Biology of a widespread uncultivated archaeon that contributes to carbon fixation in the subsurface (scientific article published on 26 November 2014)

Coupling genetic and chemical microbiome profiling reveals heterogeneity of archaeome and bacteriome in subsurface biofilms that are dominated by the same archaeal species

Q28540123

Membrane lipid patterns typify distinct anaerobic methanotrophic consortia

Q28770156

UniRef: comprehensive and non-redundant UniProt reference clusters

Q29614376

MicroScope--an integrated microbial resource for the curation and comparative analysis of genomic and metabolic data

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Archaea predominate among ammonia-oxidizing prokaryotes in soils

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Lineages of acidophilic archaea revealed by community genomic analysis

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Ecology and microbial structures of archaeal/bacterial strings-of-pearls communities and archaeal relatives thriving in cold sulfidic springs

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Metagenome and mRNA expression analyses of anaerobic methanotrophic archaea of the ANME-1 group

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Ammonia-oxidizing archaea use the most energy-efficient aerobic pathway for CO2 fixation

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A single peroxisomal targeting signal mediates matrix protein import in diatoms

Q34038216

A hydrogen-based subsurface microbial community dominated by methanogens.

Q34109933

Autotrophic carbon fixation in archaea.

Q34114312

IDBA-UD: a de novo assembler for single-cell and metagenomic sequencing data with highly uneven depth

Q34229322

New insights into the lifestyle of the cold-loving SM1 euryarchaeon: natural growth as a monospecies biofilm in the subsurface

Q34316005

Tackling the minority: sulfate-reducing bacteria in an archaea-dominated subsurface biofilm

Q34487668

Adaptive mutations in bacteria: high rate and small effects

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Global phylogenomic analysis disentangles the complex evolutionary history of DNA replication in archaea

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Acquisition of 1,000 eubacterial genes physiologically transformed a methanogen at the origin of Haloarchaea

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Diversity of archaeal type IV pilin-like structures

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Extraordinary phylogenetic diversity and metabolic versatility in aquifer sediment.

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Cyanobacterial NDH-1 complexes: novel insights and remaining puzzles

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Phylogeny and evolution of the Archaea: one hundred genomes later

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Energy conservation via electron bifurcating ferredoxin reduction and proton/Na(+) translocating ferredoxin oxidation

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Archaea in biogeochemical cycles

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Developmental regulation of the cell division protein FtsZ in Anabaena sp. strain PCC 7120, a cyanobacterium capable of terminal differentiation

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Gene and translation initiation site prediction in metagenomic sequences

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The unique structure of archaeal 'hami', highly complex cell appendages with nano-grappling hooks

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Fructose 1,6-bisphosphate aldolase/phosphatase may be an ancestral gluconeogenic enzyme

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Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models

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Estimation of genome sizes of hyperthermophiles

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Fermentation, hydrogen, and sulfur metabolism in multiple uncultivated bacterial phyla

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In situ growth of the novel SM1 euryarchaeon from a string-of-pearls-like microbial community in its cold biotope, its physical separation and insights into its structure and physiology

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Intact polar membrane lipids in prokaryotes and sediments deciphered by high-performance liquid chromatography/electrospray ionization multistage mass spectrometry--new biomarkers for biogeochemistry and microbial ecology.

Q44820864

Tetrahydrofolate-specific enzymes in Methanosarcina barkeri and growth dependence of this methanogenic archaeon on folic acid or p-aminobenzoic acid

Q45045280

Hydrologic significance of carbon monoxide concentrations in ground water.

Q51015080

Three-dimensional analysis of the structure and ecology of a novel, ultra-small archaeon.

Q51181885

A marine microbial consortium apparently mediating anaerobic oxidation of methane

Q56674976

Intact polar lipids of anaerobic methanotrophic archaea and associated bacteria

Q57092676

Zero-valent sulphur is a key intermediate in marine methane oxidation

Q57118041

Integrated metagenomic and metaproteomic analyses of an ANME-1-dominated community in marine cold seep sediments

Q58806341

Methane-Consuming Archaea Revealed by Directly Coupled Isotopic and Phylogenetic Analysis

Q59820853

Application of two new LC–ESI–MS methods for improved detection of intact polar lipids (IPLs) in environmental samples

Q59920841

Systematic fragmentation patterns of archaeal intact polar lipids by high-performance liquid chromatography/electrospray ionization ion-trap mass spectrometry

Q59920953

Requirement of nickel metabolism proteins HypA and HypB for full activity of both hydrogenase and urease in Helicobacter pylori

Q73312877

P407

language of work or name

English

Q1860

P921

main subject

carbon fixation

Q901921

P304

page(s)

5497

P577

publication date

2014-11-26

P1433

published in

Nature Communications

Q573880

P1476

title

Biology of a widespread uncultivated archaeon that contributes to carbon fixation in the subsurface

P478

volume

Reverse relations

cites work (P2860)

Q35845524	"Altiarchaeales": uncultivated archaea from the subsurface.
Q91713005	An archaeal symbiont-host association from the deep terrestrial subsurface
Q92867278	Archaeal Cell Walls
Q41037073	Archaeal Diversity and CO2 Fixers in Carbonate-/Siliciclastic-Rock Groundwater Ecosystems
Q90879981	Archaeal biofilm formation
Q64448582	Archaeal cell surface biogenesis
Q51152988	Comparative genomic inference suggests mixotrophic lifestyle for Thorarchaeota
Q36067942	ConsPred: a rule-based (re-)annotation framework for prokaryotic genomes
Q64102335	Contrasting Pathways for Anaerobic Methane Oxidation in Gulf of Mexico Cold Seep Sediments
Q27324178	Culture Independent Genomic Comparisons Reveal Environmental Adaptations for Altiarchaeales
Q40603494	Cytochromes c in Archaea: distribution, maturation, cell architecture, and the special case of Ignicoccus hospitalis.
Q47696870	Differential depth distribution of microbial function and putative symbionts through sediment-hosted aquifers in the deep terrestrial subsurface.
Q31155577	Discovery of anaerobic lithoheterotrophic haloarchaea, ubiquitous in hypersaline habitats
Q94522053	Diversity, ecology and evolution of Archaea
Q49873995	Evolutionary history of carbon monoxide dehydrogenase/acetyl-CoA synthase, one of the oldest enzymatic complexes
Q52370288	Genome-reconstruction for eukaryotes from complex natural microbial communities.
Q61799164	Genomic diversity, lifestyles and evolutionary origins of DPANN archaea
Q38629820	Genomic exploration of the diversity, ecology, and evolution of the archaeal domain of life
Q45997703	Genomic resolution of a cold subsurface aquifer community provides metabolic insights for novel microbes adapted to high CO2 concentrations.
Q37072985	Genomics-informed isolation and characterization of a symbiotic Nanoarchaeota system from a terrestrial geothermal environment
Q97587588	Groundwater Elusimicrobia are metabolically diverse compared to gut microbiome Elusimicrobia and some have a novel nitrogenase paralog
Q64097731	Hydrogenotrophic methanogenesis in archaeal phylum Verstraetearchaeota reveals the shared ancestry of all methanogens
Q90589380	Lipid analysis of CO2-rich subsurface aquifers suggests an autotrophy-based deep biosphere with lysolipids enriched in CPR bacteria
Q92397438	Metabolic Potential of As-yet-uncultured Archaeal Lineages of Candidatus Hydrothermarchaeota Thriving in Deep-sea Metal Sulfide Deposits
Q34465065	Metagenomic analysis of a high carbon dioxide subsurface microbial community populated by chemolithoautotrophs and bacteria and archaea from candidate phyla
Q26748830	Methanogenesis and the Wood-Ljungdahl Pathway: An Ancient, Versatile, and Fragile Association
Q35641222	New perspectives on microbial community distortion after whole-genome amplification
Q30847974	Novel Large Sulfur Bacteria in the Metagenomes of Groundwater-Fed Chemosynthetic Microbial Mats in the Lake Huron Basin
Q92157088	Novel insights into plant-associated archaea and their functioning in arugula (Eruca sativa Mill.).
Q41077707	Potential for microbial H2 and metal transformations associated with novel bacteria and archaea in deep terrestrial subsurface sediments.
Q33654535	RNA-Dependent Cysteine Biosynthesis in Bacteria and Archaea.
Q35699837	S-layers at second glance? Altiarchaeal grappling hooks (hami) resemble archaeal S-layer proteins in structure and sequence
Q51146477	Studying microbial functionality within the gut ecosystem by systems biology
Q38640964	The growing tree of Archaea: new perspectives on their diversity, evolution and ecology
Q26800168	The universal tree of life: an update
Q98281016	Undinarchaeota illuminate DPANN phylogeny and the impact of gene transfer on archaeal evolution
Q46250170	Versatile cell surface structures of archaea.

P819	ADS bibcode	2014NatCo...5.5497P
P356	DOI	10.1038/NCOMMS6497
P698	PubMed publication ID	25425419
P5875	ResearchGate publication ID	268873260