High-throughput assessment of context-dependent effects of chromatin proteins

scientific article published on 18 October 2016

High-throughput assessment of context-dependent effects of chromatin proteins is …
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scholarly articleQ13442814

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P6179Dimensions Publication ID1024955018
P356DOI10.1186/S13072-016-0096-Y
P932PMC publication ID5069885
P698PubMed publication ID27777628

P50authorBas van SteenselQ42802330
Laura BruecknerQ88619860
P2093author name stringLudo Pagie
Waseem Akhtar
Joris van Arensbergen
P2860cites workThe Iws1:Spt6:CTD complex controls cotranscriptional mRNA biosynthesis and HYPB/Setd2-mediated histone H3K36 methylationQ24316355
In vivo HP1 targeting causes large-scale chromatin condensation and enhanced histone lysine methylationQ24529080
Mutation in a heterochromatin-specific chromosomal protein is associated with suppression of position-effect variegation in Drosophila melanogasterQ24556518
Krüppel-associated boxes are potent transcriptional repression domainsQ24563259
Regulated recruitment of HP1 to a euchromatic gene induces mitotically heritable, epigenetic gene silencing: a mammalian cell culture model of gene variegationQ24671965
Site-specific transformation of Drosophila via phiC31 integrase-mediated cassette exchangeQ24684492
Heterochromatin remodeling by CDK12 contributes to learning in Drosophila.Q27324109
Identification of in vivo DNA targets of chromatin proteins using tethered dam methyltransferaseQ28140783
Regulation of HP1-chromatin binding by histone H3 methylation and phosphorylationQ29614524
GAL4-VP16 is an unusually potent transcriptional activatorQ29616453
limma powers differential expression analyses for RNA-sequencing and microarray studiesQ29617988
Distinct HP1 and Su(var)3-9 complexes bind to sets of developmentally coexpressed genes depending on chromosomal locationQ33589879
Structure and function of the Zn(II) binding site within the DNA-binding domain of the GAL4 transcription factorQ33852734
Genome-wide HP1 binding in Drosophila: developmental plasticity and genomic targeting signalsQ33942609
The role of Drosophila Lamin C in muscle function and gene expressionQ34080630
A high-resolution whole-genome map of key chromatin modifications in the adult Drosophila melanogasterQ34109795
Systematic protein location mapping reveals five principal chromatin types in Drosophila cellsQ34141226
Generation of stable Drosophila cell lines using multicistronic vectorsQ34166605
Identification and characterization of a novel human histone H3 lysine 36-specific methyltransferaseQ34445102
Epigenetics. Restricted epigenetic inheritance of H3K9 methylation.Q34470100
Oxymoron no more: the expanding world of heterochromatic genesQ34524591
Ectopic HP1 promotes chromosome loops and variegated silencing in DrosophilaQ34582524
Comprehensive analysis of the chromatin landscape in Drosophila melanogasterQ35030499
Position-effect variegation and the genetic dissection of chromatin regulation in DrosophilaQ35043708
Chromatin landscapes of retroviral and transposon integration profilesQ35144895
The epigenetic H3S10 phosphorylation mark is required for counteracting heterochromatic spreading and gene silencing in Drosophila melanogasterQ35672143
Heterochromatin protein 1 (HP1) is associated with induced gene expression in Drosophila euchromatin.Q36381425
Position-effect variegation, heterochromatin formation, and gene silencing in DrosophilaQ37040262
Chromodomain-mediated oligomerization of HP1 suggests a nucleosome-bridging mechanism for heterochromatin assembly.Q37118383
The changing faces of HP1: From heterochromatin formation and gene silencing to euchromatic gene expression: HP1 acts as a positive regulator of transcriptionQ37832719
Single-cell dynamics of genome-nuclear lamina interactionsQ39176932
A network model of the molecular organization of chromatin in DrosophilaQ39188957
Epigenetics. Epigenetic inheritance uncoupled from sequence-specific recruitmentQ39233663
HP1a, Su(var)3-9, SETDB1 and POF stimulate or repress gene expression depending on genomic position, gene length and expression pattern in Drosophila melanogasterQ39987451
Genome-wide profiling of PRC1 and PRC2 Polycomb chromatin binding in Drosophila melanogasterQ40289607
Dynamics and memory of heterochromatin in living cells.Q41940196
Establishment and maintenance of a heterochromatin domainQ44128134
The JIL-1 histone H3S10 kinase regulates dimethyl H3K9 modifications and heterochromatic spreading in DrosophilaQ47072197
Mechanisms of HP1-mediated gene silencing in DrosophilaQ47296769
Chromatin position effects assayed by thousands of reporters integrated in parallelQ47762535
Effects of tethering HP1 to euchromatic regions of the Drosophila genome.Q52604132
Role of Drosophila HP1 in euchromatic gene expression.Q52655216
A chromodomain protein, Swi6, performs imprinting functions in fission yeast during mitosis and meiosisQ73881224
P4510describes a project that usesRStudioQ4798119
limmaQ112236343
P304page(s)43
P577publication date2016-10-18
P1433published inEpigenetics & ChromatinQ15765513
P1476titleHigh-throughput assessment of context-dependent effects of chromatin proteins
P478volume9