Homology modelling of the GABA transporter and analysis of tiagabine binding

scientific article published on July 2010

Homology modelling of the GABA transporter and analysis of tiagabine binding is …
instance of (P31):
scholarly articleQ13442814

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P356DOI10.1002/CMDC.201000100
P8608Fatcat IDrelease_jou5cfg4kzabtkm36vglmbmx2y
P698PubMed publication ID20491137

P50authorHans Bräuner-OsborneQ37831020
P2093author name stringOlivier Taboureau
Flemming Steen Jørgensen
Søren Skovstrup
P2860cites workDriving forces for ligand migration in the leucine transporterQ46323912
Proximity of transmembrane domains 1 and 3 of the gamma-aminobutyric acid transporter GAT-1 inferred from paired cysteine mutagenesisQ46499559
Inhibition of GABA uptake in rat brain slices by nipecotic acid, various isoxazoles and related compoundsQ48427274
Selective amino acid substitutions convert the creatine transporter to a gamma-aminobutyric acid transporter.Q51990209
Structure-based rationalization of antitumor drugs mechanism of action by a MIF approachQ58137126
A comprehensive structure-based alignment of prokaryotic and eukaryotic neurotransmitter/Na+ symporters (NSS) aids in the use of the LeuT structure to probe NSS structure and functionQ80035224
Identification of a lithium interaction site in the gamma-aminobutyric acid (GABA) transporter GAT-1Q83938300
LeuT-desipramine structure reveals how antidepressants block neurotransmitter reuptakeQ24598921
Antidepressant specificity of serotonin transporter suggested by three LeuT-SSRI structuresQ24655640
Antidepressant binding site in a bacterial homologue of neurotransmitter transportersQ27647095
A competitive inhibitor traps LeuT in an open-to-out conformationQ27653127
VMD: visual molecular dynamicsQ27860554
Comparative protein modelling by satisfaction of spatial restraintsQ27860866
Synaptic uptake and beyond: the sodium- and chloride-dependent neurotransmitter transporter family SLC6Q28201669
The interaction of the gamma-aminobutyric acid transporter GAT-1 with the neurotransmitter is selectively impaired by sulfhydryl modification of a conformationally sensitive cysteine residue engineered into extracellular loop IVQ28202347
Transmembrane domain I of the gamma-aminobutyric acid transporter GAT-1 plays a crucial role in the transition between cation leak and transport modesQ28215794
The aqueous accessibility in the external half of transmembrane domain I of the GABA transporter GAT-1 Is modulated by its ligandsQ28240888
Tyrosine 140 of the gamma-aminobutyric acid transporter GAT-1 plays a critical role in neurotransmitter recognitionQ28241690
Role of the conserved glutamine 291 in the rat gamma-aminobutyric acid transporter rGAT-1Q28569505
Crystal structure of a bacterial homologue of Na+/Cl--dependent neurotransmitter transportersQ29616590
Structure-activity relationships of selective GABA uptake inhibitors.Q33999938
The synthesis of novel GABA uptake inhibitors. 1. Elucidation of the structure-activity studies leading to the choice of (R)-1-[4,4-bis(3-methyl-2-thienyl)-3-butenyl]-3-piperidinecarboxylic acid (tiagabine) as an anticonvulsant drug candidateQ34062044
GABAergic mechanisms in epilepsyQ34087973
Mechanism of chloride interaction with neurotransmitter:sodium symporters.Q34664153
GABAergic dysfunction in mood disorders.Q35187929
GABA, gamma-hydroxybutyric acid, and neurological diseaseQ35189066
Inhibition of gamma-aminobutyric acid uptake: anatomy, physiology and effects against epileptic seizuresQ35581505
The GABA-glutamate connection in schizophrenia: which is the proximate cause?Q35903154
The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methodsQ35914038
Identification of a chloride ion binding site in Na+/Cl -dependent transporters.Q35921659
Cloning and characterization of a functional human gamma-aminobutyric acid (GABA) transporter, human GAT-2.Q40133028
Elucidating conformational changes in the gamma-aminobutyric acid transporter-1.Q42554749
The mechanism of a neurotransmitter:sodium symporter--inward release of Na+ and substrate is triggered by substrate in a second binding siteQ42909481
Engineered Zn(2+) switches in the gamma-aminobutyric acid (GABA) transporter-1. Differential effects on GABA uptake and currentsQ43723442
Correlation between anticonvulsant activity and inhibitory action on glial gamma-aminobutyric acid uptake of the highly selective mouse gamma-aminobutyric acid transporter 1 inhibitor 3-hydroxy-4-amino-4,5,6,7-tetrahydro-1,2-benzisoxazole and its N-Q44072243
Intracellular domains of a rat brain GABA transporter that govern transport.Q44854900
Transmembrane domains I and II of the gamma-aminobutyric acid transporter GAT-4 contain molecular determinants of substrate specificityQ44904916
P433issue7
P304page(s)986-1000
P577publication date2010-07-01
P1433published inChemMedChemQ2962252
P1476titleHomology modelling of the GABA transporter and analysis of tiagabine binding
P478volume5

Reverse relations

cites work (P2860)
Q41439937A binding mode hypothesis of tiagabine confirms liothyronine effect on γ-aminobutyric acid transporter 1 (GAT1)
Q27300859A steered molecular dynamics study of binding and translocation processes in the GABA transporter
Q42605543An acidic amino acid transmembrane helix 10 residue conserved in the neurotransmitter:sodium:symporters is essential for the formation of the extracellular gate of the γ-aminobutyric acid (GABA) transporter GAT-1.
Q39768840An historical perspective on GABAergic drugs
Q86938754Development of Highly Potent GAT1 Inhibitors: Synthesis of Nipecotic Acid Derivatives by Suzuki-Miyaura Cross-Coupling Reactions
Q51167808Development of Highly Potent GAT1 Inhibitors: Synthesis of Nipecotic Acid Derivatives with N-Arylalkynyl Substituents.
Q48144959Development of Non-GAT1-Selective Inhibitors: Challenges and Achievements
Q88679493Development of Positron Emission Tomography Radiotracers for the GABA Transporter 1
Q40068020Different Binding Modes of Small and Large Binders of GAT1.
Q45093894Evidence for a Revised Ion/Substrate Coupling Stoichiometry of GABA Transporters
Q61805435GRID-independent molecular descriptor analysis and molecular docking studies to mimic the binding hypothesis of γ-aminobutyric acid transporter 1 (GAT1) inhibitors
Q34769682Homology modeling of human γ-butyric acid transporters and the binding of pro-drugs 5-aminolevulinic acid and methyl aminolevulinic acid used in photodynamic therapy
Q90028050Immunomodulatory Action of Substituted 1,3,4-Thiadiazines on the Course of Myocardial Infarction
Q42143662Inhibitory action of antidepressants on mouse Betaine/GABA transporter (BGT1) heterologously expressed in cell cultures
Q60953415Modeling and Simulation of GAT1: A Mechanistic Investigation of the GABA Transport Process
Q55665570Pairwise structural comparison of tiagabine analogs gives new insights into their protein binding modes.
Q46111785Revised Ion/Substrate Coupling Stoichiometry of GABA Transporters
Q41074219Sodium-assisted formation of binding and traverse conformations of the substrate in a neurotransmitter sodium symporter model
Q58750861Structure, Function, and Modulation of γ-Aminobutyric Acid Transporter 1 (GAT1) in Neurological Disorders: A Pharmacoinformatic Prospective
Q38572969Structure-activity relationship studies of citalopram derivatives: examining substituents conferring selectivity for the allosteric site in the 5-HT transporter

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