| scholarly article | Q13442814 |
| P6179 | Dimensions Publication ID | 1045624030 |
| P356 | DOI | 10.1186/GB-2012-13-3-R19 |
| P932 | PMC publication ID | 3439970 |
| P698 | PubMed publication ID | 22439894 |
| P5875 | ResearchGate publication ID | 221968730 |
| P50 | author | Aziz A. Aboobaker | Q54206627 |
| Jordi Solana | Q41780109 | ||
| P2093 | author name string | Sunir Malla | |
| Damian Kao | |||
| Farah Jaber-Hijazi | |||
| Ray Wilson | |||
| Yuliana Mihaylova | |||
| P2860 | cites work | The function and regulation of vasa-like genes in germ-cell development | Q21194898 |
| Mapping and quantifying mammalian transcriptomes by RNA-Seq | Q22122035 | ||
| Gene ontology: tool for the unification of biology | Q23781406 | ||
| De novo assembly and validation of planaria transcriptome by massive parallel sequencing and shotgun proteomics | Q24598325 | ||
| Dynamic transcriptomes during neural differentiation of human embryonic stem cells revealed by short, long, and paired-end sequencing | Q24620865 | ||
| An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells | Q24644795 | ||
| RNA granules | Q24683783 | ||
| Basic local alignment search tool | Q25938991 | ||
| The TALE class homeobox gene Smed-prep defines the anterior compartment for head regeneration | Q27347706 | ||
| RNA granules: post-transcriptional and epigenetic modulators of gene expression | Q28245899 | ||
| Bruno acts as a dual repressor of oskar translation, promoting mRNA oligomerization and formation of silencing particles | Q28296497 | ||
| The RNA recognition motif, a plastic RNA-binding platform to regulate post-transcriptional gene expression | Q29616445 | ||
| KAAS: an automatic genome annotation and pathway reconstruction server | Q29617232 | ||
| The maintenance and regeneration of the planarian excretory system are regulated by EGFR signaling | Q30503349 | ||
| An MCM2-related gene is expressed in proliferating cells of intact and regenerating planarians | Q30887114 | ||
| Ontologizer 2.0--a multifunctional tool for GO term enrichment analysis and data exploration | Q31156999 | ||
| Alternative splicing events identified in human embryonic stem cells and neural progenitors | Q33304209 | ||
| A dual platform approach to transcript discovery for the planarian Schmidtea mediterranea to establish RNAseq for stem cell and regeneration biology | Q33778543 | ||
| A proteomics approach to decipher the molecular nature of planarian stem cells | Q33831051 | ||
| SMEDWI-2 is a PIWI-like protein that regulates planarian stem cells | Q48111456 | ||
| The body margin of the planarian Dugesia japonica: characterization by the expression of an intermediate filament gene | Q48285199 | ||
| Observations on the ultrastructure of nerve cells in the brain of the planarian, Dugesia gonocephala | Q51250901 | ||
| The planarian nanos-like gene Smednos is expressed in germline and eye precursor cells during development and regeneration | Q51759170 | ||
| Different requirements for conserved post-transcriptional regulators in planarian regeneration and stem cell maintenance | Q51912877 | ||
| Silencing of Smed-betacatenin1 generates radial-like hypercephalized planarians. | Q51963787 | ||
| DjCBC-1, a conserved DEAD box RNA helicase of the RCK/p54/Me31B family, is a component of RNA-protein complexes in planarian stem cells and neurons | Q51972700 | ||
| smedinx-11 is a planarian stem cell gap junction gene required for regeneration and homeostasis | Q51979505 | ||
| An in situ hybridization protocol for planarian embryos: monitoring myosin heavy chain gene expression. | Q52044695 | ||
| Distribution of the stem cells (neoblasts) in the planarian Dugesia japonica. | Q54684647 | ||
| Tudor Domain | Q58067129 | ||
| Noggin and Noggin-Like Genes Control Dorsoventral Axis Regeneration in Planarians | Q58484180 | ||
| Bromodeoxyuridine Specifically Labels the Regenerative Stem Cells of Planarians | Q58632945 | ||
| Identification and origin of the germline stem cells as revealed by the expression of nanos-related gene in planarians | Q61447953 | ||
| Fine structure studies on the planarian, Dugesia. I. Nature of the "neoblast" and other cell types in noninjured worms | Q66910234 | ||
| Gene annotation and pathway mapping in KEGG | Q79913927 | ||
| Smed-SmB, a member of the LSm protein superfamily, is essential for chromatoid body organization and planarian stem cell proliferation | Q83160892 | ||
| Alternative splicing regulates mouse embryonic stem cell pluripotency and differentiation | Q33935135 | ||
| Diversification of stem cell molecular repertoire by alternative splicing. | Q34063436 | ||
| Building RNA-protein granules: insight from the germline | Q34087911 | ||
| Planarian stem cells: a simple paradigm for regeneration. | Q34167037 | ||
| An alternative splicing switch regulates embryonic stem cell pluripotency and reprogramming | Q34216981 | ||
| The planarian Schmidtea mediterranea as a model for epigenetic germ cell specification: analysis of ESTs from the hermaphroditic strain | Q34234893 | ||
| The planarian flatworm: an in vivo model for stem cell biology and nervous system regeneration | Q34458772 | ||
| Dendritic protein synthesis, synaptic plasticity, and memory | Q34571206 | ||
| Pathway to totipotency: lessons from germ cells | Q34585032 | ||
| Tracing the derivation of embryonic stem cells from the inner cell mass by single-cell RNA-Seq analysis | Q34619418 | ||
| The biogenesis and function of PIWI proteins and piRNAs: progress and prospect | Q34990505 | ||
| nanos function is essential for development and regeneration of planarian germ cells. | Q35749561 | ||
| Deciphering the molecular machinery of stem cells: a look at the neoblast gene expression profile | Q35850349 | ||
| Double-stranded RNA specifically disrupts gene expression during planarian regeneration | Q36336691 | ||
| SmedGD: the Schmidtea mediterranea genome database | Q36454142 | ||
| Neuronal RNA granules: movers and makers | Q36597037 | ||
| The PIWI proteins SMEDWI-2 and SMEDWI-3 are required for stem cell function and piRNA expression in planarians. | Q36666293 | ||
| Multiple layers of molecular controls modulate self-renewal and neuronal lineage specification of embryonic stem cells | Q37218554 | ||
| High-resolution profiling and discovery of planarian small RNAs. | Q37245059 | ||
| The genetics of induced pluripotency | Q37552349 | ||
| Systematic analysis of posttranscriptional gene expression | Q37787996 | ||
| The transcriptional and signalling networks of pluripotency | Q37871828 | ||
| From unwinding to clamping - the DEAD box RNA helicase family | Q37903659 | ||
| DjPum, a homologue of Drosophila Pumilio, is essential to planarian stem cell maintenance | Q38329325 | ||
| Smed454 dataset: unravelling the transcriptome of Schmidtea mediterranea | Q38503841 | ||
| The Mi-2-like Smed-CHD4 gene is required for stem cell differentiation in the planarian Schmidtea mediterranea | Q39849555 | ||
| Allometric scaling and proportion regulation in the freshwater planarian Schmidtea mediterranea | Q40674057 | ||
| The use of lectins as markers for differentiated secretory cells in planarians. | Q41219172 | ||
| Spoltud-1 is a chromatoid body component required for planarian long-term stem cell self-renewal | Q41780026 | ||
| Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea | Q41854853 | ||
| Molecular analysis of stem cells and their descendants during cell turnover and regeneration in the planarian Schmidtea mediterranea | Q41922401 | ||
| Regeneration and maintenance of the planarian midline is regulated by a slit orthologue. | Q42123378 | ||
| Beta-catenin defines head versus tail identity during planarian regeneration and homeostasis | Q42142686 | ||
| Planarian regeneration involves distinct stem cell responses to wounds and tissue absence | Q42413468 | ||
| Morphogenesis defects are associated with abnormal nervous system regeneration following roboA RNAi in planarians | Q42610077 | ||
| A novel invertebrate trophic factor related to invertebrate neurotrophins is involved in planarian body regional survival and asexual reproduction. | Q44249648 | ||
| Diverse miRNA spatial expression patterns suggest important roles in homeostasis and regeneration in planarians. | Q44656131 | ||
| Chromatoid bodies in somatic cells of the planarian: observations on their behavior during mitosis | Q45277292 | ||
| The role of Tudor domains in germline development and polar granule architecture | Q47070085 | ||
| A Bruno-like gene is required for stem cell maintenance in planarians | Q48085602 | ||
| P4510 | describes a project that uses | RNA interference | Q201993 |
| ImageJ | Q1659584 | ||
| P433 | issue | 3 | |
| P921 | main subject | RNA interference | Q201993 |
| pluripotency | Q1894941 | ||
| RNA sequencing | Q2542347 | ||
| P304 | page(s) | R19 | |
| P577 | publication date | 2012-01-01 | |
| P1433 | published in | Genome Biology | Q5533480 |
| P1476 | title | Defining the molecular profile of planarian pluripotent stem cells using a combinatorial RNAseq, RNA interference and irradiation approach | |
| P478 | volume | 13 |
| Q42695832 | A C-terminally truncated form of β-catenin acts as a novel regulator of Wnt/β-catenin signaling in planarians. |
| Q41829171 | A comparative transcriptomic analysis reveals conserved features of stem cell pluripotency in planarians and mammals |
| Q35804225 | A functional genomics screen identifies an Importin-α homolog as a regulator of stem cell function and tissue patterning during planarian regeneration. |
| Q42209683 | A lack of commitment for over 500 million years: conserved animal stem cell pluripotency. |
| Q42358727 | A mex3 homolog is required for differentiation during planarian stem cell lineage development |
| Q36652300 | Adult somatic stem cells in the human parasite Schistosoma mansoni |
| Q27013028 | Advanced Applications of RNA Sequencing and Challenges |
| Q40385926 | Antimicrobial capacity of the freshwater planarians against S. aureus is under the control of Timeless |
| Q52315063 | Cell type atlas and lineage tree of a whole complex animal by single-cell transcriptomics |
| Q38487550 | Characterization of the early events leading to totipotency in an Arabidopsis protoplast liquid culture by temporal transcript profiling |
| Q41046219 | Closing the circle of germline and stem cells: the Primordial Stem Cell hypothesis. |
| Q58759711 | Conservation of epigenetic regulation by the MLL3/4 tumour suppressor in planarian pluripotent stem cells |
| Q37162242 | Conserved functional antagonism of CELF and MBNL proteins controls stem cell-specific alternative splicing in planarians |
| Q64389600 | DNA damage and tissue repair: What we can learn from planaria |
| Q30946349 | Digital gene expression approach over multiple RNA-Seq data sets to detect neoblast transcriptional changes in Schmidtea mediterranea |
| Q48609218 | DrRad51 is required for chiasmata formation in meiosis in planarian Dugesia ryukyuensis |
| Q30837695 | Embryonic origin of adult stem cells required for tissue homeostasis and regeneration. |
| Q46249270 | EvoRegen in Animals: Time to uncover deep conservation or convergence of adult stem cell evolution and regenerative processes |
| Q35923044 | Feedback control in planarian stem cell systems. |
| Q30617929 | Functional analysis of Girardia tigrina transcriptome seeds pipeline for anthelmintic target discovery |
| Q42008240 | Girardia dorotocephala transcriptome sequence, assembly, and validation through characterization of piwi homologs and stem cell progeny markers |
| Q36804046 | Heterochromatin protein 1 promotes self-renewal and triggers regenerative proliferation in adult stem cells |
| Q48193397 | Hippo signaling controls cell cycle and restricts cell plasticity in planarians. |
| Q37371776 | Identification of neoblast- and regeneration-specific miRNAs in the planarian Schmidtea mediterranea. |
| Q90622906 | Insights into Germline Development and Differentiation in Molluscs and Reptiles: The Use of Molecular Markers in the Study of Non-model Animals |
| Q27315197 | JNK controls the onset of mitosis in planarian stem cells and triggers apoptotic cell death required for regeneration and remodeling |
| Q40848483 | JNK signalling is necessary for a Wnt- and stem cell-dependent regeneration programme. |
| Q35925608 | Mass Spectrometry Imaging and Identification of Peptides Associated with Cephalic Ganglia Regeneration in Schmidtea mediterranea |
| Q88107247 | Neoblast-enriched zinc finger protein FIR1 triggers local proliferation during planarian regeneration |
| Q30587101 | On-chip immobilization of planarians for in vivo imaging |
| Q42167640 | PBX/extradenticle is required to re-establish axial structures and polarity during planarian regeneration. |
| Q33796234 | PIWI homologs mediate histone H4 mRNA localization to planarian chromatoid bodies |
| Q26823327 | Piwi and potency: PIWI proteins in animal stem cells and regeneration |
| Q35844590 | PlanMine--a mineable resource of planarian biology and biodiversity |
| Q47304367 | PlanNET: Homology-based predicted interactome for multiple planarian transcriptomes |
| Q42132465 | Planarian MBD2/3 is required for adult stem cell pluripotency independently of DNA methylation |
| Q89511615 | Poly(ADP-Ribose) Polymerase-3 Regulates Regeneration in Planarians |
| Q35564194 | Protein expression profiling in head fragments during planarian regeneration after amputation |
| Q41905469 | RNA interference by feeding in vitro–synthesized double‐stranded RNA to planarians: Methodology and dynamics |
| Q26795698 | Recent advances in Echinococcus genomics and stem cell research |
| Q83227566 | Region-specific regulation of stem cell-driven regeneration in tapeworms |
| Q36921146 | Regional signals in the planarian body guide stem cell fate in the presence of genomic instability. |
| Q40164515 | Set1 and MLL1/2 Target Distinct Sets of Functionally Different Genomic Loci In Vivo |
| Q41990372 | Single-cell analysis reveals functionally distinct classes within the planarian stem cell compartment |
| Q47156169 | Small RNAome sequencing delineates the small RNA landscape of pluripotent adult stem cells in the planarian Schmidtea mediterranea. |
| Q34131963 | Smed-dynA-1 is a planarian nervous system specific dynamin 1 homolog required for normal locomotion |
| Q26829049 | Specialized progenitors and regeneration |
| Q40232763 | Staphylococcus aureus Promotes Smed-PGRP-2/Smed-setd8-1 Methyltransferase Signalling in Planarian Neoblasts to Sensitize Anti-bacterial Gene Responses During Re-infection |
| Q36827545 | Stem cell progeny contribute to the schistosome host-parasite interface. |
| Q36554663 | Stem cell systems and regeneration in planaria |
| Q57296132 | Temperature affects the biology of Schmidtea mediterranea |
| Q27318426 | The CCR4-NOT complex mediates deadenylation and degradation of stem cell mRNAs and promotes planarian stem cell differentiation |
| Q60952331 | The Integrator complex regulates differential snRNA processing and fate of adult stem cells in the highly regenerative planarian Schmidtea mediterranea |
| Q37232308 | The NuRD complex component p66 suppresses photoreceptor neuron regeneration in planarians |
| Q38652947 | The abrogation of condensin function provides independent evidence for defining the self-renewing population of pluripotent stem cells. |
| Q50488662 | The ancestral gene repertoire of animal stem cells |
| Q26314691 | The ancestral gene repertoire of animal stem cells |
| Q38116923 | The history and enduring contributions of planarians to the study of animal regeneration. |
| Q35044492 | The planarian regeneration transcriptome reveals a shared but temporally shifted regulatory program between opposing head and tail scenarios. |
| Q33587409 | The unique stem cell system of the immortal larva of the human parasite Echinococcus multilocularis |
| Q37520810 | Transcriptional signatures of somatic neoblasts and germline cells in Macrostomum lignano |
| Q36236909 | Types or States? Cellular Dynamics and Regenerative Potential |
| Q107750894 | Ultrastructure of Neoblasts in Turbellarian Geocentrophora wagini Timoshkin, 1984 (Lecithoepitheliata: Plathelminthes) |
| Q41047992 | Yorkie is required to restrict the injury responses in planarians |
| Q35679725 | iTRAQ-Based Quantitative Proteomic Analysis of the Initiation of Head Regeneration in Planarians |
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