| scholarly article | Q13442814 |
| P6179 | Dimensions Publication ID | 1012560036 |
| P356 | DOI | 10.1038/NG.235 |
| P932 | PMC publication ID | 2825711 |
| P698 | PubMed publication ID | 18931682 |
| P5875 | ResearchGate publication ID | 23395273 |
| P50 | author | Aviv Regev | Q4829027 |
| Nir Friedman | Q7039821 | ||
| Tommy Kaplan | Q47452515 | ||
| P2093 | author name string | Ying Liu | |
| Erin K O'Shea | |||
| Naomi Habib | |||
| Andrew P Capaldi | |||
| P2860 | cites work | Epistasis analysis with global transcriptional phenotypes | Q57681849 |
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| Yeast osmosensor Sln1 and plant cytokinin receptor Cre1 respond to changes in turgor pressure | Q27931203 | ||
| Repressors and upstream repressing sequences of the stress-regulated ENA1 gene in Saccharomyces cerevisiae: bZIP protein Sko1p confers HOG-dependent osmotic regulation | Q27931847 | ||
| The transcriptional response of Saccharomyces cerevisiae to osmotic shock. Hot1p and Msn2p/Msn4p are required for the induction of subsets of high osmolarity glycerol pathway-dependent genes. | Q27932310 | ||
| Transcriptional regulatory code of a eukaryotic genome | Q27933887 | ||
| Osmotic stress-induced gene expression in Saccharomyces cerevisiae requires Msn1p and the novel nuclear factor Hot1p | Q27934766 | ||
| Targeting the MEF2-like transcription factor Smp1 by the stress-activated Hog1 mitogen-activated protein kinase | Q27937341 | ||
| Functional discovery via a compendium of expression profiles | Q27938962 | ||
| Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF | Q29547783 | ||
| Signaling and circuitry of multiple MAPK pathways revealed by a matrix of global gene expression profiles | Q29620701 | ||
| Genomewide identification of Sko1 target promoters reveals a regulatory network that operates in response to osmotic stress in Saccharomyces cerevisiae | Q33995626 | ||
| Ordering gene function: the interpretation of epistasis in regulatory hierarchies | Q35281898 | ||
| Unique and Redundant Roles for HOG MAPK Pathway Components as Revealed by Whole-Genome Expression Analysis | Q35796834 | ||
| Yeast osmoregulation | Q36944160 | ||
| Genetic reconstruction of a functional transcriptional regulatory network | Q38302919 | ||
| Redundant roles for the TFIID and SAGA complexes in global transcription | Q38311191 | ||
| Nuclear localization destabilizes the stress-regulated transcription factor Msn2. | Q38335059 | ||
| Analysis of genome-wide histone acetylation state and enzyme binding using DNA microarrays | Q38344585 | ||
| A method for the rapid sequence-independent amplification of microdissected chromosomal material | Q38513770 | ||
| Kinase activity-dependent nuclear export opposes stress-induced nuclear accumulation and retention of Hog1 mitogen-activated protein kinase in the budding yeast Saccharomyces cerevisiae | Q38610444 | ||
| MAP kinase-mediated stress relief that precedes and regulates the timing of transcriptional induction | Q39377615 | ||
| Expression of YAP4 in Saccharomyces cerevisiae under osmotic stress | Q42095555 | ||
| The Saccharomyces cerevisiae Sko1p transcription factor mediates HOG pathway-dependent osmotic regulation of a set of genes encoding enzymes implicated in protection from oxidative damage | Q42505693 | ||
| A dual role for PP1 in shaping the Msn2-dependent transcriptional response to glucose starvation | Q43192523 | ||
| Genome-wide expression analyses: Metabolic adaptation of Saccharomyces cerevisiae to high sugar stress | Q44441734 | ||
| Co-operative interactions during protein folding. | Q52422547 | ||
| P433 | issue | 11 | |
| P407 | language of work or name | English | Q1860 |
| P304 | page(s) | 1300-1306 | |
| P577 | publication date | 2008-10-19 | |
| P1433 | published in | Nature Genetics | Q976454 |
| P1476 | title | Structure and function of a transcriptional network activated by the MAPK Hog1. | |
| P478 | volume | 40 |
| Q91761532 | A constitutive active allele of the transcription factor Msn2 mimicking low PKA activity dictates metabolic remodeling in yeast |
| Q41505408 | A functional selection model explains evolutionary robustness despite plasticity in regulatory networks |
| Q89738645 | A genetic analysis reveals novel histone residues required for transcriptional reprogramming upon stress |
| Q27930513 | A haploproficient interaction of the transaldolase paralogue NQM1 with the transcription factor VHR1 affects stationary phase survival and oxidative stress resistance |
| Q35877649 | A high-resolution gene expression atlas of epistasis between gene-specific transcription factors exposes potential mechanisms for genetic interactions. |
| Q42020759 | A high-throughput chromatin immunoprecipitation approach reveals principles of dynamic gene regulation in mammals |
| Q34390468 | A network-based approach for predicting missing pathway interactions |
| Q38254915 | A novel role for lncRNAs in cell cycle control during stress adaptation |
| Q42291798 | A prior-based integrative framework for functional transcriptional regulatory network inference |
| Q28484050 | A self-organized model for cell-differentiation based on variations of molecular decay rates |
| Q42283045 | A synthetic biology approach to probing nucleosome symmetry. |
| Q41431790 | Analysis of Gene Function Using DNA Microarrays |
| Q27931485 | Casein kinase II regulation of the Hot1 transcription factor promotes stochastic gene expression |
| Q35541099 | Combinatorial code governing cellular responses to complex stimuli |
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| Q36243717 | Condition-specific genetic interaction maps reveal crosstalk between the cAMP/PKA and the HOG MAPK pathways in the activation of the general stress response |
| Q27932241 | Control of Cdc28 CDK1 by a stress-induced lncRNA |
| Q27940376 | Control of Ubp3 ubiquitin protease activity by the Hog1 SAPK modulates transcription upon osmostress. |
| Q37952115 | Controlling gene expression in response to stress. |
| Q27938503 | Dcp2 phosphorylation by Ste20 modulates stress granule assembly and mRNA decay in Saccharomyces cerevisiae |
| Q35051446 | De novo characterization of the Anthurium transcriptome and analysis of its digital gene expression under cold stress |
| Q40525311 | Deciphering dynamic dose responses of natural promoters and single cis elements upon osmotic and oxidative stress in yeast |
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| Q33349770 | Digital gene expression signatures for maize development. |
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| Q35836166 | Dynamic processes at stress promoters regulate the bimodal expression of HOG response genes. |
| Q30498341 | Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast |
| Q39800086 | Elongating under Stress. |
| Q33718817 | Enhancing Stress Resistance and Production Phenotypes Through Transcriptome Engineering |
| Q37083500 | Environmental and genetic perturbations reveal different networks of metabolic regulation |
| Q27347312 | Epistasis of transcriptomes reveals synergism between transcriptional activators Hnf1alpha and Hnf4alpha |
| Q33732357 | Evolution of reduced co-activator dependence led to target expansion of a starvation response pathway |
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| Q42713526 | Functional overlap and regulatory links shape genetic interactions between signaling pathways. |
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| Q37533285 | Genome-wide transcriptional profiling and enrichment mapping reveal divergent and conserved roles of Sko1 in the Candida albicans osmotic stress response |
| Q36745168 | Global Epitranscriptomics Profiling of RNA Post-Transcriptional Modifications as an Effective Tool for Investigating the Epitranscriptomics of Stress Response |
| Q41193818 | H3K4 monomethylation dictates nucleosome dynamics and chromatin remodeling at stress-responsive genes |
| Q35955078 | HD2C interacts with HDA6 and is involved in ABA and salt stress response in Arabidopsis. |
| Q42705213 | Heat stress induces expression of HSP genes in genetically divergent chickens. |
| Q33916249 | High throughput determination of TGFβ1/SMAD3 targets in A549 lung epithelial cells |
| Q34594554 | High-throughput chromatin immunoprecipitation for genome-wide mapping of in vivo protein-DNA interactions and epigenomic states |
| Q30838073 | High-throughput single-cell analysis for the proteomic dynamics study of the yeast osmotic stress response |
| Q27933955 | Hog1 bypasses stress-mediated down-regulation of transcription by RNA polymerase II redistribution and chromatin remodeling |
| Q42321727 | Hog1 controls global reallocation of RNA Pol II upon osmotic shock in Saccharomyces cerevisiae |
| Q24609000 | Identification of transcriptional regulators in the mouse immune system |
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| Q56892143 | Induction and transcriptional regulation of the co-inhibitory gene module in T cells |
| Q38763605 | Inference and Evolutionary Analysis of Genome-Scale Regulatory Networks in Large Phylogenies |
| Q36434090 | Inhibitory Role of Greatwall-Like Protein Kinase Rim15p in Alcoholic Fermentation via Upregulating the UDP-Glucose Synthesis Pathway in Saccharomyces cerevisiae. |
| Q92509232 | Integrated TORC1 and PKA signaling control the temporal activation of glucose-induced gene expression in yeast |
| Q35079119 | Integrated approaches reveal determinants of genome-wide binding and function of the transcription factor Pho4. |
| Q35022270 | Integrated module and gene-specific regulatory inference implicates upstream signaling networks |
| Q51831028 | Knocking sense into regulatory pathways. |
| Q35635739 | Large-scale discovery of enhancers from human heart tissue |
| Q36580599 | Linking the signaling cascades and dynamic regulatory networks controlling stress responses |
| Q45342923 | Modeling liquid association |
| Q35991607 | Moment-based inference predicts bimodality in transient gene expression. |
| Q41323306 | Msn2 coordinates a stoichiometric gene expression program |
| Q90236994 | Multi-kinase control of environmental stress responsive transcription |
| Q37639890 | Multilayered control of gene expression by stress-activated protein kinases. |
| Q37290040 | New Genes Involved in Osmotic Stress Tolerance in Saccharomyces cerevisiae |
| Q36926671 | Noise and interlocking signaling pathways promote distinct transcription factor dynamics in response to different stresses. |
| Q90074064 | Nut1/Hos1 and Sas2/Rpd3 control the H3 acetylation of two different sets of osmotic stress-induced genes |
| Q34356274 | One Hand Clapping: detection of condition-specific transcription factor interactions from genome-wide gene activity data |
| Q28535284 | Osmostress-induced cell volume loss delays yeast Hog1 signaling by limiting diffusion processes and by Hog1-specific effects |
| Q46331480 | Oxidative Stress Response Tips the Balance in Aspergillus terreus Amphotericin B Resistance. |
| Q92188267 | PKA and HOG signaling contribute separable roles to anaerobic xylose fermentation in yeast engineered for biofuel production |
| Q27937397 | Pathway connectivity and signaling coordination in the yeast stress-activated signaling network. |
| Q34547509 | Perturb-Seq: Dissecting Molecular Circuits with Scalable Single-Cell RNA Profiling of Pooled Genetic Screens |
| Q42605585 | Physical Module Networks: an integrative approach for reconstructing transcription regulation |
| Q41011355 | Polymerases ε and ∂ repair dysfunctional telomeres facilitated by salt |
| Q36093899 | Predictive regulatory models in Drosophila melanogaster by integrative inference of transcriptional networks |
| Q51738049 | Protection mechanisms against aberrant metabolism of sphingolipids in budding yeast. |
| Q46246140 | Protective role of the HOG pathway against the growth defect caused by impaired biosynthesis of complex sphingolipids in yeast Saccharomyces cerevisiae. |
| Q28478118 | Quantitative epistasis analysis and pathway inference from genetic interaction data |
| Q28477071 | Quantitative models of the mechanisms that control genome-wide patterns of transcription factor binding during early Drosophila development |
| Q27319875 | Real-time quantification of protein expression at the single-cell level via dynamic protein synthesis translocation reporters. |
| Q52727060 | Reconstructing a metazoan genetic pathway with transcriptome-wide epistasis measurements. |
| Q33586796 | Reconstruction of the yeast protein-protein interaction network involved in nutrient sensing and global metabolic regulation |
| Q40863715 | Response of yeast cells to high glucose involves molecular and physiological differences when compared to other osmostress conditions. |
| Q38048770 | Response to hyperosmotic stress |
| Q61445776 | Role of the highly conserved G68 residue in the yeast phosphorelay protein Ypd1: implications for interactions between histidine phosphotransfer (HPt) and response regulator proteins |
| Q34454205 | Role of the repressor Oaf3p in the recruitment of transcription factors and chromatin dynamics during the oleate response |
| Q30783799 | Selection of higher order regression models in the analysis of multi-factorial transcription data |
| Q47895835 | Sensitivity estimation for stochastic models of biochemical reaction networks in the presence of extrinsic variability |
| Q30538482 | Severe osmotic compression triggers a slowdown of intracellular signaling, which can be explained by molecular crowding |
| Q30572790 | Signal-dependent dynamics of transcription factor translocation controls gene expression |
| Q96639958 | Single-particle imaging of stress-promoters induction reveals the interplay between MAPK signaling, chromatin and transcription factors |
| Q36391336 | Snf1/AMPK promotes the formation of Kog1/Raptor-bodies to increase the activation threshold of TORC1 in budding yeast |
| Q34336735 | State transitions in the TORC1 signaling pathway and information processing in Saccharomyces cerevisiae |
| Q37957690 | Strategies to discover regulatory circuits of the mammalian immune system |
| Q64230557 | Sumoylation of DNA-bound transcription factor Sko1 prevents its association with nontarget promoters |
| Q91770432 | Synthesizing Signaling Pathways from Temporal Phosphoproteomic Data |
| Q41636997 | The Hog1 SAPK controls the Rtg1/Rtg3 transcriptional complex activity by multiple regulatory mechanisms |
| Q35065482 | The Hog1 mitogen-activated protein kinase mediates a hypoxic response in Saccharomyces cerevisiae |
| Q42155215 | The Hog1 stress-activated protein kinase targets nucleoporins to control mRNA export upon stress |
| Q34312689 | The Saccharomyces cerevisiae Hot1p regulated gene YHR087W (HGI1) has a role in translation upon high glucose concentration stress |
| Q64915566 | The ability of transcription factors to differentially regulate gene expression is a crucial component of the mechanism underlying inversion, a frequently observed genetic interaction pattern. |
| Q30836490 | The comprehensive transcriptional analysis in Caenorhabditis elegans by integrating ChIP-seq and gene expression data |
| Q94445608 | The coordinate actions of calcineurin and Hog1 mediate the stress response through multiple nodes of the cell cycle network |
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