Diverse control of metabolism and other cellular processes in Streptomyces coelicolor by the PhoP transcription factor: genome-wide identification of in vivo targets.

scientific article published on 16 August 2012

Diverse control of metabolism and other cellular processes in Streptomyces coelicolor by the PhoP transcription factor: genome-wide identification of in vivo targets. is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/NAR/GKS766
P932PMC publication ID3479208
P698PubMed publication ID22904076
P5875ResearchGate publication ID230698936

P50authorGiselda BuccaQ56027875
Andrzej M. KierzekQ41117993
P2093author name stringColin P Smith
Emma Laing
Nicholas E E Allenby
P2860cites workPhosphoprotein affinity purification identifies proteins involved in S-adenosyl-L-methionine-induced enhancement of antibiotic production in Streptomyces coelicolor.Q52605791
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Genome-wide transcriptomic and proteomic analysis of the primary response to phosphate limitation inStreptomyces coelicolor M145 and in a ΔphoP mutantQ57041887
Binding of PhoP to promoters of phosphate-regulated genes in Streptomyces coelicolor: identification of PHO boxesQ57041900
Substrate induction and catabolite repression of the Streptomyces coelicolor glycerol operon are mediated through the GylR proteinQ72110553
Strict regulation of morphological differentiation and secondary metabolism by a positive feedback loop between two global regulators AdpA and BldA in Streptomyces griseusQ84869412
Complex transcriptional control of the antibiotic regulator afsS in Streptomyces: PhoP and AfsR are overlapping, competitive activatorsQ42792860
Deletion of a regulatory gene within the cpk gene cluster reveals novel antibacterial activity in Streptomyces coelicolor A3(2).Q43071552
Phosphate control over nitrogen metabolism in Streptomyces coelicolor: direct and indirect negative control of glnR, glnA, glnII and amtB expression by the response regulator PhoP.Q43116988
A complex role for the gamma-butyrolactone SCB1 in regulating antibiotic production in Streptomyces coelicolor A3(2).Q43736205
The polyphosphate kinase plays a negative role in the control of antibiotic production in Streptomyces lividans.Q43944917
Structure, biosynthetic origin, and engineered biosynthesis of calcium-dependent antibiotics from Streptomyces coelicolor.Q44225407
Cross-talk between two global regulators in Streptomyces: PhoP and AfsR interact in the control of afsS, pstS and phoRP transcriptionQ44408672
A cryptic type I polyketide synthase (cpk) gene cluster in Streptomyces coelicolor A3(2).Q45942210
Phosphate and carbon source regulation of two PhoP-dependent glycerophosphodiester phosphodiesterase genes of Streptomyces coelicolorQ46041968
The high-affinity phosphate-binding protein PstS is accumulated under high fructose concentrations and mutation of the corresponding gene affects differentiation in Streptomyces lividansQ46633723
Transcriptional activation of the pathway-specific regulator of the actinorhodin biosynthetic genes in Streptomyces coelicolorQ46704762
The Streptomyces coelicolor GlnR regulon: identification of new GlnR targets and evidence for a central role of GlnR in nitrogen metabolism in actinomycetesQ46819701
Phosphate control of phoA, phoC and phoD gene expression in Streptomyces coelicolor reveals significant differences in binding of PhoP to their promoter regionsQ46974109
The two-component phoR-phoP system of Streptomyces natalensis: Inactivation or deletion of phoP reduces the negative phosphate regulation of pimaricin biosynthesis.Q51098507
Statistical reconstruction of transcription factor activity using Michaelis-Menten kinetics.Q51906419
Bioconductor: open software development for computational biology and bioinformaticsQ21194861
Principles of microbial alchemy: insights from the Streptomyces coelicolor genome sequenceQ24792373
Normalization of cDNA microarray dataQ28181692
Identification and characterization of CdgB, a diguanylate cyclase involved in developmental processes in Streptomyces coelicolorQ28504077
Genes essential for morphological development and antibiotic production in Streptomyces coelicolor are targets of BldD during vegetative growthQ29347208
Rank products: a simple, yet powerful, new method to detect differentially regulated genes in replicated microarray experimentsQ29616371
The dynamic architecture of the metabolic switch in Streptomyces coelicolor.Q33522311
Forty years of genetics with Streptomyces: from in vivo through in vitro to in silicoQ33750125
Studies of the distribution of Escherichia coli cAMP-receptor protein and RNA polymerase along the E. coli chromosome.Q34201883
Production of actinorhodin-related "blue pigments" by Streptomyces coelicolor A3(2).Q34380430
The two-component PhoR-PhoP system controls both primary metabolism and secondary metabolite biosynthesis in Streptomyces lividansQ35022979
Regulation of ppk expression and in vivo function of Ppk in Streptomyces lividans TK24Q35075249
Streptomyces genes: from Waksman to SangerQ35104058
Transcriptional regulation of central carbon and energy metabolism in bacteria by redox-responsive repressor RexQ35805842
Phosphate control of the biosynthesis of antibiotics and other secondary metabolites is mediated by the PhoR-PhoP system: an unfinished storyQ35855083
Secreted-protein response to sigmaU activity in Streptomyces coelicolorQ36421850
Genomic analysis of protein-DNA interactions in bacteria: insights into transcription and chromosome organizationQ36854094
Streptomyces morphogenetics: dissecting differentiation in a filamentous bacterium.Q37349848
Adapting the machine: adaptor proteins for Hsp100/Clp and AAA+ proteasesQ37553901
The regulation of the secondary metabolism of Streptomyces: new links and experimental advancesQ37879562
Bacterial transcriptomics: what is beyond the RNA horiz-ome?Q37916225
Post-transcriptional regulation of the Bacillus subtilis pst operon encoding a phosphate-specific ABC transporterQ38338231
Development and application of versatile high density microarrays for genome-wide analysis of Streptomyces coelicolor: characterization of the HspR regulonQ38357406
Using RSAT to scan genome sequences for transcription factor binding sites and cis-regulatory modulesQ38360732
The RNA polymerase omega factor RpoZ is regulated by PhoP and has an important role in antibiotic biosynthesis and morphological differentiation in Streptomyces coelicolor.Q38957524
Accumulation of S-adenosyl-L-methionine enhances production of actinorhodin but inhibits sporulation in Streptomyces lividans TK23.Q39714156
Feast or famine: the global regulator DasR links nutrient stress to antibiotic production by StreptomycesQ40633871
Deletion of the signalling molecule synthase ScbA has pleiotropic effects on secondary metabolite biosynthesis, morphological differentiation and primary metabolism in Streptomyces coelicolor A3(2)Q42029066
Target genes and structure of the direct repeats in the DNA-binding sequences of the response regulator PhoP in Streptomyces coelicolorQ42095401
P275copyright licenseCreative Commons Attribution-NonCommercial 3.0 UnportedQ18810331
P6216copyright statuscopyrightedQ50423863
P4510describes a project that useslimmaQ112236343
P433issue19
P407language of work or nameEnglishQ1860
P921main subjectStreptomyces coelicolorQ2355919
P304page(s)9543-9556
P577publication date2012-08-16
P1433published inNucleic Acids ResearchQ135122
P1476titleDiverse control of metabolism and other cellular processes in Streptomyces coelicolor by the PhoP transcription factor: genome-wide identification of in vivo targets
P478volume40

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cites work (P2860)
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