Predicting the effect of ions on the conformation of the H-NS dimerization domain

scientific article published on July 2012

Predicting the effect of ions on the conformation of the H-NS dimerization domain is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1016/J.BPJ.2012.05.040
P932PMC publication ID3388213
P698PubMed publication ID22828335
P5875ResearchGate publication ID230564664

P50authorRemus T DameQ38305121
P2093author name stringJocelyne Vreede
P2860cites workChromosomal macrodomains and associated proteins: implications for DNA organization and replication in gram negative bacteriaQ21092425
H-NS oligomerization domain structure reveals the mechanism for high order self-association of the intact proteinQ27640081
The H-NS dimerization domain defines a new fold contributing to DNA recognitionQ27640522
Crystal structure of the N-terminal dimerisation domain of VicH, the H-NS-like protein of Vibrio choleraeQ27642507
Molecular basis of coiled-coil formationQ27644473
H-NS forms a superhelical protein scaffold for DNA condensationQ27664196
GROMACS: fast, flexible, and freeQ27860998
Modeller: generation and refinement of homology-based protein structure modelsQ28236254
Development of an improved four-site water model for biomolecular simulations: TIP4P-EwQ29396077
Prediction and analysis of coiled-coil structuresQ29614391
Canonical sampling through velocity rescalingQ29616131
Single-molecule studies of SNARE complex assembly reveal parallel and antiparallel configurationsQ31031114
Thermodynamics of hydrogen bonding in hydrophilic and hydrophobic mediaQ33235155
Bacterial chromatin organization by H-NS protein unravelled using dual DNA manipulationQ33263766
Domain organization and oligomerization among H-NS-like nucleoid-associated proteins in bacteria.Q33594386
A divalent switch drives H-NS/DNA-binding conformations between stiffening and bridging modes.Q33631136
Temperature regulation of heat-labile enterotoxin (LT) synthesis in Escherichia coli is mediated by an interaction of H-NS protein with the LT A-subunit DNA.Q33734034
Phenotypic analysis of random hns mutations differentiate DNA-binding activity from properties of fimA promoter inversion modulation and bacterial motilityQ33991175
Coiled coils at the edge of configurational heterogeneity. Structural analyses of parallel and antiparallel homotetrameric coiled coils reveal configurational sensitivity to a single solvent-exposed amino acid substitutionQ35607513
Effects of H-NS and potassium glutamate on sigmaS- and sigma70-directed transcription in vitro from osmotically regulated P1 and P2 promoters of proU in Escherichia coliQ35609662
Differential protease-mediated turnover of H-NS and StpA revealed by a mutation altering protein stability and stationary-phase survival of Escherichia coliQ35631720
H-NS: a universal regulator for a dynamic genomeQ35752413
Bacterial nucleoid-associated proteins, nucleoid structure and gene expressionQ37688895
Effects of nucleoid-associated proteins on bacterial chromosome structure and gene expressionQ37800563
Large-scale monitoring of pleiotropic regulation of gene expression by the prokaryotic nucleoid-associated protein, H-NS.Q38302084
Genome-wide identification of H-NS-controlled, temperature-regulated genes in Escherichia coli K-12.Q38358978
H-NS is a part of a thermally controlled mechanism for bacterial gene regulation.Q39497729
H-NS mediated compaction of DNA visualised by atomic force microscopyQ39584438
A role for H-NS in the thermo-osmotic regulation of virulence gene expression in Shigella flexneriQ39932607
The absence of inorganic salt is required for the crystallization of the complete oligomerization domain of Salmonella typhimurium histone-like nucleoid-structuring proteinQ39969385
Increased bending rigidity of single DNA molecules by H-NS, a temperature and osmolarity sensorQ40233805
The Escherichia coli nucleoid protein H-NS functions directly as a transcriptional repressor.Q40872265
Protein-mediated molecular bridging: a key mechanism in biopolymer organizationQ42575832
Oligomerization of the chromatin-structuring protein H-NS.Q50120784
The Major Architects of Chromatin: Architectural Proteins in Bacteria, Archaea and EukaryotesQ58286818
A distinct seven-residue trigger sequence is indispensable for proper coiled-coil formation of the human macrophage scavenger receptor oligomerization domainQ73680507
Environmental control of the in vivo oligomerization of nucleoid protein H-NSQ81515481
P433issue1
P407language of work or nameEnglishQ1860
P304page(s)89-98
P577publication date2012-07-01
P1433published inBiophysical JournalQ2032955
P1476titlePredicting the effect of ions on the conformation of the H-NS dimerization domain
P478volume103

Reverse relations

cites work (P2860)
Q61821275H-NS uses an autoinhibitory conformational switch for environment-controlled gene silencing
Q34606883Interplay of protein and DNA structure revealed in simulations of the lac operon
Q58286734Multidisciplinary perspectives on bacterial genome organization and dynamics
Q39619226Pack it up, pack it in: unraveling H-NS mediated genome packaging

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