| scholarly article | Q13442814 |
| P6179 | Dimensions Publication ID | 1044505489 |
| P356 | DOI | 10.1186/1759-8753-4-3 |
| P932 | PMC publication ID | 3600994 |
| P698 | PubMed publication ID | 23286374 |
| P5875 | ResearchGate publication ID | 234049294 |
| P50 | author | Stephane Boissinot | Q30111685 |
| Crystal M. Hepp | Q90065531 | ||
| Akash Sookdeo | Q115787957 | ||
| P2093 | author name string | Marcella A McClure | |
| P2860 | cites work | Initial sequencing and analysis of the human genome | Q21045365 |
| Genome sequence of the Brown Norway rat yields insights into mammalian evolution | Q22122498 | ||
| Initial sequencing and comparative analysis of the mouse genome | Q22122521 | ||
| Non-LTR retrotransposons encode noncanonical RRM domains in their first open reading frame | Q24316232 | ||
| The neighbor-joining method: a new method for reconstructing phylogenetic trees | Q25939010 | ||
| Identification and solution structure of a highly conserved C-terminal domain within ORF1p required for retrotransposition of long interspersed nuclear element-1 | Q27645863 | ||
| MEGA5: Molecular Evolutionary Genetics Analysis Using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods | Q27860929 | ||
| Predicting coiled coils from protein sequences | Q27861097 | ||
| Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition | Q28114795 | ||
| Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: A mechanism for non-LTR retrotransposition | Q28297748 | ||
| Not so different after all: a comparison of methods for detecting amino acid sites under selection | Q28306719 | ||
| Molecular evolution of two lineages of L1 (LINE-1) retrotransposons in the california mouse, Peromyscus californicus | Q28767988 | ||
| Recombination creates novel L1 (LINE-1) elements in Rattus norvegicus | Q28769427 | ||
| Positive Darwinian evolution in human influenza A viruses | Q28775815 | ||
| A novel active L1 retrotransposon subfamily in the mouse | Q28776432 | ||
| HyPhy: hypothesis testing using phylogenies | Q29013475 | ||
| Analyzing the mosaic structure of genes | Q29616749 | ||
| Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology | Q29617583 | ||
| Reverse Transcriptase Encoded by a Human Transposable Element | Q29618213 | ||
| High frequency retrotransposition in cultured mammalian cells | Q29618259 | ||
| Ecological and immunological determinants of influenza evolution. | Q30332657 | ||
| LINE-1 (L1) lineages in the mouse | Q30588607 | ||
| Discovering the phylodynamics of RNA viruses | Q33512517 | ||
| Trimeric structure for an essential protein in L1 retrotransposition | Q33713168 | ||
| The biological properties and evolutionary dynamics of mammalian LINE-1 retrotransposons | Q33851829 | ||
| Sequence-specific single-strand RNA binding protein encoded by the human LINE-1 retrotransposon | Q33887614 | ||
| Evaluation of methods for detecting recombination from DNA sequences: computer simulations | Q33950030 | ||
| Shared sequence variants of Mus spretus LINE-1 elements tracing dispersal to within the last 1 million years | Q33963066 | ||
| Mus spretus LINE-1 sequences detected in the Mus musculus inbred strain C57BL/6J using LINE-1 DNA probes. | Q33964580 | ||
| Rapid amplification of a retrotransposon subfamily is evolving the mouse genome | Q48009768 | ||
| The ability to form intrastrand tetraplexes is an evolutionarily conserved feature of the 3' end of L1 retrotransposons | Q48054629 | ||
| The structures of mouse and human L1 elements reflect their insertion mechanism. | Q48125977 | ||
| An analysis of replacement and synonymous changes in the rodent L1 repeat family. | Q54147671 | ||
| A Modified Bootscan Algorithm for Automated Identification of Recombinant Sequences and Recombination Breakpoints | Q56878359 | ||
| A detailed model of reverse transcription and tests of crucial aspects | Q66971643 | ||
| Dispersal process associated with the L1 family of interspersed repetitive DNA sequences | Q70652228 | ||
| The dynamics of murine LINE-1 subfamily amplification | Q72138075 | ||
| Rodent L1 evolution has been driven by a single dominant lineage that has repeatedly acquired new transcriptional regulatory sequences | Q72825669 | ||
| L1 (LINE-1) retrotransposon evolution and amplification in recent human history | Q73837883 | ||
| Selection against deleterious LINE-1-containing loci in the human lineage | Q73923911 | ||
| Human l1 retrotransposition is associated with genetic instability in vivo | Q74604697 | ||
| Selection against LINE-1 retrotransposons results principally from their ability to mediate ectopic recombination | Q79393368 | ||
| Phylogenomic analysis of the L1 retrotransposons in Deuterostomia | Q79899865 | ||
| Human L1 element target-primed reverse transcription in vitro | Q34207225 | ||
| LINE-1 retrotransposons: modulators of quantity and quality of mammalian gene expression? | Q34433794 | ||
| Unequal homologous recombination between LINE-1 elements as a mutational mechanism in human genetic disease | Q34463149 | ||
| Haemophilia A resulting from de novo insertion of L1 sequences represents a novel mechanism for mutation in man. | Q34553577 | ||
| Identification, characterization, and cell specificity of a human LINE-1 promoter | Q34570051 | ||
| Fitness cost of LINE-1 (L1) activity in humans | Q34687090 | ||
| The relationships between the 5' end repeats and the largest members of the L1 interspersed repeated family in the mouse genome | Q34708303 | ||
| Polymerization and nucleic acid-binding properties of human L1 ORF1 protein | Q35672208 | ||
| Retrotransposons influence the mouse transcriptome: implication for the divergence of genetic traits | Q35846353 | ||
| A systematic analysis of LINE-1 endonuclease-dependent retrotranspositional events causing human genetic disease | Q36177163 | ||
| RNA template requirements for target DNA-primed reverse transcription by the R2 retrotransposable element | Q36552964 | ||
| In vitro properties of the first ORF protein from mouse LINE-1 support its role in ribonucleoprotein particle formation during retrotransposition | Q36583469 | ||
| Extensive variation between inbred mouse strains due to endogenous L1 retrotransposition | Q36700166 | ||
| Ribonucleoprotein particles with LINE-1 RNA in mouse embryonal carcinoma cells | Q36733242 | ||
| L1 A-monomer tandem arrays have expanded during the course of mouse L1 evolution | Q36765534 | ||
| The evolution of long interspersed repeated DNA (L1, LINE 1) as revealed by the analysis of an ancient rodent L1 DNA family | Q36776768 | ||
| Nucleic acid chaperone properties of ORF1p from the non-LTR retrotransposon, LINE-1 | Q37806525 | ||
| Structure, Replication, and Recombination of Retrovirus Genomes: Some Unifying Hypotheses | Q37875366 | ||
| High-affinity, non-sequence-specific RNA binding by the open reading frame 1 (ORF1) protein from long interspersed nuclear element 1 (LINE-1). | Q38359167 | ||
| Automated characterization of potentially active retroid agents in the human genome | Q38488910 | ||
| Rapid evolution of a young L1 (LINE-1) clade in recently speciated Rattus taxa | Q38555934 | ||
| Nucleic acid chaperone activity of the ORF1 protein from the mouse LINE-1 retrotransposon | Q39457323 | ||
| Unrelated sequences at the 5' end of mouse LINE-1 repeated elements define two distinct subfamilies | Q40391265 | ||
| Twin priming: a proposed mechanism for the creation of inversions in L1 retrotransposition | Q40415833 | ||
| Identification of an internal cis-element essential for the human Li transcription and a nuclear factor(s) binding to the element | Q40422731 | ||
| Nucleotide sequence of a mouse full-length F-type L1 element | Q40510259 | ||
| The F-type 5' motif of mouse L1 elements: a major class of L1 termini similar to the A-type in organization but unrelated in sequence | Q40536784 | ||
| Transcriptional disruption by the L1 retrotransposon and implications for mammalian transcriptomes | Q40554054 | ||
| The ORF1 protein encoded by LINE-1: structure and function during L1 retrotransposition | Q42373463 | ||
| Robust inference of positive selection from recombining coding sequences | Q42594804 | ||
| Strand-specific LINE-1 transcription in mouse F9 cells originates from the youngest phylogenetic subgroup of LINE-1 elements | Q42599080 | ||
| Tempo and mode of concerted evolution in the L1 repeat family of mice | Q42662232 | ||
| Adaptive evolution in LINE-1 retrotransposons | Q42664325 | ||
| Molecular evolution and tempo of amplification of human LINE-1 retrotransposons since the origin of primates. | Q43192302 | ||
| A genetic algorithm approach to detecting lineage-specific variation in selection pressure. | Q45995621 | ||
| LINE-1 retrotransposition requires the nucleic acid chaperone activity of the ORF1 protein | Q46434712 | ||
| RDP: detection of recombination amongst aligned sequences | Q46776083 | ||
| Ancestral, mammalian-wide subfamilies of LINE-1 repetitive sequences | Q47207133 | ||
| A new 5' sequence associated with mouse L1 elements is representative of a major class of L1 termini | Q47303017 | ||
| Recombination between subtypes creates a mosaic lineage of LINE-1 that is expressed and actively retrotransposing in the mouse genome | Q47754730 | ||
| The evolution of modern lineages of mouse L1 elements | Q47802852 | ||
| P433 | issue | 1 | |
| P304 | page(s) | 3 | |
| P577 | publication date | 2013-01-03 | |
| P1433 | published in | Mobile DNA | Q15816655 |
| P1476 | title | Revisiting the evolution of mouse LINE-1 in the genomic era | |
| P478 | volume | 4 |
| Q55513776 | 2017 Michael Fry Award Lecture When DNA is Actually Not a Target: Radiation Epigenetics as a Tool to Understand and Control Cellular Response to Ionizing Radiation. |
| Q37701298 | An antisense promoter in mouse L1 retrotransposon open reading frame-1 initiates expression of diverse fusion transcripts and limits retrotransposition |
| Q64965393 | Birth, School, Work, Death, and Resurrection: The Life Stages and Dynamics of Transposable Element Proliferation. |
| Q26772020 | Characteristics of Antisense Transcript Promoters and the Regulation of Their Activity |
| Q28385948 | Chromatin and extracellular vesicle associated sperm RNAs |
| Q38872795 | Combinatorial DNA methylation codes at repetitive elements |
| Q52611666 | Contrasted patterns of evolution of the LINE-1 retrotransposon in perissodactyls: the history of a LINE-1 extinction. |
| Q60143966 | Contribution of Retrotransposable Elements to Aging |
| Q92434468 | Convergence in LINE-1 nucleotide variations can benefit redundantly forming triplexes with lncRNA in mammalian X-chromosome inactivation |
| Q42669968 | DNA methylation and hydroxymethylation analyses of the active LINE-1 subfamilies in mice |
| Q64075888 | DPPA2 and DPPA4 are necessary to establish a 2C-like state in mouse embryonic stem cells |
| Q37698311 | Defending the genome from the enemy within: mechanisms of retrotransposon suppression in the mouse germline |
| Q90326196 | Demethylation and derepression of genomic retroelements in the skeletal muscles of aged mice |
| Q41640839 | Densely ionizing radiation affects DNA methylation of selective LINE-1 elements. |
| Q52567277 | Differential Effect of Selection against LINE Retrotransposons Among Vertebrates Inferred From Whole-Genome Data and Demographic Modeling. |
| Q36106583 | Drawing a fine line on endogenous retroelement activity |
| Q33850543 | Evolutionally dynamic L1 regulation in embryonic stem cells |
| Q96609530 | Genome-wide analysis in the mouse embryo reveals the importance of DNA methylation for transcription integrity |
| Q41199624 | Heritable L1 retrotransposition in the mouse primordial germline and early embryo |
| Q52643023 | Human LINE-1 retrotransposition requires a metastable coiled coil and a positively charged N-terminus in L1ORF1p. |
| Q64068782 | Insertion of a chimeric retrotransposon sequence in mouse locus causes metastable kinky tail phenotype |
| Q38662727 | Inter-Strain Differences in LINE-1 DNA Methylation in the Mouse Hematopoietic System in Response to Exposure to Ionizing Radiation |
| Q55692166 | L1 retrotransposition in the soma: a field jumping ahead. |
| Q52593254 | L1 retrotransposition is a common feature of mammalian hepatocarcinogenesis. |
| Q38605923 | LINE-1 activation after fertilization regulates global chromatin accessibility in the early mouse embryo |
| Q50056354 | LINE-1 in response to exposure to ionizing radiation |
| Q92251310 | LINE1 Derepression in Aged Wild-Type and SIRT6-Deficient Mice Drives Inflammation |
| Q28584519 | LINEs between Species: Evolutionary Dynamics of LINE-1 Retrotransposons across the Eukaryotic Tree of Life |
| Q38480943 | LINEs in mice: features, families, and potential roles in early development |
| Q41199617 | Long terminal repeats power evolution of genes and gene expression programs in mammalian oocytes and zygotes. |
| Q29248115 | Longitudinal Effects of Developmental Bisphenol A and Variable Diet Exposures on Epigenetic Drift in Mice |
| Q28587396 | MORC1 represses transposable elements in the mouse male germline |
| Q38625944 | Mobilization of LINE-1 retrotransposons is restricted by Tex19.1 in mouse embryonic stem cells. |
| Q89231582 | Modulation of dietary methionine intake elicits potent, yet distinct, anticancer effects on primary versus metastatic tumors |
| Q34825937 | Mouse BRWD1 is critical for spermatid postmeiotic transcription and female meiotic chromosome stability |
| Q64117464 | Mouse germ line mutations due to retrotransposon insertions |
| Q52337868 | Protein-nucleic acid interactions of LINE-1 ORF1p. |
| Q35879051 | RNF17 blocks promiscuous activity of PIWI proteins in mouse testes |
| Q36151762 | Repetitive DNA methylome analysis by small-scale and single-cell shotgun bisulfite sequencing |
| Q26741496 | Restricting retrotransposons: a review |
| Q64065726 | Retrotransposons evolution and impact on lncRNA and protein coding genes in pigs |
| Q28657439 | Reviving the dead: history and reactivation of an extinct l1 |
| Q92937255 | SIRT7 mediates L1 elements transcriptional repression and their association with the nuclear lamina |
| Q41594119 | Short-term dietary methionine supplementation affects one-carbon metabolism and DNA methylation in the mouse gut and leads to altered microbiome profiles, barrier function, gene expression and histomorphology |
| Q33929034 | Small RNA profiling and characterization of piRNA clusters in the adult testes of the common marmoset, a model primate. |
| Q47100956 | Striking a balance: regulation of transposable elements by Zfp281 and Mll2 in mouse embryonic stem cells |
| Q64067517 | Subtype classification and functional annotation of L1Md retrotransposon promoters |
| Q37423907 | TET-dependent regulation of retrotransposable elements in mouse embryonic stem cells. |
| Q37738500 | The Evolution of LINE-1 in Vertebrates. |
| Q55204321 | The HUSH complex cooperates with TRIM28 to repress young retrotransposons and new genes. |
| Q26851352 | The Influence of LINE-1 and SINE Retrotransposons on Mammalian Genomes |
| Q92341084 | Tools and best practices for retrotransposon analysis using high-throughput sequencing data |
| Q33677160 | Transcription and chromatin determinants of de novo DNA methylation timing in oocytes |
| Q52721597 | Transient reduction of DNA methylation at the onset of meiosis in male mice. |
| Q37445042 | Transposable elements become active and mobile in the genomes of aging mammalian somatic tissues |
| Q33917425 | Two waves of de novo methylation during mouse germ cell development. |
| Q42361576 | rahu is a mutant allele of Dnmt3c, encoding a DNA methyltransferase homolog required for meiosis and transposon repression in the mouse male germline. |
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