The identification of novel cyclic AMP-dependent protein kinase anchoring proteins using bioinformatic filters and peptide arrays

scientific article published on 29 November 2010

The identification of novel cyclic AMP-dependent protein kinase anchoring proteins using bioinformatic filters and peptide arrays is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1093/PROTEIN/GZQ106
P932PMC publication ID3038459
P698PubMed publication ID21115539
P5875ResearchGate publication ID49643267

P50authorTingjun HouQ51200321
Wei WangQ78702853
P2093author name stringSusan S Taylor
William A McLaughlin
P2860cites workIsolation and molecular characterization of AKAP110, a novel, sperm-specific protein kinase A-anchoring proteinQ22009556
mAKAP: an A-kinase anchoring protein targeted to the nuclear membrane of differentiated myocytesQ22010409
MyRIP anchors protein kinase A to the exocyst complexQ24293041
Cloning and characterization of a protein kinase A anchoring protein (AKAP)-related protein that interacts with and regulates sphingosine kinase 1 activityQ24300119
Sphingosine kinase interacting protein is an A-kinase anchoring protein specific for type I cAMP-dependent protein kinaseQ24306725
Molecular cloning, chromosomal localization, and cell cycle-dependent subcellular distribution of the A-kinase anchoring protein, AKAP95Q24311604
A novel lipid-anchored A-kinase Anchoring Protein facilitates cAMP-responsive membrane eventsQ24324609
Localization of the cAMP-dependent protein kinase to the postsynaptic densities by A-kinase anchoring proteins. Characterization of AKAP 79Q24338492
Ezrin is a cyclic AMP-dependent protein kinase anchoring proteinQ24532065
Cloning and characterization of a cDNA encoding an A-kinase anchoring protein located in the centrosome, AKAP450Q24534039
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Cloning and mitochondrial localization of full-length D-AKAP2, a protein kinase A anchoring proteinQ24632727
An evolutionary method for learning HMM structure: prediction of protein secondary structureQ24680309
Bioinformatic design of A-kinase anchoring protein-in silico: a potent and selective peptide antagonist of type II protein kinase A anchoringQ24681565
Related protein-protein interaction modules present drastically different surface topographies despite a conserved helical platformQ27641683
Localization of a novel human A-kinase-anchoring protein, hAKAP220, during spermatogenesisQ28139017
MTG8 proto-oncoprotein interacts with the regulatory subunit of type II cyclic AMP-dependent protein kinase in lymphocytesQ28191156
Ht31: the first protein kinase A anchoring protein to integrate protein kinase A and Rho signalingQ28204010
Compartmentation of cyclic nucleotide signaling in the heart: the role of A-kinase anchoring proteinsQ28237045
Characterization of S-AKAP84, a novel developmentally regulated A kinase anchor protein of male germ cellsQ28285035
Interaction of the regulatory subunit (RII) of cAMP-dependent protein kinase with RII-anchoring proteins occurs through an amphipathic helix binding motifQ28286420
Gravin, an autoantigen recognized by serum from myasthenia gravis patients, is a kinase scaffold proteinQ28301562
The major fibrous sheath polypeptide of mouse sperm: structural and functional similarities to the A-kinase anchoring proteinsQ28504495
A dynamic mechanism for AKAP binding to RII isoforms of cAMP-dependent protein kinaseQ28574420
Molecular characterization of a cDNA that encodes six isoforms of a novel murine A kinase anchor proteinQ28587268
Neurobeachin: A protein kinase A-anchoring, beige/Chediak-higashi protein homolog implicated in neuronal membrane trafficQ28588274
Crystal structure of a complex between the catalytic and regulatory (RIalpha) subunits of PKAQ28910196
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Characterization of domain-peptide interaction interface: a generic structure-based model to decipher the binding specificity of SH3 domainsQ30157459
Evolutionary predictions of binding surfaces and interactions.Q30329608
Identification and characterization of myeloid translocation gene 16b as a novel a kinase anchoring protein in T lymphocytesQ30805035
Characterization of an A-kinase anchoring protein in human ciliary axonemesQ30873792
Functions of a new family of sphingosine-1-phosphate receptorsQ31640177
The intermediate filament protein, synemin, is an AKAP in the heartQ33255397
AKAPs: from structure to functionQ33650483
Specificity in the cAMP/PKA signaling pathway. Differential expression,regulation, and subcellular localization of subunits of PKA.Q33988753
Localization and characterization of the binding site for the regulatory subunit of type II cAMP-dependent protein kinase on MAP2.Q34519992
Designing isoform-specific peptide disruptors of protein kinase A localizationQ34921315
A-kinase anchoring proteins and neuronal signaling mechanismsQ35169828
Localized effects of cAMP mediated by distinct routes of protein kinase A.Q35625604
Activation of sphingosine kinase 1 by ERK1/2-mediated phosphorylationQ36267274
Sphingosine kinase expression increases intracellular sphingosine-1-phosphate and promotes cell growth and survival.Q36294755
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cAMP signal transduction in the heart: understanding spatial control for the development of novel therapeutic strategiesQ37445957
Underpinning compartmentalised cAMP signalling through targeted cAMP breakdownQ37623201
Analysis of the cGMP/cAMP interactome using a chemical proteomics approach in mammalian heart tissue validates sphingosine kinase type 1-interacting protein as a genuine and highly abundant AKAP.Q40273003
Induction of Cbeta splice variants and formation of novel forms of protein kinase A type II holoenzymes during retinoic acid-induced differentiation of human NT2 cellsQ40594164
Rab32 is an A-kinase anchoring protein and participates in mitochondrial dynamicsQ40709834
Sphingosine kinase mediates cyclic AMP suppression of apoptosis in rat periosteal cellsQ41026756
Protein kinase A anchoringQ41505004
High-affinity AKAP7delta-protein kinase A interaction yields novel protein kinase A-anchoring disruptor peptidesQ41833243
WAVE1 intranuclear trafficking is essential for genomic and cytoskeletal dynamics during fertilization: cell-cycle-dependent shuttling between M-phase and interphase nucleiQ45175376
Prediction of binding sites of peptide recognition domains: an application on Grb2 and SAP SH2 domainsQ46193194
Peptides for disruption of PKA anchoring.Q52572282
Induction of apoptosis by all-trans-retinoic acid and C2-ceramide treatment in rat stromal-vascular culturesQ73585858
Ambient temperature regulation of apoptosis in brown adipose tissue. Erk1/2 promotes norepinephrine-dependent cell survivalQ77520840
Molecular basis of AKAP specificity for PKA regulatory subunitsQ79326012
P433issue3
P407language of work or nameEnglishQ1860
P921main subjectbioinformaticsQ128570
P304page(s)333-339
P577publication date2010-11-29
P1433published inProtein Engineering Design and SelectionQ15762396
P1476titleThe identification of novel cyclic AMP-dependent protein kinase anchoring proteins using bioinformatic filters and peptide arrays
P478volume24

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cites work (P2860)
Q28509852An entirely specific type I A-kinase anchoring protein that can sequester two molecules of protein kinase A at mitochondria
Q27973894Characterization of an A-kinase anchoring protein-like suggests an alternative way of PKA anchoring in Plasmodium falciparum
Q34447042Chromodomain helicase binding protein 8 (Chd8) is a novel A-kinase anchoring protein expressed during rat cardiac development

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