| scholarly article | Q13442814 |
| P356 | DOI | 10.1021/JP1000545 |
| P953 | full work available online at | https://pubs.acs.org/doi/pdf/10.1021/jp1000545 |
| P698 | PubMed publication ID | 20687526 |
| P50 | author | Souvik Maiti | Q18217615 |
| P2093 | author name string | Hemant Suryawanshi | |
| Harshana Sabharwal | |||
| P2860 | cites work | Journal of Molecular Biology | Q925779 |
| RNA architecture dictates the conformations of a bound peptide | Q27619503 | ||
| Anchoring an extended HTLV-1 Rex peptide within an RNA major groove containing junctional base triples | Q27621035 | ||
| Solution structure of a bovine immunodeficiency virus Tat-TAR peptide-RNA complex | Q27729342 | ||
| The structure of the human immunodeficiency virus type-1 TAR RNA reveals principles of RNA recognition by Tat protein | Q27729629 | ||
| Structural basis of ligand discrimination by two related RNA aptamers resolved by NMR spectroscopy | Q27732779 | ||
| Alpha helix-RNA major groove recognition in an HIV-1 rev peptide-RRE RNA complex | Q27733230 | ||
| Molecular recognition in the bovine immunodeficiency virus Tat peptide-TAR RNA complex | Q27733418 | ||
| Deep penetration of an alpha-helix into a widened RNA major groove in the HIV-1 rev peptide-RNA aptamer complex | Q27734070 | ||
| Solution structure of the HIV-2 TAR-argininamide complex | Q27736784 | ||
| Solution structure of P22 transcriptional antitermination N peptide–box B RNA complex | Q27748927 | ||
| RNA recognition: towards identifying determinants of specificity | Q29618287 | ||
| Themes in RNA-protein recognition. | Q30323241 | ||
| Thermodynamic profiling of HIV RREIIB RNA-zinc finger interactions | Q33489159 | ||
| Thermodynamics of aminoglycoside-rRNA recognition: the binding of neomycin-class aminoglycosides to the A site of 16S rRNA. | Q34132719 | ||
| Ligand-induced changes in 2-aminopurine fluorescence as a probe for small molecule binding to HIV-1 TAR RNA | Q34366015 | ||
| Arginine-rich motifs present multiple interfaces for specific binding by RNA. | Q34366716 | ||
| Calculating thermodynamic data for transitions of any molecularity from equilibrium melting curves | Q36472087 | ||
| Specific binding of arginine to TAR RNA | Q36918014 | ||
| Thermodynamic extent of counterion release upon binding oligolysines to single-stranded nucleic acids | Q37742304 | ||
| Macromolecules and water: probing with osmotic stress | Q38300278 | ||
| Parsing free energies of drug-DNA interactions. | Q38309315 | ||
| Thermodynamics of specific and non-specific DNA binding by the c-myb DNA-binding domain | Q38338324 | ||
| Fluorescence-based approach for detecting and characterizing antibiotic-induced conformational changes in ribosomal RNA: comparing aminoglycoside binding to prokaryotic and eukaryotic ribosomal RNA sequences. | Q38343538 | ||
| Tat is required for efficient HIV-1 reverse transcription | Q38347693 | ||
| Coupling of drug protonation to the specific binding of aminoglycosides to the A site of 16 S rRNA: elucidation of the number of drug amino groups involved and their identities | Q38357489 | ||
| Thermodynamic analysis of ion effects on the binding and conformational equilibria of proteins and nucleic acids: the roles of ion association or release, screening, and ion effects on water activity | Q39750512 | ||
| RNA recognition: a family matter? | Q40910413 | ||
| Sequence-specific recognition of RNA hairpins by bacteriophage antiterminators requires a conserved arginine-rich motif | Q43418894 | ||
| High affinity binding of TAR RNA by the human immunodeficiency virus type-1 tat protein requires base-pairs in the RNA stem and amino acid residues flanking the basic region | Q43480910 | ||
| 16 Analysis of equilibrium and kinetic measurements to determine thermodynamic origins of stability and specificity and mechanism of formation of site-specific complexes between proteins and helical DNA | Q44249816 | ||
| Differential modes of recognition in N peptide-boxB complexes | Q44432025 | ||
| Analysis of arginine-rich peptides from the HIV Tat protein reveals unusual features of RNA-protein recognition | Q44540333 | ||
| Achieving Specificity in Selected and Wild-Type N Peptide−RNA Complexes: The Importance of Discrimination against Noncognate RNA Targets | Q44641227 | ||
| Ion effects on ligand-nucleic acid interactions | Q46833485 | ||
| Specific and non-specific interactions of integration host factor with DNA: thermodynamic evidence for disruption of multiple IHF surface salt-bridges coupled to DNA binding | Q52543342 | ||
| Limiting Laws and Counterion Condensation in Polyelectrolyte Solutions I. Colligative Properties | Q55983575 | ||
| Thermodynamics of single-stranded RNA and DNA interactions with oligolysines containing tryptophan. Effects of base composition | Q64389786 | ||
| Thermodynamics of single-stranded RNA binding to oligolysines containing tryptophan | Q67542996 | ||
| Conformation of the TAR RNA-Arginine Complex by NMR Spectroscopy | Q68188961 | ||
| Hydrostatic and osmotic pressure as tools to study macromolecular recognition | Q70828912 | ||
| A highly salt-dependent enthalpy change for Escherichia coli SSB protein-nucleic acid binding due to ion-protein interactions | Q71028758 | ||
| Salt-dependent conformational transitions in the self-complementary deoxydodecanucleotide d(CGCAATTCGCG): evidence for hairpin formation | Q71731947 | ||
| NMR structure of the bacteriophage lambda N peptide/boxB RNA complex: recognition of a GNRA fold by an arginine-rich motif | Q74502190 | ||
| Characterization of the solution conformations of unbound and Tat peptide-bound forms of HIV-1 TAR RNA | Q78087931 | ||
| A thermodynamic signature for drug-DNA binding mode | Q83859402 | ||
| P433 | issue | 34 | |
| P407 | language of work or name | English | Q1860 |
| P921 | main subject | thermodynamics | Q11473 |
| P304 | page(s) | 11155-11163 | |
| P577 | publication date | 2010-09-01 | |
| 2010-09-02 | |||
| P1433 | published in | Journal of Physical Chemistry B | Q668669 |
| P1476 | title | Thermodynamics of Peptide−RNA Recognition: The Binding of a Tat Peptide to TAR RNA | |
| P478 | volume | 114 |
| Q97523694 | A Loop-Based and AGO-Incorporated Virtual Screening Model Targeting AGO-Mediated miRNA-mRNA Interactions for Drug Discovery to Rescue Bone Phenotype in Genetically Modified Mice |
| Q34244067 | Applications of isothermal titration calorimetry in pure and applied research--survey of the literature from 2010. |
| Q39034008 | Artificial nucleobase-amino acid conjugates: a new class of TAR RNA binding agents |
| Q38833059 | Attenuating HIV Tat/TAR-mediated protein expression by exploring the side chain length of positively charged residues. |
| Q37231014 | Biochemical Methods To Investigate lncRNA and the Influence of lncRNA:Protein Complexes on Chromatin |
| Q47725990 | Biophysical insight into the heparin-peptide interaction and its modulation by a small molecule. |
| Q34160290 | Click dimers to target HIV TAR RNA conformation |
| Q33741058 | Comparative analyses of the thermodynamic RNA binding signatures of different types of RNA recognition motifs |
| Q41159138 | Deciphering structure-activity relationships in a series of Tat/TAR inhibitors. |
| Q37518644 | Dynamic interactions of the HIV-1 Tat with nucleic acids are critical for Tat activity in reverse transcription. |
| Q43719108 | Effect of different arginine methylations on the thermodynamics of Tat peptide binding to HIV-1 TAR RNA |
| Q36788071 | Multivalent Amino Sugars to Recognize Different TAR RNA Conformations. |
| Q102058902 | Native mass spectrometry reveals the initial binding events of HIV-1 rev to RRE stem II RNA |
| Q38318269 | Salt bridge exchange binding mechanism between streptavidin and its DNA aptamer – thermodynamics and spectroscopic evidences |
| Q37688637 | Sensitivities to parameterization in the size-modified Poisson-Boltzmann equation |
| Q33997066 | Specificity of RSG-1.2 Peptide Binding to RRE-IIB RNA Element of HIV-1 over Rev Peptide Is Mainly Enthalpic in Origin |
| Q48285475 | Superior HIV-1 TAR Binders with Conformationally Constrained R52 Arginine Mimics in the Tat(48-57) Peptide. |
| Q42157411 | The RNA annealing mechanism of the HIV-1 Tat peptide: conversion of the RNA into an annealing-competent conformation |
| Q35023253 | The effect of N-acetylation and N-methylation of lysine residue of Tat peptide on its interaction with HIV-1 TAR RNA. |
| Q42010727 | Thermodynamic studies of a series of homologous HIV-1 TAR RNA ligands reveal that loose binders are stronger Tat competitors than tight ones. |
| Q36711096 | Thermodynamics of Rev-RNA interactions in HIV-1 Rev-RRE assembly. |
Search more.