Gaining Insight into Exclusive and Common Transcriptomic Features Linked with Biotic Stress Responses in Malus

scientific article published on 13 September 2017

Gaining Insight into Exclusive and Common Transcriptomic Features Linked with Biotic Stress Responses in Malus is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.3389/FPLS.2017.01569
P932PMC publication ID5601412
P698PubMed publication ID28955361

P2093author name stringFederico Martinelli
Tiziano Caruso
Bipin Balan
P2860cites workSystematic and integrative analysis of large gene lists using DAVID bioinformatics resourcesQ27860739
GRAM, a novel domain in glucosyltransferases, myotubularins and other putative membrane-associated proteinsQ28142204
WRKY transcription factorsQ28277183
RNA-Seq analysis reveals candidate genes for ontogenic resistance in Malus-Venturia pathosystemQ28534815
Contrasting mechanisms of defense against biotrophic and necrotrophic pathogensQ29616814
MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processesQ30004199
Comparative Transcriptomes Analysis of Red- and White-Fleshed Apples in an F1 Population of Malus sieversii f. niedzwetzkyana Crossed with M. domestica 'Fuji'.Q30388050
PageMan: an interactive ontology tool to generate, display, and annotate overview graphs for profiling experimentsQ33266932
Evaluation of the hormonal state of columnar apple trees (Malus x domestica) based on high throughput gene expression studiesQ33355029
Jasmonate controls leaf growth by repressing cell proliferation and the onset of endoreduplication while maintaining a potential stand-by modeQ33355374
Infection of apple by apple stem grooving virus leads to extensive alterations in gene expression patterns but no disease symptoms.Q33358268
Auxin control of root development.Q33849355
HISAT: a fast spliced aligner with low memory requirementsQ34043398
Transcriptome profiling of citrus fruit response to huanglongbing diseaseQ34295443
Gene regulatory networks elucidating huanglongbing disease mechanismsQ35004938
Transcriptomic events associated with internal browning of apple during postharvest storageQ35456862
Columnar apple primary roots share some features of the columnar-specific gene expression profile of aerial plant parts as evidenced by RNA-Seq analysisQ35554615
Transcriptomic signatures in seeds of apple (Malus domestica L. Borkh) during fruitlet abscissionQ35579422
Transcriptome-wide identification of salt-responsive members of the WRKY gene family in Gossypium aridumQ35581310
Transcriptome analysis reveals the effects of sugar metabolism and auxin and cytokinin signaling pathways on root growth and development of grafted appleQ35938917
Fire blight disease reactome: RNA-seq transcriptional profile of apple host plant defense responses to Erwinia amylovora pathogen infection.Q36587725
Networking by small-molecule hormones in plant immunity.Q37450759
Transcriptomics Analysis of Apple Leaves in Response to Alternaria alternata Apple Pathotype InfectionQ37595819
NBS-LRR Protein Pik-H4 Interacts with OsBIHD1 to Balance Rice Blast Resistance and Growth by Coordinating Ethylene-Brassinosteroid PathwayQ37625370
Analysis of early host responses for asymptomatic disease detection and management of specialty cropsQ37724935
As above, so below: Auxin's role in lateral organ developmentQ38781664
Picturing pathogen infection in plants.Q38954127
WRKY transcription factors in plant responses to stressesQ39044312
Rhynchophorus ferrugineus attack affects a group of compounds rather than rearranging Phoenix canariensis metabolic pathwaysQ40509347
Proximal sensing of plant-pathogen interactions in spring barley with three fluorescence techniquesQ42047869
NetworkAnalyst--integrative approaches for protein-protein interaction network analysis and visual explorationQ42724540
Transcriptional reprogramming regulated by WRKY18 and WRKY40 facilitates powdery mildew infection of Arabidopsis.Q42782169
Arabidopsis thaliana class-II TGA transcription factors are essential activators of jasmonic acid/ethylene-induced defense responsesQ43260759
Visualization of dynamics of plant-pathogen interaction by novel combination of chlorophyll fluorescence imaging and statistical analysis: differential effects of virulent and avirulent strains of P. syringae and of oxylipins on A. thalianaQ43543960
Chlorophyll Fluorescence Induction in Leaves of Phaseolus vulgaris Infected with Bean Rust (Uromyces appendiculatus).Q45306871
Multicolor fluorescence imaging for early detection of the hypersensitive reaction to tobacco mosaic virusQ45418728
Stress responses in citrus peel: Comparative analysis of host responses to Huanglongbing disease and puffing disorderQ57079269
Changes induced by the Pepper mild mottle tobamovirus on the chloroplast proteome of Nicotiana benthamianaQ61912359
Imaging viral infection: studies on Nicotiana benthamiana plants infected with the pepper mild mottle tobamovirusQ61912366
Physical and functional interactions between pathogen-induced Arabidopsis WRKY18, WRKY40, and WRKY60 transcription factorsQ83128105
P4510describes a project that usesCytoscapeQ3699942
P921main subjecttranscriptomeQ252857
P304page(s)1569
P577publication date2017-09-13
P1433published inFrontiers in Plant ScienceQ27723840
P1476titleGaining Insight into Exclusive and Common Transcriptomic Features Linked with Biotic Stress Responses in Malus
P478volume8

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cites work (P2860)
Q64058017Identification of key genes and its chromosome regions linked to drought responses in leaves across different crops through meta-analysis of RNA-Seq data
Q54255755Identifying Host Molecular Features Strongly Linked With Responses to Huanglongbing Disease in Citrus Leaves.
Q64055097Mapping Gene Markers for Apple Fruit Ring Rot Disease Resistance Using a Multi-omics Approach