EZ-Rhizo: integrated software for the fast and accurate measurement of root system architecture

scientific article published on 4 November 2008

EZ-Rhizo: integrated software for the fast and accurate measurement of root system architecture is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1111/J.1365-313X.2008.03739.X
P698PubMed publication ID19000163

P50authorRonan SulpiceQ56988204
Michael R BlattQ61770393
Anna AmtmannQ61906707
Richard J PattisonQ64785015
P2093author name stringPatrick Armengaud
Adrian Hills
Kevin Zambaux
P433issue5
P921main subjectsoftwareQ7397
P304page(s)945-956
P577publication date2008-11-04
P1433published inThe Plant JournalQ15766987
P1476titleEZ-Rhizo: integrated software for the fast and accurate measurement of root system architecture
P478volume57

Reverse relations

cites work (P2860)
Q64087073A Genome-Wide Association Study Identifies New Loci Involved in Wound-Induced Lateral Root Formation in
Q27709611A Novel Image-Analysis Toolbox Enabling Quantitative Analysis of Root System Architecture
Q48301475A Scalable Open-Source Pipeline for Large-Scale Root Phenotyping of Arabidopsis
Q57638977A framework for the extraction of quantitative traits from 2D images of mature Arabidopsis thaliana
Q42647809A high-throughput imaging auxanometer for roots and hypocotyls of Arabidopsis using a 2D skeletonizing algorithm
Q38828665A scanner system for high-resolution quantification of variation in root growth dynamics of Brassica rapa genotypes
Q38674693Accelerating root system phenotyping of seedlings through a computer-assisted processing pipeline
Q34141227An integrated method for quantifying root architecture of field-grown maize.
Q34252837Analysis of maize (Zea mays L.) seedling roots with the high-throughput image analysis tool ARIA (Automatic Root Image Analysis).
Q37580880Analysis of plant growth-promoting properties of Bacillus amyloliquefaciens UCMB5113 using Arabidopsis thaliana as host plant
Q50673337Analysis of the Root System Architecture of Arabidopsis Provides a Quantitative Readout of Crosstalk between Nutritional Signals.
Q38462509Arabidopsis thaliana root growth kinetics and lunisolar tidal acceleration
Q35290747Capturing Arabidopsis root architecture dynamics with ROOT-FIT reveals diversity in responses to salinity.
Q38248319Challenges and opportunities for quantifying roots and rhizosphere interactions through imaging and image analysis.
Q35545440Computed tomography scanning can monitor the effects of soil medium on root system development: an example of salt stress in corn
Q93014295Computer vision and machine learning enabled soybean root phenotyping pipeline
Q30636976Considerations for designing chemical screening strategies in plant biology.
Q41441801De novo biosynthesis of cytokinins in the biotrophic fungus Claviceps purpurea
Q43968437Dissecting the role of CHITINASE-LIKE1 in nitrate-dependent changes in root architecture
Q41832918EZ-Rhizo software: the gateway to root architecture analysis
Q89080997EZ-Root-VIS: A Software Pipeline for the Rapid Analysis and Visual Reconstruction of Root System Architecture
Q38555522Endoplasmic reticulum stress triggers ROS signalling, changes the redox state, and regulates the antioxidant defence of Arabidopsis thaliana.
Q34406015Exploring the natural variation for seedling traits and their link with seed dimensions in tomato
Q64971052Extracellular Spermine Triggers a Rapid Intracellular Phosphatidic Acid Response in Arabidopsis, Involving PLDδ Activation and Stimulating Ion Flux.
Q47371529Genetic Components of Root Architecture Remodeling in Response to Salt Stress.
Q34259618Getting to the root of plant biology: impact of the Arabidopsis genome sequence on root research
Q36935730Getting to the roots of it: Genetic and hormonal control of root architecture
Q34352533GiA Roots: software for the high throughput analysis of plant root system architecture.
Q45731157High-resolution time-resolved imaging of in vitro Arabidopsis rosette growth
Q30381332High-throughput phenotyping (HTP) identifies seedling root traits linked to variation in seed yield and nutrient capture in field-grown oilseed rape (Brassica napus L.).
Q57638979Image-Based Phenotyping of the Mature Arabidopsis Shoot System
Q48272550Image-based high-throughput field phenotyping of crop roots.
Q43182568Imaging and analysis platform for automatic phenotyping and trait ranking of plant root systems
Q35743044Influence of rhizobacterial volatiles on the root system architecture and the production and allocation of biomass in the model grass Brachypodium distachyon (L.) P. Beauv.
Q46934949Mapping the epigenetic basis of complex traits.
Q100307175Modeling root system growth around obstacles
Q60915743Morphological Characterization of Root System Architecture in Diverse Tomato Genotypes during Early Growth
Q46061178Multilevel analysis of primary metabolism provides new insights into the role of potassium nutrition for glycolysis and nitrogen assimilation in Arabidopsis roots
Q38056562Multiscale systems analysis of root growth and development: modeling beyond the network and cellular scales
Q91952548MyROOT: a method and software for the semiautomatic measurement of primary root length in Arabidopsis seedlings
Q33355085Natural variation of Arabidopsis root architecture reveals complementing adaptive strategies to potassium starvation.
Q47367607Natural variation of hormone levels in Arabidopsis roots and correlations with complex root architecture
Q36714974Next-generation phenotyping: requirements and strategies for enhancing our understanding of genotype-phenotype relationships and its relevance to crop improvement
Q38515034Novel imaging-based phenotyping strategies for dissecting crosstalk in plant development
Q38241805Phenotypic plasticity of the maize root system in response to heterogeneous nitrogen availability
Q36246570Phenotyping for drought tolerance of crops in the genomics era.
Q48226841Phosphate-Dependent Root System Architecture Responses to Salt Stress.
Q50504668Phosphoenolpyruvate carboxylase (PEPC) and PEPC-kinase (PEPC-k) isoenzymes in Arabidopsis thaliana: role in control and abiotic stress conditions.
Q27708662Plant Water Uptake in Drying Soils
Q37254304QTL meta-analysis of root traits in Brassica napus under contrasting phosphorus supply in two growth systems.
Q43148787Quantitative Trait Locus Analysis of Seed Germination and Seedling Vigor in Brassica rapa Reveals QTL Hotspots and Epistatic Interactions.
Q37974074Quantitative analysis of lateral root development: pitfalls and how to avoid them
Q43471327Recovering root system traits using image analysis exemplified by two-dimensional neutron radiography images of lupine.
Q37622066Reshaping Plant Biology: Qualitative and Quantitative Descriptors for Plant Morphology
Q55381908RhizoChamber-Monitor: a robotic platform and software enabling characterization of root growth.
Q42742028Rhizoslides: paper-based growth system for non-destructive, high throughput phenotyping of root development by means of image analysis.
Q39673160RooTrak: automated recovery of three-dimensional plant root architecture in soil from x-ray microcomputed tomography images using visual tracking
Q27708647Root System Markup Language: Toward a Unified Root Architecture Description Language
Q38526965Root phenotyping: from component trait in the lab to breeding.
Q93211232Root system size response of bzh semi-dwarf oilseed rape hybrids to different nitrogen levels in the field
Q40679611RootGraph: a graphic optimization tool for automated image analysis of plant roots
Q46113819RootScape: a landmark-based system for rapid screening of root architecture in Arabidopsis
Q28070109Roots Withstanding their Environment: Exploiting Root System Architecture Responses to Abiotic Stress to Improve Crop Tolerance
Q92228962Semi-automated Root Image Analysis (saRIA)
Q41507172Specificity versus redundancy in the RAP2.4 transcription factor family of Arabidopsis thaliana: transcriptional regulation of genes for chloroplast peroxidases.
Q50557995Statistical modeling of nitrogen-dependent modulation of root system architecture in Arabidopsis thaliana.
Q89878976The Analysis of the Editing Defects in the dyw2 Mutant Provides New Clues for the Prediction of RNA Targets of Arabidopsis E+-Class PPR Proteins
Q50585695The Arabidopsis R-SNARE VAMP721 Interacts with KAT1 and KC1 K+ Channels to Moderate K+ Current at the Plasma Membrane.
Q46439609The RING E3 Ligase KEEP ON GOING Modulates JASMONATE ZIM-DOMAIN12 Stability.
Q41768851The radical induced cell death protein 1 (RCD1) supports transcriptional activation of genes for chloroplast antioxidant enzymes
Q39977372Three-dimensional root phenotyping with a novel imaging and software platform
Q38035202Transcriptional regulation of phosphate acquisition by higher plants
Q41958390Understanding the development of roots exposed to contaminants and the potential of plant-associated bacteria for optimization of growth
Q57467438Unravelling the complex trait of seed quality: using natural variation through a combination of physiology, genetics and -omics technologies
Q36350442Using a Structural Root System Model to Evaluate and Improve the Accuracy of Root Image Analysis Pipelines

Search more.