identification and functional characterisation of the promoter of the calcium sensor gene CBL1 from the xerophyte Ammopiptanthus mongolicus |
| Q38294689 | Identification of the cellular targets of the transcription factor TCERG1 reveals a prevalent role in mRNA processing. |
| Q34902920 | Improvement of SMN2 pre-mRNA processing mediated by exon-specific U1 small nuclear RNA. |
| Q33252529 | In vivo commitment to yeast cotranscriptional splicing is sensitive to transcription elongation mutants |
| Q92999790 | In vivo measurements reveal a single 5'-intron is sufficient to increase protein expression level in Caenorhabditis elegans |
| Q37851045 | InTRONs in biotech |
| Q38255119 | Insights into the U1 small nuclear ribonucleoprotein complex superfamily |
| Q39185469 | Integration of mRNP formation and export |
| Q33915371 | Introduction to cotranscriptional RNA splicing |
| Q37562407 | Intron-Mediated Enhancement: A Tool for Heterologous Gene Expression in Plants? |
| Q36302418 | Introns and gene expression: cellular constraints, transcriptional regulation, and evolutionary consequences |
| Q28278199 | Introns in UTRs: why we should stop ignoring them |
| Q28767577 | Introns regulate RNA and protein abundance in yeast |
| Q26766666 | Introns: The Functional Benefits of Introns in Genomes |
| Q39783741 | Limited complementarity between U1 snRNA and a retroviral 5' splice site permits its attenuation via RNA secondary structure |
| Q39039061 | Linking amyotrophic lateral sclerosis and spinal muscular atrophy through RNA-transcriptome homeostasis: a genomics perspective |
| Q39864208 | Local character of readthrough activation in adenovirus type 5 early region 1 transcription control |
| Q33652430 | Low-Dose Gene Therapy for Murine PKU Using Episomal Naked DNA Vectors Expressing PAH from Its Endogenous Liver Promoter |
| Q40559049 | MAZ elements alter transcription elongation and silencing of the fibroblast growth factor receptor 2 exon IIIb |
| Q33235594 | Modification of the Creator recombination system for proteomics applications--improved expression by addition of splice sites |
| Q52651132 | Molecular characterization of the B-2 DNA puff gene of Rhynchosciara americana. |
| Q35895223 | Multiple links between transcription and splicing |
| Q47822116 | Mutation of the major 5' splice site renders a CMV-driven HIV-1 proviral clone Tat-dependent: connections between transcription and splicing. |
| Q26851218 | Mutual relationships between transcription and pre-mRNA processing in the synthesis of mRNA |
| Q37058515 | Non-coding RNAs regulating the transcriptional machinery |
| Q34313109 | Nova1 is a master regulator of alternative splicing in pancreatic beta cells. |
| Q34639599 | Nuclear protein TIA-1 regulates COL2A1 alternative splicing and interacts with precursor mRNA and genomic DNA. |
| Q91687471 | Optimization of the Fluorescent Protein Expression Level Based on Pseudorabies Virus Bartha Strain for Neural Circuit Tracing |
| Q50112999 | Our favourite alternative splice site |
| Q41952075 | P-TEFb is not an essential elongation factor for the intronless human U2 snRNA and histone H2b genes |
| Q35198329 | PROMoter uPstream Transcripts share characteristics with mRNAs and are produced upstream of all three major types of mammalian promoters |
| Q42038332 | Perturbation of transcription elongation influences the fidelity of internal exon inclusion in Saccharomyces cerevisiae. |
| Q40815645 | Polypyrimidine tract binding protein modulates efficiency of polyadenylation. |
| Q33730648 | Population genomics of intron splicing in 38 Saccharomyces cerevisiae genome sequences |
| Q34551455 | Pre-mRNA splicing is a determinant of nucleosome organization |
| Q34758398 | Promoter-proximal introns in Arabidopsis thaliana are enriched in dispersed signals that elevate gene expression |
| Q36301827 | Promoter-proximal polyadenylation sites reduce transcription activity. |
| Q37194592 | Quality control of mRNP in the nucleus |
| Q47271139 | RB1 gene mutations in Argentine retinoblastoma patients. Implications for genetic counseling |
| Q41940904 | RNA Polymerase II Elongation at the Crossroads of Transcription and Alternative Splicing |
| Q27322512 | RSR-2, the Caenorhabditis elegans ortholog of human spliceosomal component SRm300/SRRM2, regulates development by influencing the transcriptional machinery |
| Q55318177 | Regulation of RNA polymerase II processivity by Spt5 is restricted to a narrow window during elongation. |
| Q37421110 | Regulation of transcription termination in the nematode Caenorhabditis elegans |
| Q88032015 | Requirement for intron structures in activating the Cd8a locus |
| Q36001289 | Role for gene looping in intron-mediated enhancement of transcription |
| Q36873319 | Role of RNA splicing in mediating lineage-specific expression of the von Willebrand factor gene in the endothelium |
| Q34268990 | Running with RNA polymerase: eukaryotic transcript elongation |
| Q33633977 | Splice-site mutations cause Rrp6-mediated nuclear retention of the unspliced RNAs and transcriptional down-regulation of the splicing-defective genes |
| Q39479568 | Spliceosome assembly is coupled to RNA polymerase II dynamics at the 3' end of human genes |
| Q58454181 | Splicing and Disease |
| Q89837706 | Splicing of enhancer-associated lincRNAs contributes to enhancer activity |
| Q41115863 | Splicing-dependent RNA polymerase pausing in yeast |
| Q37423683 | Suppressor of sable, a putative RNA-processing protein, functions at the level of transcription |
| Q40871398 | TCERG1 regulates alternative splicing of the Bcl-x gene by modulating the rate of RNA polymerase II transcription. |
| Q51640348 | The 5'UTR Intron of Arabidopsis GGT1 Aminotransferase Enhances Promoter Activity by Recruiting RNA Polymerase II. |
| Q42616833 | The Arabidopsis thaliana MHX gene includes an intronic element that boosts translation when localized in a 5' UTR intron |
| Q36444189 | The Central Region of the Drosophila Co-repressor Groucho as a Regulatory Hub. |
| Q45219002 | The HIV-1 major splice donor D1 is activated by splicing enhancer elements within the leader region and the p17-inhibitory sequence |
| Q34303212 | The RNA polymerase II CTD coordinates transcription and RNA processing. |
| Q42015064 | The adenovirus L4-22K protein regulates transcription and RNA splicing via a sequence-specific single-stranded RNA binding |
| Q35886478 | The function of introns |
| Q28189110 | The genetics of TBP and TBP-related factors |
| Q21090175 | The in vivo kinetics of RNA polymerase II elongation during co-transcriptional splicing |
| Q38027972 | The increasing functional repertoire of U1 snRNA. |
| Q40405091 | The intron 5/6 promoter region of the ship1 gene regulates expression in stem/progenitor cells of the mouse embryo |
| Q36840615 | The nuclear envelope and transcriptional control. |
| Q42653099 | The pivotal roles of the plant S-adenosylmethionine decarboxylase 5' untranslated leader sequence in regulation of gene expression at the transcriptional and posttranscriptional levels |
| Q52570602 | The wmN1 enhancer region in intron 1 is required for expression of human PLP1. |
| Q35925452 | Tissue, cell type and stage-specific ectopic gene expression and RNAi induction in the Drosophila testis |
| Q47279388 | Transcription rate strongly affects splicing fidelity and cotranscriptionality in budding yeast. |
| Q44872793 | Transcriptional and post-transcriptional enhancement of gene expression by the 5' UTR intron of rice rubi3 gene in transgenic rice cells |
| Q53100316 | Transcripts of a heterologous gene encoding mite allergen Der f 7 are stabilized by codon optimization in Aspergillus oryzae. |
| Q33823578 | Trichoderma virens β-glucosidase I (BGLI) gene; expression in Saccharomyces cerevisiae including docking and molecular dynamics studies |
| Q40190265 | Two G-rich regulatory elements located adjacent to and 440 nucleotides downstream of the core poly(A) site of the intronless melanocortin receptor 1 gene are critical for efficient 3' end processing |
| Q45963809 | VCP gene variation predicts outcome of advanced non-small-cell lung cancer platinum-based chemotherapy. |
| Q34568916 | Vascular bed-specific regulation of the von Willebrand factor promoter in the heart and skeletal muscle. |
| Q37912004 | Where splicing joins chromatin. |
| Q34509582 | c-Rel regulates Ezh2 expression in activated lymphocytes and malignant lymphoid cells |
| Q34310192 | p54(nrb) associates with the 5' splice site within large transcription/splicing complexes. |
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