Three-dimensional imaging MS of lipids in atherosclerotic plaques: Open-source methods for reconstruction and analysis.

scientific article published on 9 March 2016

Three-dimensional imaging MS of lipids in atherosclerotic plaques: Open-source methods for reconstruction and analysis. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1002/PMIC.201500490
P698PubMed publication ID26958804

P50authorPierre ChaurandQ87920790
Fabrizio MontecuccoQ41112895
Aurélien ThomasQ43198023
Sébastien LengletQ73374478
P2093author name stringMartin Dufresne
Stella S Daskalopoulou
Robert J Doonan
Nathan H Patterson
P2860cites workFiji: an open-source platform for biological-image analysisQ27860912
Global, regional, and national incidence, prevalence, and years lived with disability for 301 acute and chronic diseases and injuries in 188 countries, 1990-2013: a systematic analysis for the Global Burden of Disease Study 2013Q28083357
Analysis of tissue specimens by matrix-assisted laser desorption/ionization imaging mass spectrometry in biological and clinical research.Q28396816
A pyramid approach to subpixel registration based on intensityQ29614713
Monitoring the inflammatory response to infection through the integration of MALDI IMS and MRIQ30453515
3D imaging by mass spectrometry: a new frontierQ30457575
Imaging mass spectrometry: a new technology for the analysis of protein expression in mammalian tissuesQ30662372
Three-dimensional visualization of protein expression in mouse brain structures using imaging mass spectrometry.Q33216017
Imaging mass spectrometry of proteins and peptides: 3D volume reconstructionQ33312819
imzML: Imaging Mass Spectrometry Markup Language: A common data format for mass spectrometry imaging.Q33743179
Imaging mass spectrometry-based histopathologic examination of atherosclerotic lesionsQ33880282
High-speed MALDI-TOF imaging mass spectrometry: rapid ion image acquisition and considerations for next generation instrumentationQ34033116
Data processing for 3D mass spectrometry imagingQ34185412
Exploring three-dimensional matrix-assisted laser desorption/ionization imaging mass spectrometry data: three-dimensional spatial segmentation of mouse kidneyQ34312662
Cardinal: an R package for statistical analysis of mass spectrometry-based imaging experimentsQ34467439
Histology-driven data mining of lipid signatures from multiple imaging mass spectrometry analyses: application to human colorectal cancer liver metastasis biopsiesQ34561048
Silver-assisted laser desorption ionization for high spatial resolution imaging mass spectrometry of olefins from thin tissue sections.Q34593107
LIPID MAPS online tools for lipid researchQ34640464
MRI-compatible pipeline for three-dimensional MALDI imaging mass spectrometry using PAXgene fixation.Q34655726
In vivo isotopically labeled atherosclerotic aorta plaques in ApoE KO mice and molecular profiling by matrix-assisted laser desorption/ionization mass spectrometric imagingQ35321241
Site specificity of atherosclerosis: site-selective responses to atherosclerotic modulatorsQ35578683
Benchmark datasets for 3D MALDI- and DESI-imaging mass spectrometryQ35622241
Use of advantageous, volatile matrices enabled by next-generation high-speed matrix-assisted laser desorption/ionization time-of-flight imaging employing a scanning laser beam.Q35828808
Imaging mass spectrometry in microbiologyQ37009407
Role of lysophosphatidylcholine (LPC) in atherosclerosisQ37066115
Inflammation and plaque vulnerabilityQ37307660
Metabolism and atherogenic disease association of lysophosphatidylcholineQ37537825
Imaging mass spectrometry of thin tissue sections: a decade of collective effortsQ38004712
Imaging mass spectrometry statistical analysisQ38022386
The regional ratio of cholesteryl palmitate to cholesteryl oleate measured by ToF-SIMS as a key parameter of atherosclerosisQ38455421
Estimates of global and regional premature cardiovascular mortality in 2025.Q38959964
Serial 3D imaging mass spectrometry at its tipping pointQ39024260
EBImage--an R package for image processing with applications to cellular phenotypes.Q39783161
A definition of advanced types of atherosclerotic lesions and a histological classification of atherosclerosis. A report from the Committee on Vascular Lesions of the Council on Arteriosclerosis, American Heart Association.Q40467498
Histological correlates of carotid plaque surface morphology on lumen contrast imagingQ44483202
2011 ASA/ACCF/AHA/AANN/AANS/ACR/ASNR/CNS/SAIP/SCAI/SIR/SNIS/SVM/SVS guideline on the management of patients with extracranial carotid and vertebral artery disease: executive summary. A report of the American College of Cardiology Foundation/AmericanQ45352452
Spatial distributions of lipids in atherosclerosis of human coronary arteries studied by time-of-flight secondary ion mass spectrometry.Q46754289
Histological assessment of 526 symptomatic carotid plaques in relation to the nature and timing of ischemic symptoms: the Oxford plaque studyQ48559037
Molecular anatomy of ascending aorta in atherosclerosis by MS Imaging: Specific lipid and protein patterns reflect pathology.Q53466638
Three-dimensional molecular reconstruction of rat heart with mass spectrometry imagingQ57576442
P433issue11-12
P921main subjectatherosclerosisQ12252367
open-source softwareQ1130645
P304page(s)1642-1651
P577publication date2016-05-09
P1433published inProteomicsQ15614164
P1476titleThree-dimensional imaging MS of lipids in atherosclerotic plaques: Open-source methods for reconstruction and analysis
P478volume16

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cites work (P2860)
Q308285113D Mass Spectrometry Imaging Reveals a Very Heterogeneous Drug Distribution in Tumors
Q50186288A high resolution atmospheric pressure matrix-assisted laser desorption/ionization-quadrupole-orbitrap MS platform enables in situ analysis of biomolecules by multi-mode ionization and acquisition
Q50146593Comprehensive targeted and non-targeted lipidomics analyses in failing and non-failing heart
Q93094329Data Processing Pipeline for Lipid Profiling of Carotid Atherosclerotic Plaque with Mass Spectrometry Imaging
Q36344237Feasibility Assessment of a MALDI FTICR Imaging Approach for the 3D Reconstruction of a Mouse Lung
Q50047973Interactive Visual Exploration of 3D Mass Spectrometry Imaging Data Using Hierarchical Stochastic Neighbor Embedding Reveals Spatiomolecular Structures at Full Data Resolution.
Q92528101Mass Spectrometry Imaging of atherosclerosis-affine Gadofluorine following Magnetic Resonance Imaging
Q47829993Mass Spectrometry Imaging: A Review of Emerging Advancements and Future Insights.
Q38712870Mass spectrometry imaging for clinical research - latest developments, applications, and current limitations.
Q39018486Mass spectrometry imaging: a novel technology in rheumatology
Q47212589Matrix-Assisted Laser Desorption/Ionisation Mass Spectrometry Imaging in the Study of Gastric Cancer: A Mini Review
Q36200634Multimodal detection of GM2 and GM3 lipid species in the brain of mucopolysaccharidosis type II mouse by serial imaging mass spectrometry and immunohistochemistry
Q93066358Trends in mass spectrometry imaging for cardiovascular diseases
Q90646370Unsupervised machine learning for exploratory data analysis in imaging mass spectrometry

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