Development of a novel CASA system based on open source software for characterization of zebrafish sperm motility parameters

scientific article published on 29 November 2006

Development of a novel CASA system based on open source software for characterization of zebrafish sperm motility parameters is …
instance of (P31):
scholarly articleQ13442814

External links are
P356DOI10.1016/J.THERIOGENOLOGY.2006.10.003
P698PubMed publication ID17137620

P2093author name stringJonas G Wilson-Leedy
Rolf L Ingermann
P2860cites workCryopreservation of turbot (Scophthalmus maximus) spermatozoa.Q33244801
Cell_motility: a cross-platform, open source application for the study of cell motion pathsQ33246163
Computer assisted semen analyzers in andrology research and veterinary practiceQ34484110
Membrane hyperpolarization removes inactivation of Ca2+ channels, leading to Ca2+ influx and subsequent initiation of sperm motility in the common carpQ35047521
Quality control of refrigerated and cryopreserved semen using computer-assisted sperm analysis (CASA), viable staining and standardized fertilization in African catfish (Clarias gariepinus).Q43540110
Sperm Quality as Reflected Through Morphology in Salmon Alternative Life Histories1Q43829245
Overview of studies on rat sperm motion analysis using a Hamilton-Thorne Sperm Analyzer--collaborative working studyQ43900497
The effect of 4-nonylphenol on semen quality, viability of gametes, fertilization success, and embryo and larvae survival in rainbow trout (Oncorhynchus mykiss).Q45264693
K+-independent initiation of motility in chum salmon sperm treated with an organic alcohol, glycerolQ46844314
Effect of technical settings on canine semen motility parameters measured by the Hamilton-Thorne analyzerQ49152907
Spermatozoal competition in common carp (Cyprinus carpio): what is the primary determinant of competition success?Q50748804
Quantitative characteristics of Atlantic halibut, Hippoglossus hippoglossus L., semen throughout the reproductive seasonQ51836265
Rapid adjustments of sperm characteristics in relation to social status.Q55407460
Physio-Chemical Characteristics of Seminal Plasma and Development of Media and Methods for the Cryopreservation of European eel SpermQ63467021
Synchronous triggering of trout sperm is followed by an invariable set sequence of movement parameters whatever the incubation mediumQ67790655
Evaluation of the "Hamilton Thorn computer-based automated system" for dog semen analysisQ73602562
Sperm metabolism of the telost fishes Chalcalburnus chalcoides and Oncorhynchus mykiss and its relation to motility and viabilityQ78140434
Seminal plasma proteins prolong the viability of rainbow trout (Oncorynchus mykiss) spermatozoaQ80335708
Computer-aided evaluation of assessment of "grade a" spermatozoa by experienced techniciansQ82262048
P433issue3
P921main subjectDanio rerioQ169444
softwareQ7397
open-source softwareQ1130645
sperm motilityQ27116486
P304page(s)661-672
P577publication date2006-11-29
P1433published inTheriogenologyQ15761715
P1476titleDevelopment of a novel CASA system based on open source software for characterization of zebrafish sperm motility parameters
P478volume67

Reverse relations

cites work (P2860)
Q50923397A feeding model of oyster larvae (Crassostrea angulata).
Q90847002A microfluidic device for motility and osmolality analysis of zebrafish sperm
Q40677096A new Bayesian network-based approach to the analysis of sperm motility: application in the study of tench (Tinca tinca) semen
Q50275435A novel sperm adaptation to evolutionary constraints on reproduction: Pre-ejaculatory sperm activation in the beach spawning capelin (Osmeridae).
Q92079311A sublethal dose of the neonicotinoid insecticide acetamiprid reduces sperm density in a songbird
Q60297328ATP content and viability of spermatozoa drive variability of fertilization success in the Pacific oyster ( Crassostrea gigas )
Q92376996Acute and sub-acute bisphenol-B exposures adversely affect sperm count and quality in adolescent male mice
Q98511149Adult exposure to acidified seawater influences sperm physiology in Mytilus galloprovincialis: Laboratory and in situ transplant experiments
Q46488887Alkaline phosphatase added to capacitating medium enhances horse sperm-zona pellucida binding.
Q100416627Alternative reproductive tactics are associated with sperm performance in invasive round goby from two different salinity environments
Q60292510Alternative reproductive tactics, sperm mobility and oxidative stress in Carollia perspicillata (Seba’s short-tailed bat)
Q90000143Aluminum, at an environmental concentration, associated with acidic pH and high water temperature, causes impairment of sperm quality in the freshwater teleost Astyanax altiparanae (Teleostei: Characidae)
Q31041107An on-chip pollutant toxicity determination based on marine microalgal swimming inhibition
Q110757750Ancestral Sperm Ecotypes Reveal Multiple Invasions of a Non-Native Fish in Northern Europe
Q29994795Antioxidant allocation modulates sperm quality across changing social environments
Q92150575Assessing the potential for post-ejaculatory female choice in a polyandrous beach-spawning fish
Q43812744Assessment of DNA damage in sperm after repeated non-invasive sampling in zebrafish Danio rerio.
Q60489493Assessment of oocyte and trochophore quality in Pacific oyster, Crassostrea gigas
Q36134716Automated Sperm Head Detection Using Intersecting Cortical Model Optimised by Particle Swarm Optimization
Q91749059Automated semen analysis by SQA Vision® versus the manual approach-A prospective double-blind study
Q85025138Automated sperm head morphology analyzer for open-source software
Q60292529Badge Size Reflects Sperm Oxidative Status within Social Groups in the House Sparrow Passer domesticus
Q90870974Behavior of ACRBP-deficient mouse sperm in the female reproductive tract
Q35546952Behavioral mechanism of human sperm in thermotaxis: a role for hyperactivation.
Q60511084Biological characteristics of sperm in European flat oyster (Ostrea edulis)
Q87993573CASA-Mot in mammals: an update
Q101165932CFAP45 deficiency causes situs abnormalities and asthenospermia by disrupting an axonemal adenine nucleotide homeostasis module
Q56689001Catsper3 and Catsper4 Are Essential for Sperm Hyperactivated Motility and Male Fertility in the Mouse1
Q50066999Changes in external osmolality and ionic composition affect Megaleporinus obtusidens sperm motility.
Q46557446Characterization of rheotaxis of bull sperm using microfluidics
Q51145752Chemically moderated gamete preferences predict offspring fitness in a broadcast spawning invertebrate
Q89044494Chemically-dispersed crude oil and dispersant affects sperm fertilizing ability, but not sperm swimming behaviour in capelin (Mallotus villosus)
Q58776307Comparisons of reproductive function and fatty acid fillet quality between triploid and diploid farm Atlantic salmon (Salmo salar)
Q84627454Complex patterns of multivariate selection on the ejaculate of a broadcast spawning marine invertebrate
Q38165991Computer-assisted sperm analysis (CASA): capabilities and potential developments
Q37058735Condition‐dependent expression of pre‐ and postcopulatory sexual traits in guppies
Q35690219Cryopreservation of lumpfish Cyclopterus lumpus (Linnaeus, 1758) milt
Q88017465Development of an in vitro toxicological test system based on zebrafish (Danio rerio) sperm analysis
Q28365499Development of computer-assisted sperm analysis plugin for analyzing sperm motion in microfluidic environments using Image-J
Q57800747Development of microfluidic dilution network-based system for lab-on-a-chip microalgal bioassays
Q46912245Dietary carotenoids do not improve motility or antioxidant capacity in cichlid fish sperm
Q34914316Different computer-assisted sperm analysis (CASA) systems highly influence sperm motility parameters.
Q34458698Different swimming behaviors of sterlet (Acipenser ruthenus) spermatozoa close to solid and free surfaces
Q92601520Differential investment in pre- and post-mating male sexual traits in response to prolonged exposure to ambient UVB radiation in a fish
Q43757950Effect of aging on male reproduction in zebrafish (Danio rerio)
Q57166133Effect of frame rate capture frequency on sperm kinematic parameters and subpopulation structure definition in boars, analysed with a CASA-Mot system
Q95669989Effects of Salinity and Pesticide on Sperm Activity and Oviposition Site Selection in Green Treefrogs,Hyla cinerea
Q51148872Effects of an early-life paraquat exposure on adult resistance to oxidative stress, plumage colour and sperm performance in a wild bird.
Q91939241Effects of cooling rates on the quality of Prochilodus lineatus (Valenciennes, 1836) sperm
Q90843433Effects of diisononyl phthalate (DiNP) on the endocannabinoid and reproductive systems of male gilthead sea bream (Sparus aurata) during the spawning season
Q52611032Effects of progesterone on sperm motility in fathead minnow (Pimephales promelas).
Q92244976Effects of temperature on sperm motility of burbot Lota lota: spontaneous activation and calcium dependency
Q90948398Effects on fertility of motile sperm to egg ratio with use of cryopreserved Rhamdia quelen semen at different post-activation times
Q97536400Efficiency and cell viability implications using tip type electroporation in zebrafish sperm cells
Q98505112Egg-sperm interaction in sturgeon: role of ovarian fluid
Q39401511Evaluation of methods to determine sperm density for the European eel, Anguilla anguilla.
Q54731322Evaluation of sperm motility with CASA-Mot: which factors may influence our measurements?
Q110527787Evaluation of stallion sperm motility with ImageJ using a cell phone camera and a light microscope
Q95293830Evidence of rapid adaptive trait change to local salinity in the sperm of an invasive fish
Q51156751Evidence that fertility trades off with early offspring fitness as males age.
Q51553358Evolution of sperm quality but not quantity in the internally fertilized fish Xiphophorus nigrensis
Q98237215Expanding the Limits of Computer-Assisted Sperm Analysis through the Development of Open Software
Q92133681Experimental manipulation of reproductive tactics in Seba's short-tailed bats: consequences on sperm quality and oxidative status
Q51369884Exposure to 17α-ethinylestradiol decreases motility and ATP in sperm of male fighting fish Betta splendens
Q41889619Exposure to environmentally relevant concentrations of genistein during activation does not affect sperm motility in the fighting fish Betta splendens
Q57699063Expression of pre- and postcopulatory traits under different dietary conditions in guppies
Q48365195Fibroblast growth factor 2 (FGF2) is present in human spermatozoa and is related with sperm motility. The use of recombinant FGF2 to improve motile sperm recovery
Q51288684Fins improve the swimming performance of fish sperm: a hydrodynamic analysis of the Siberian sturgeon Acipenser baerii
Q52323252Fish sperm motility analysis: the central role of the flagellum.
Q92960384Freezing ovarian fluid does not alter how it affects fish sperm swimming performance: creating a cryptic female choice 'spice rack' for use in split-ejaculate experimentation
Q37782440Frenetic activation of fish spermatozoa flagella entails short-term motility, portending their precocious decadence
Q46752243Genotype-by-environment interactions underlie the expression of pre- and post-copulatory sexually selected traits in guppies
Q37598904Germplasm cryobanking in zebrafish and other aquarium model species.
Q97642556Going beyond conventional parameters to unveil sperm quality in fish: the use of fibre optic technology to assess mitochondrial respiratory performance
Q46315471Gonadorelin increases semen production and does not affect its quality in Leporinus obtusidens
Q46323688Immigrant reproductive dysfunction facilitates ecological speciation
Q33963971Immune activation reduces sperm quality in the great tit.
Q88432675Implementation of novel statistical procedures and other advanced approaches to improve analysis of CASA data
Q30490403Implementing an open-access CASA software for the assessment of stallion sperm motility: Relationship with other sperm quality parameters.
Q46137566Influence of osmolality and ions on the activation and characteristics of zebrafish sperm motility
Q51029631Inter-population ovarian fluid variation differentially modulates sperm motility in Atlantic cod Gadus morhua.
Q60297360Involvement of Mitochondrial Activity and OXPHOS in ATP Synthesis During the Motility Phase of Spermatozoa in the Pacific Oyster, Crassostrea gigas1
Q58719066Is sperm morphology functionally related to sperm swimming ability? A case study in a wild passerine bird with male hierarchies
Q52664063Juvenile exposure to vinclozolin shifts sex ratios and impairs reproductive capacity of zebrafish
Q34403011Linking sperm length and velocity: the importance of intramale variation.
Q87904392Low concentrations of glyphosate-based herbicide cause complete loss of sperm motility of yellowtail tetra fish Astyanax lacustris
Q51514897Marine phytoplankton motility sensor integrated into a microfluidic chip for high-throughput pollutant toxicity assessment
Q67242162Measuring sperm swimming performance in birds: effects of dilution, suspension medium, mechanical agitation, and sperm number
Q100449937Melatonin regulates ATP content and fertilising capacity of Onychostoma macrolepis spermatozoa by inhibiting ROS accumulation during semen storage in vitro
Q51529007Metabolism of motile zebrafish sperm
Q94950043Methodological considerations for examining the relationship between sperm morphology and motility
Q51536856Microalgal motility measurement microfluidic chip for toxicity assessment of heavy metals
Q30452281Microfluidic mixing for sperm activation and motility analysis of pearl Danio zebrafish
Q91353822Microfluidic retention of progressively motile zebrafish sperms
Q41719704Microfluidics and numerical simulation as methods for standardization of zebrafish sperm cell activation
Q48227417Modification of sperm quality after sexual abstinence in Seba's short-tailed bat, Carollia perspicillata
Q110527837Modifications to the imagej computer assisted sperm analysis plugin greatly improve efficiency and fundamentally alter the scope of attainable data
Q43056467Motility and fertility of the subtropical freshwater fish streaked prochilod (Prochilodus lineatus) sperm cryopreserved in powdered coconut water.
Q35582912Motility initiation of sterlet sturgeon (Acipenser ruthenus) spermatozoa: Describing the propagation of the first flagellar waves.
Q98567035Nanopolystyrene beads affect motility and reproductive success of oyster spermatozoa (Crassostrea gigas)
Q47954653Natural and artificial spawning strategies with fresh and cryopreserved semen in Rhamdia quelen: Reproductive parameters and genetic variability of offspring.
Q51648829No evidence for sperm priming responses under varying sperm competition risk or intensity in guppies
Q49430125No evidence of inbreeding depression in sperm performance traits in wild song sparrows.
Q88778198Objective evaluation of ram and buck sperm motility by using a novel sperm tracker software
Q59792129Ocean Acidification Impairs Foraging Behavior by Interfering With Olfactory Neural Signal Transduction in Black Sea Bream,
Q93056898Ocean acidification impact on ascidian Ciona robusta spermatozoa: New evidence for stress resilience
Q61813738OpenCASA: A new open-source and scalable tool for sperm quality analysis
Q110527844Optimization of the Method for Determining the Motility Characteristics of Fish spermatozoa Using ImageJ Software and Excel Macros
Q48569668Optimization of the sperm:oocyte ratio and sperm economy in the artificial reproduction of Rhamdia quelen using fructose as a sperm motility modulator.
Q33493255Out-of-season sperm cryopreserved in different media of the Amazonian freshwater fish pirapitinga (Piaractus brachypomus).
Q46365406Oxidative stress affects sperm performance and ejaculate redox status in subordinate house sparrows.
Q92646392Parental stressor exposure simultaneously conveys both adaptive and maladaptive larval phenotypes through epigenetic inheritance in the zebrafish (Danio rerio)
Q91253351Patagonian blenny (Eleginops maclovinus) spermatozoa quality after storage at 4 ºC in Cortland medium
Q35265073Patterns of genetic variation and covariation in ejaculate traits reveal potential evolutionary constraints in guppies
Q34447402Postcopulatory inbreeding avoidance in guppies.
Q96645645Postglacial establishment of locally adapted fish populations over a steep salinity gradient
Q59232833Preliminary results on sperm motility and testicular histology of two feral fish species,Oreochromis mossambicusandClarias gariepinus, from a currently DDT-sprayed area, South Africa
Q90077440Production of live young with cryopreserved sperm from the endangered livebearing fish Redtail Splitfin (Xenotoca eiseni, Rutter, 1896)
Q85102198Production of nitric oxide by sperm of the steelhead (Oncorhynchus mykiss) and its actions on motility and respiration
Q50282424Quantitative analysis of sperm plane circular movement in the blue mussels Mytilus edulis, M. trossulus and their hybrids.
Q55498819Quantitative genetic evidence that males trade attractiveness for ejaculate quality in guppies.
Q37466090Queen reproductive tract secretions enhance sperm motility in ants
Q37408427Re-visiting the Protamine-2 locus: deletion, but not haploinsufficiency, renders male mice infertile.
Q49386115Rearing in captivity affects spermatogenesis and sperm quality in greater amberjack, Seriola dumerili (Risso, 1810).
Q46972078Relationships between sperm length and speed differ among three internally and three externally fertilizing species
Q89933179Repeated immune challenges affect testosterone but not sperm quality
Q52601733Reproductive consequences of exposure to waterborne phytoestrogens in male fighting fish Betta splendens.
Q52879819Rival seminal fluid induces enhanced sperm motility in a polyandrous ant.
Q92131355Sea urchin reproductive performance in a changing ocean: poor males improve while good males worsen in response to ocean acidification
Q30401681Selection of functional human sperm with higher DNA integrity and fewer reactive oxygen species
Q88909959Seminal fluid enhances competitiveness of territorial males' sperm in a fish with alternative male reproductive tactics
Q84004483Setting tools for the early assessment of the quality of thawed Pacific oyster (Crassostrea gigas) D-larvae
Q91615725Small RNAs in Rat Sperm Are a Predictive and Sensitive Biomarker of Exposure to the Testicular Toxicant Ethylene Glycol Monomethyl Ether
Q51898910Social cues of sperm competition influence accessory reproductive gland size in a promiscuous mammal
Q30840615Social dominance explains within-ejaculate variation in sperm design in a passerine bird
Q92795044Social dominance, but not parasite load, affects sperm quality and sperm redox status in house sparrows
Q30670905Sperm competition risk drives plasticity in seminal fluid composition
Q83930566Sperm competition roles and ejaculate investment in a promiscuous mammal
Q44406758Sperm cryopreservation affects postthaw motility, but not embryogenesis or larval growth in the Brazilian fish Brycon insignis (Characiformes).
Q36358725Sperm in hot water: direct and indirect thermal challenges interact to impact on brown trout sperm quality
Q51731987Sperm kinematics and subpopulational responses during the cryopreservation process in caprine ejaculates
Q59232801Sperm motility and testicular histology as reproductive indicators inClarias gariepinusfrom an eutrophic impoundment, South Africa
Q59232817Sperm motility and testicular histology as reproductive indicators of fish health of two feral fish species from a currently DDT sprayed area, South Africa
Q34450502Sperm motility of externally fertilizing fish and amphibians
Q51640579Sperm of colourful males are better protected against oxidative stress.
Q110758371Sperm performance limits the reproduction of an invasive fish in novel salinities
Q60426839Sperm performance under hypoxic conditions in the intertidal fish Porichthys notatus
Q57299694Sperm quality in wild-caught and farmed males of the European eel (Anguilla anguilla)
Q93046468Sperm swimming behaviors are correlated with sperm haploid genetic variability in the Mexican tetra, Astyanax mexicanus
Q33668734Sperm swimming velocity predicts competitive fertilization success in the green swordtail Xiphophorus helleri
Q57269567Sperm traits of masculinized fish relative to wild-type males: a systematic review and meta-analyses
Q95283166Sperm-Driven Micromotors Moving in Oviduct Fluid and Viscoelastic Media
Q64060666Sperm-duct gland content increases sperm velocity in the sand goby
Q92987698Spermatozoa motility in bivalves: Signaling, flagellar beating behavior, and energetics
Q61465056Spermatozoa quality and sperm lipid composition in intensively cultured and wild burbot (Lota lota)
Q63466909Standardization of European eel (Anguilla anguilla) sperm motility evaluation by CASA software
Q37827236Statistical Series: Opportunities and challenges of sperm motility subpopulation analysis.
Q48589957Storage of Steindachneridion parahybae oocytes at different temperatures
Q41358745Stressful environments induce novel phenotypic variation: hierarchical reaction norms for sperm performance of a pervasive invader
Q55037926Subordinate male cichlids retain reproductive competence during social suppression.
Q83190896Subpopulation distribution of motile sperm relative to activation medium in steelhead (Oncorhynchus mykiss)
Q35138598Survival, growth and reproduction of cryopreserved larvae from a marine invertebrate, the Pacific oyster (Crassostrea gigas).
Q55323787Systematic studies of all PIH proteins in zebrafish reveal their distinct roles in axonemal dynein assembly.
Q54957098Tactic-specific differences in seminal fluid influence sperm performance
Q54592355Testing the interactive effects of carotenoids and polyunsaturated fatty acids on ejaculate traits in the guppy Poecilia reticulata (Pisces: Poeciliidae)
Q51736409The antidepressant fluoxetine alters mechanisms of pre- and post-copulatory sexual selection in the eastern mosquitofish (Gambusia holbrooki).
Q51064821The dynamics of sperm cooperation in a competitive environment
Q34110256The expression of pre- and postcopulatory sexually selected traits reflects levels of dietary stress in guppies
Q36211578The genetic basis and fitness consequences of sperm midpiece size in deer mice
Q89138517The in vitro toxicity analysis of titanium dioxide (TiO2) nanoparticles on kinematics and biochemical quality of rainbow trout sperm cells
Q46584911The quality of great scallop (Pecten maximus) sperm after thawing
Q100724458Three decades of sperm competition in birds
Q92241843Toxicity of BDE-47, BDE-99 and BDE-153 on swimming behavior of the unicellular marine microalgae Platymonas subcordiformis and implications for seawater quality assessment
Q44062754Toxicity of copper, lead, and cadmium on the motility of two marine microalgae Isochrysis galbana and Tetraselmis chui.
Q34781428Toxicity of environmental contaminants to fish spermatozoa function in vitro—A review
Q46801924Use of diatom motility features as endpoints of metolachlor toxicity.
Q84490823What is the best frame rate for evaluation of sperm motility in different species by computer-assisted sperm analysis?
Q53841131pH controls spermatozoa motility in the Pacific oyster (Crassostrea gigas).
Q28511187αTAT1 is the major α-tubulin acetyltransferase in mice

Search more.