Interclonal gradient of virulence in the Pseudomonas aeruginosa pangenome from disease and environment.

scientific article published on 29 September 2014

Interclonal gradient of virulence in the Pseudomonas aeruginosa pangenome from disease and environment. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1111/1462-2920.12606
P8608Fatcat IDrelease_u6t3mqfaifgado6m5rueztbgqa
P698PubMed publication ID25156090
P5875ResearchGate publication ID265054531

P50authorAntje MunderQ55865213
Alexander GoesmannQ52422599
P2093author name stringErich Gulbins
Burkhard Tümmler
Jens Klockgether
Lutz Wiehlmann
Colin F Davenport
Philippe Chouvarine
Huiming Peng
Rolf Hilker
Sebastian Fischer
Nina Cramer
Oliver Türk
Sarah Dethlefsen
Torben Schönfelder
Florian Wölbeling
Patricia Moran Losada
P2860cites workComplete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogenQ22122393
Pseudomonas Genome Database: improved comparative analysis and population genomics capability for Pseudomonas genomesQ24609340
Dynamics of Pseudomonas aeruginosa genome evolutionQ24652525
Fast and accurate short read alignment with Burrows-Wheeler transformQ24653853
Velvet: algorithms for de novo short read assembly using de Bruijn graphsQ24657623
From gene trees to organismal phylogeny in prokaryotes: the case of the gamma-ProteobacteriaQ24795892
Pouring salt on a wound: Pseudomonas aeruginosa virulence factors alter Na+ and Cl- flux in the lungQ27001070
The Sequence Alignment/Map format and SAMtoolsQ27860966
Pseudomonas aeruginosa Genomic Structure and DiversityQ28244678
Integrative Genomics Viewer (IGV): high-performance genomics data visualization and explorationQ28264933
Lung function and inflammation during murine Pseudomonas aeruginosa airway infection.Q54190113
Protein sequence databasesQ56766287
Common Virulence Factors for Bacterial Pathogenicity in Plants and AnimalsQ28292772
Stampy: a statistical algorithm for sensitive and fast mapping of Illumina sequence readsQ28296838
Newly introduced genomic prophage islands are critical determinants of in vivo competitiveness in the Liverpool Epidemic Strain of Pseudomonas aeruginosaQ28492507
Regulatory role of PopN and its interacting partners in type III secretion of Pseudomonas aeruginosaQ28493109
BEDTools: a flexible suite of utilities for comparing genomic featuresQ29547332
Prodigal: prokaryotic gene recognition and translation initiation site identificationQ29547611
A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3Q29614852
eBURST: inferring patterns of evolutionary descent among clusters of related bacterial genotypes from multilocus sequence typing dataQ29617369
Pseudomonas aeruginosa population structure revisitedQ30913394
Evolution of microbes and viruses: a paradigm shift in evolutionary biology?Q31095701
Intraclonal genome diversity of Pseudomonas aeruginosa clones CHA and TBQ31121749
Genomic analysis reveals that Pseudomonas aeruginosa virulence is combinatorialQ33260281
Multiple roles of Pseudomonas aeruginosa TBCF10839 PilY1 in motility, transport and infection.Q33389371
EDGAR: a software framework for the comparative analysis of prokaryotic genomesQ33449008
In-vivo expression profiling of Pseudomonas aeruginosa infections reveals niche-specific and strain-independent transcriptional programs.Q34023318
Bacteriophage genes that inactivate the CRISPR/Cas bacterial immune system.Q34034778
Plant immunity triggered by microbial molecular signaturesQ34131515
Molecular epidemiology of chronic Pseudomonas aeruginosa airway infections in cystic fibrosisQ34500683
The peptide chain release factor methyltransferase PrmC is essential for pathogenicity and environmental adaptation of Pseudomonas aeruginosa PA14.Q34528471
Population structure of Pseudomonas aeruginosaQ35808921
Diversity of the abundant pKLC102/PAGI-2 family of genomic islands in Pseudomonas aeruginosa.Q35855373
Multilocus sequence typing of bacteriaQ36506797
Pseudomonas aeruginosa Cif protein enhances the ubiquitination and proteasomal degradation of the transporter associated with antigen processing (TAP) and reduces major histocompatibility complex (MHC) class I antigen presentation.Q37428607
Differential adaptation of microbial pathogens to airways of patients with cystic fibrosis and chronic obstructive pulmonary diseaseQ37768211
Differential potentiation of the virulence of the Pseudomonas aeruginosa cystic fibrosis liverpool epidemic strain by oral commensal StreptococciQ39070624
GenDB--an open source genome annotation system for prokaryote genomesQ39747829
The sensor kinase PhoQ mediates virulence in Pseudomonas aeruginosaQ39879252
r2cat: synteny plots and comparative assemblyQ41857690
Assessing Pseudomonas virulence with nonmammalian host: Galleria mellonella.Q42003544
ReadXplorer--visualization and analysis of mapped sequencesQ42260590
Identification of the biosynthetic gene cluster for the Pseudomonas aeruginosa antimetabolite L-2-amino-4-methoxy-trans-3-butenoic acidQ42269732
Worldwide distribution of Pseudomonas aeruginosa clone C strains in the aquatic environment and cystic fibrosis patientsQ43322876
Exact and complete short-read alignment to microbial genomes using Graphics Processing Unit programmingQ43918351
The MexGHI-OpmD multidrug efflux pump controls growth, antibiotic susceptibility and virulence in Pseudomonas aeruginosa via 4-quinolone-dependent cell-to-cell communicationQ46427797
Extraction and measurement of NAD(P)(+) and NAD(P)H.Q46895222
Modeling Pseudomonas aeruginosa pathogenesis in plant hosts.Q48860089
Pseudomonas aeruginosa population structure revisited under environmental focus: impact of water quality and phage pressure.Q51569454
How to optimize the drop plate method for enumerating bacteria.Q52068829
P433issue1
P921main subjectPseudomonas aeruginosaQ31856
P304page(s)29-46
P577publication date2014-09-29
P1433published inEnvironmental MicrobiologyQ15752447
P1476titleInterclonal gradient of virulence in the Pseudomonas aeruginosa pangenome from disease and environment
P478volume17

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cites work (P2860)
Q40899329A novel protein quality control mechanism contributes to heat shock resistance of worldwide-distributed Pseudomonas aeruginosa clone C strains
Q57468600A novel subfamily of bacterial AAT-fold basic amino acid decarboxylases and functional characterization of its first representative: Pseudomonas aeruginosa LdcA
Q37278146Characterization and Comparative Genomic Analyses of Pseudomonas aeruginosa Phage PaoP5: New Members Assigned to PAK_P1-like Viruses
Q58556357Characterization and Genomic Analyses of Podovirus TC6: Establishment of Genus
Q31008319Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortium
Q61798706Comparative Genomic Analyses Reveal Core-Genome-Wide Genes Under Positive Selection and Major Regulatory Hubs in Outlier Strains of Pseudomonas aeruginosa
Q60511530Comparative Genomics of Nonoutbreak Pseudomonas aeruginosa Strains Underlines Genome Plasticity and Geographic Relatedness of the Global Clone ST235
Q40442905Comparative analysis of the volatile metabolomes of Pseudomonas aeruginosa clinical isolates
Q35880930Comparative genomics and biological characterization of sequential Pseudomonas aeruginosa isolates from persistent airways infection.
Q36363744Complete Genome Sequence of Pseudomonas aeruginosa PA1, Isolated from a Patient with a Respiratory Tract Infection
Q52566048Coping with Environmental Eukaryotes; Identification of Pseudomonas syringae Genes during the Interaction with Alternative Hosts or Predators.
Q40508725Determinants for persistence of Pseudomonas aeruginosa in hospitals: interplay between resistance, virulence and biofilm formation.
Q40142398Diversity, Prevalence, and Longitudinal Occurrence of Type II Toxin-Antitoxin Systems of Pseudomonas aeruginosa Infecting Cystic Fibrosis Lungs
Q38417030Evolutionary insight from whole-genome sequencing of Pseudomonas aeruginosa from cystic fibrosis patients
Q47108293Exolysin Shapes the Virulence of Pseudomonas aeruginosa Clonal Outliers.
Q36948730Genomic Rearrangements and Functional Diversification of lecA and lecB Lectin-Coding Regions Impacting the Efficacy of Glycomimetics Directed against Pseudomonas aeruginosa
Q35792181Habitat-associated skew of clone abundance in the Pseudomonas aeruginosa population
Q40785146Insect pathogenicity in plant-beneficial pseudomonads: phylogenetic distribution and comparative genomics.
Q64448239Insertion sequences drive the emergence of a highly adapted human pathogen
Q38978571Insights into host-pathogen interactions from state-of-the-art animal models of respiratory Pseudomonas aeruginosa infections
Q35595533Integrated whole-genome screening for Pseudomonas aeruginosa virulence genes using multiple disease models reveals that pathogenicity is host specific.
Q36762228Intraclonal genome diversity of the major Pseudomonas aeruginosa clones C and PA14.
Q28600977Microbial Dysbiosis: Rethinking Disease in Marine Ecosystems
Q97521052Molecular Characterization and Comparative Genomic Analysis of vB_PaeP_YA3, a Novel Temperate Bacteriophage of Pseudomonas aeruginosa
Q40559371Molecular Epidemiology of Mutations in Antimicrobial Resistance Loci of Pseudomonas aeruginosa Isolates from Airways of Cystic Fibrosis Patients
Q51643583Mutations in NalC induce MexAB-OprM overexpression resulting in high level of aztreonam resistance in environmental isolates of Pseudomonas aeruginosa.
Q40130929Oxygen-dependent regulation of c-di-GMP synthesis by SadC controls alginate production in Pseudomonas aeruginosa.
Q35891241Pangenome-wide and molecular evolution analyses of the Pseudomonas aeruginosa species.
Q40777839Phenotype and toxicity of the recently discovered exlA-positive Pseudomonas aeruginosa strains collected worldwide.
Q38900619Pseudomonas aeruginosa renews its virulence factors
Q39331856ReadXplorer 2-detailed read mapping analysis and visualization from one single source.
Q40099481Recent advances in understanding Pseudomonas aeruginosa as a pathogen
Q30253025Reconstruction of the metabolic network of Pseudomonas aeruginosa to interrogate virulence factor synthesis
Q92864466Repair Process Impairment by Pseudomonas aeruginosa in Epithelial Tissues: Major Features and Potential Therapeutic Avenues
Q39323554SNP synteny analysis of Staphylococcus aureus and Pseudomonas aeruginosa population genomics
Q90496595Single-nucleotide polymorphism-based genetic diversity analysis of clinical Pseudomonas aeruginosa isolates
Q92581338The Population Structure of Pseudomonas aeruginosa Is Characterized by Genetic Isolation of exoU+ and exoS+ Lineages
Q47642019The Pseudomonas aeruginosa ExoY phenotype of high-copy-number recombinants is not detectable in natural isolates.
Q36143642The Widespread Multidrug-Resistant Serotype O12 Pseudomonas aeruginosa Clone Emerged through Concomitant Horizontal Transfer of Serotype Antigen and Antibiotic Resistance Gene Clusters
Q89252326The biotechnological potential of marine bacteria in the novel lineage of Pseudomonas pertucinogena
Q47854682Three-base periodicity of sites of sequence variation in Pseudomonas aeruginosa and Staphylococcus aureus core genomes
Q27327207VarR controls colonization and virulence in the marine macroalgal pathogen Nautella italica R11.
Q40532616Variation of Burkholderia cenocepacia virulence potential during cystic fibrosis chronic lung infection.
Q35813781Within-host microevolution of Pseudomonas aeruginosa in Italian cystic fibrosis patients

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