Practical lessons from theoretical models about the somitogenesis

scientific article published on 28 May 2007

Practical lessons from theoretical models about the somitogenesis is …
instance of (P31):
review articleQ7318358
scholarly articleQ13442814

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P932PMC publication ID2759138
P698PubMed publication ID19936076

P2093author name stringRyoichiro Kageyama
Aitor González
P2860cites workOscillatory regulation of Hes1: Discrete stochastic delay modelling and simulationQ21145678
Hes7: a bHLH-type repressor gene regulated by Notch and expressed in the presomitic mesodermQ24290956
Number of active transcription factor binding sites is essential for the Hes7 oscillatorQ25255507
Repressor dimerization in the zebrafish somitogenesis clockQ27339483
Oscillatory expression of the bHLH factor Hes1 regulated by a negative feedback loopQ28210742
Instability of Hes7 protein is crucial for the somite segmentation clockQ28505422
The Mesp2 transcription factor establishes segmental borders by suppressing Notch activityQ28505901
LEF1-mediated regulation of Delta-like1 links Wnt and Notch signaling in somitogenesisQ28506650
Periodic repression by the bHLH factor Hes7 is an essential mechanism for the somite segmentation clockQ28585491
Wnt3a plays a major role in the segmentation clock controlling somitogenesisQ28587356
Dynamic expression and essential functions of Hes7 in somite segmentationQ28593057
Notch signalling is required for cyclic expression of the hairy-like gene HES1 in the presomitic mesodermQ28594325
Control of the segmentation process by graded MAPK/ERK activation in the chick embryoQ30476074
Real-time imaging of the somite segmentation clock: revelation of unstable oscillators in the individual presomitic mesoderm cellsQ30476642
Negative feedback loop formed by Lunatic fringe and Hes7 controls their oscillatory expression during somitogenesisQ32874834
Notch signalling and the synchronization of the somite segmentation clockQ33926876
A targeted mutation of Nkd1 impairs mouse spermatogenesis.Q34368337
A clock and wavefront mechanism for somite formation.Q34503219
Noise-resistant and synchronized oscillation of the segmentation clock.Q34535986
Models for pattern formation in somitogenesis: a marriage of cellular and molecular biologyQ34644122
The promise and perils of Wnt signaling through beta-catenin.Q34647705
Segmentation and zooid formation in animals with a posterior growing region: the case for metabolic gradients and Turing wavesQ35595161
A Notch feeling of somite segmentation and beyondQ35617198
Segmentation in vertebrates: clock and gradient finally joinedQ35876942
Periodic pattern formation in reaction-diffusion systems: an introduction for numerical simulationQ35903963
Running after the clock.Q36133419
Sprouty proteins: multifaceted negative-feedback regulators of receptor tyrosine kinase signaling.Q36336041
The long and short of it: somite formation in miceQ36488814
On periodicity and directionality of somitogenesisQ36615955
Dusp6 (Mkp3) is a negative feedback regulator of FGF-stimulated ERK signaling during mouse developmentQ36713660
Segmental border is defined by the key transcription factor Mesp2, by means of the suppression of Notch activityQ36774083
Rapid, Wnt-induced changes in GSK3beta associations that regulate beta-catenin stabilization are mediated by Galpha proteinsQ40348493
WNT signaling, in synergy with T/TBX6, controls Notch signaling by regulating Dll1 expression in the presomitic mesoderm of mouse embryosQ40408286
A gene that resuscitates a theory--somitogenesis and a molecular oscillatorQ41737710
A mathematical model of the mechanism of vertebrate somitic segmentation.Q44571027
Opposing FGF and retinoid pathways control ventral neural pattern, neuronal differentiation, and segmentation during body axis extensionQ44607276
Periodic segmental anomalies induced by heat shock in the chick embryo are associated with the cell cycle.Q45103852
Is the somitogenesis clock really cell-autonomous? A coupled-oscillator model of segmentationQ47645021
Oscillatory expression of Hes1, p53, and NF-kappaB driven by transcriptional time delaysQ47672822
Avian hairy gene expression identifies a molecular clock linked to vertebrate segmentation and somitogenesisQ48041941
Periodic Lunatic fringe expression is controlled during segmentation by a cyclic transcriptional enhancer responsive to notch signaling.Q48294316
Control of chemical pattern formation by a clock-and-wavefront type mechanism.Q51653569
A complex oscillating network of signaling genes underlies the mouse segmentation clock.Q51929054
WNT and DKK determine hair follicle spacing through a reaction-diffusion mechanism.Q51929587
Modelling transcriptional feedback loops: the role of Gro/TLE1 in Hes1 oscillations.Q51943922
A mathematical formulation for the cell-cycle model in somitogenesis: analysis, parameter constraints and numerical solutions.Q51995243
Autoinhibition with transcriptional delay: a simple mechanism for the zebrafish somitogenesis oscillator.Q52010517
Oscillations of the snail genes in the presomitic mesoderm coordinate segmental patterning and morphogenesis in vertebrate somitogenesis.Q52024277
Cellular oscillators in animal segmentation.Q52038557
A cell cycle model for somitogenesis: mathematical formulation and numerical simulation.Q52071511
Mouse Nkd1, a Wnt antagonist, exhibits oscillatory gene expression in the PSM under the control of Notch signaling.Q52086163
Periodic notch inhibition by lunatic fringe underlies the chick segmentation clock.Q52110194
A cellular oscillator model for periodic pattern formation.Q52122663
FGF signaling controls somite boundary position and regulates segmentation clock control of spatiotemporal Hox gene activation.Q52130820
Segmentation and somitogenesis derived from phase dynamics in growing oscillatory media.Q52144341
A cell lineage analysis of segmentation in the chick embryo.Q52452578
fgf8 mRNA decay establishes a gradient that couples axial elongation to patterning in the vertebrate embryo.Q54731950
Sustained oscillations and time delays in gene expression of protein Hes1Q58882338
A clock and wavefront model for control of the number of repeated structures during animal morphogenesisQ60698414
Heat shock causes repeated segmental anomalies in the chick embryoQ68085076
The problem of periodic patterns in embryosQ72506722
A clock and trail model for somite formation, specialization and polarizationQ73959603
Theoretical embryology: a route to extinction?Q75230121
P407language of work or nameEnglishQ1860
P921main subjectsomitogenesisQ3489847
P304page(s)35-42
P577publication date2007-05-28
P1433published inGene Regulation and Systems BiologyQ15753741
P1476titlePractical lessons from theoretical models about the somitogenesis
P478volume1

Reverse relations

Q27321015Fast synchronization of ultradian oscillators controlled by delta-notch signaling with cis-inhibitioncites workP2860

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